Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00707
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    29   0.067
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   1.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 28.7 bits (61), Expect = 0.067
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 561 LFRDIPSLGHFYMSPWGSLPACIAGLTVDIWSILPREKPWETHTSDGSTNYFTFCV 728
           LF+      + YM     + AC+ G   ++W++L R+K    H  DG+T ++T CV
Sbjct: 431 LFKTFKDRKYLYML----MEACLGG---ELWTVL-RDKG---HFDDGTTRFYTACV 475


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -2

Query: 452 IGTAFLLNLARIIVKIAASMDICMSTAIYHVGNKQNLSGSTRLLMKNACAQNFSRQILLC 273
           I T  L ++    V   A+ D+ +  A+        L+G T  L    C    S  ILLC
Sbjct: 63  ITTRRLRSVTNCFVSSLAAADLLVGLAVMPPAVLLQLTGGTWELGPMLCDSWVSLDILLC 122

Query: 272 SAT 264
           +A+
Sbjct: 123 TAS 125


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 627 IAGLTVDIWSILPREKPWETHTSDGSTNYFTF 722
           I G+T DI S++ +E+P  T T      +F+F
Sbjct: 479 IGGITRDISSLVVQEQPTPT-TESEERRFFSF 509


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 710 LFYILCIPILVGW 748
           L +++C P LVGW
Sbjct: 192 LSFVICFPPLVGW 204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,714
Number of Sequences: 438
Number of extensions: 6633
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)