Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00706
(626 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 290 2e-77
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 270 2e-71
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 206 3e-52
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 160 2e-38
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 154 1e-36
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 110 2e-23
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 3e-23
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 110 3e-23
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 106 5e-22
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 98 1e-19
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 95 1e-18
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 95 2e-18
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 84 3e-15
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 83 5e-15
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 81 2e-14
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 80 4e-14
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 7e-14
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 77 3e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 74 2e-12
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 73 7e-12
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 71 2e-11
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 67 4e-10
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 64 2e-09
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 63 5e-09
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 59 7e-08
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 53 5e-06
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 53 6e-06
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 52 9e-06
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 51 2e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 51 3e-05
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 50 3e-05
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 50 6e-05
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 48 2e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 47 4e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 47 4e-04
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 47 4e-04
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 46 0.001
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 46 0.001
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 45 0.002
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 44 0.004
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 44 0.004
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.007
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 42 0.012
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.012
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 41 0.021
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 41 0.021
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 40 0.065
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 40 0.065
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 39 0.085
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 39 0.11
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 38 0.20
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.20
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.20
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 38 0.26
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 38 0.26
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 37 0.34
UniRef50_Q8SW00 Cluster: Putative uncharacterized protein ECU03_... 37 0.34
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 37 0.45
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 37 0.45
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 36 0.60
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 0.79
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 1.1
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A2EFB4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 5.6
UniRef50_Q6UAD4 Cluster: Olfactory receptor 127; n=4; Theria|Rep... 32 9.8
UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1; Rh... 32 9.8
UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 9.8
UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 290 bits (711), Expect = 2e-77
Identities = 133/164 (81%), Positives = 150/164 (91%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
VHFRDPY++K RKELFI P+ ++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NRA
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRA 164
Score = 68.9 bits (161), Expect = 9e-11
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYKVKRN WP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKVKRNSWPKVRGVA 203
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 270 bits (662), Expect = 2e-71
Identities = 125/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 206 bits (503), Expect = 3e-52
Identities = 103/164 (62%), Positives = 123/164 (75%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPYK+K R E FI + +YTGQF+YCGKKA L++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI---------------------- 98
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NRA
Sbjct: 99 --RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRA 140
Score = 70.1 bits (164), Expect = 4e-11
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKP+LKAGRAYHKYK KRNCWP VRGVA
Sbjct: 148 GGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVA 179
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 160 bits (389), Expect = 2e-38
Identities = 72/114 (63%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
Frame = +2
Query: 146 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNV 322
+G+VK I HDPGRGAPLA V FR+P ++ KELFI + LY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 323 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 484
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 154 bits (374), Expect = 1e-36
Identities = 75/123 (60%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 203 VHFRDPYKFKTRKELFIVPKLYTG-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FR P++FK +KELF+ ++ T +YCGKKATL VGNV+P+ ++PEG + +
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHV 120
Query: 380 GDR 388
G R
Sbjct: 121 GYR 123
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 110 bits (265), Expect = 2e-23
Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 203 VHFRDPYKFKTRKELFI-VPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
+ F FK EL+I V KLY + + CG +A GNV+P+ +P G VCN+EEK
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+LAR++G F V+ H+ T++KLPS K+L S RA
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRA 190
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVR 617
GG+ +KP+LKAG+ Y+K+K +P V+
Sbjct: 198 GGKYEKPLLKAGKNYYKFKSLNKKYPIVK 226
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 3e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 215 DPYKFKTRK 241
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 110 bits (264), Expect = 3e-23
Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 200 VVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
+ + +F + LY GQ V GK A+ + GN+M +G +PEGT++ N+E++
Sbjct: 57 KIVTENGVEFFN----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRA 112
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+ ARA G +A VIG P+ +T ++LPSG + S RA
Sbjct: 113 GDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRA 156
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRI+KP LKAG+ YH+ + K +P VRG A
Sbjct: 164 GGRIEKPFLKAGKKYHRARAKAWKYPTVRGKA 195
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 106 bits (254), Expect = 5e-22
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 200 VVHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 376
V F D + L +VP+ G + CG A ++ GN +P+ +PEG + N+E +
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQ 115
Query: 377 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+ ARA G +AT+I H D RT V+LPSG + RA
Sbjct: 116 PGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRA 158
Score = 39.5 bits (88), Expect = 0.065
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GG+ +KP +KAG+ Y+ + K WP VRGVA
Sbjct: 166 GGKREKPFVKAGKKYYHMRSKGGKWPKVRGVA 197
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 98.3 bits (234), Expect = 1e-19
Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 200 VVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V D +F + +Y GQ + G A E GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEFL----MPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRP 112
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+LAR +G++A V+G +T ++LPSG K +P+ +RA
Sbjct: 113 GDGGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPNDSRA 154
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 534 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GRI+KPI+KAG AYHK+KVK WP VRGVA
Sbjct: 163 GRIEKPIMKAGFAYHKWKVKARKWPRVRGVA 193
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 95.1 bits (226), Expect = 1e-18
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 200 VVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
++ D KF V L GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 56 LIKLDDGTKFYVPS----VQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTR 111
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+ AR++G + V+G D + VKL S + S+ RA
Sbjct: 112 GDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARA 153
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GG +KP+LKAG Y KYKVK WP+VRGVA
Sbjct: 161 GGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVA 192
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 94.7 bits (225), Expect = 2e-18
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58
Query: 203 VHFRDPYKFKTRKELFIVPK--LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 376
V F+ +ELF++ + G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
Query: 377 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
D G+ R+SG +ATV+ H +A RT V +PSG K L RA
Sbjct: 113 PNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRA 155
Score = 37.9 bits (84), Expect = 0.20
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 534 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GR+D+P LKAG+ YHK K + +P V VA
Sbjct: 164 GRVDRPWLKAGKKYHKMKTRAAKYPRVSAVA 194
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 83.8 bits (198), Expect = 3e-15
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 196
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 197 AVVHFRDPYKFKTRKELFIVPKLY---TGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNL 367
A V F D + VP + G+ + G K+ +E GNV+ + +P+GTIVCN+
Sbjct: 58 AKVRFEDG-------SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNI 110
Query: 368 EEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
E+ GD G + +++G ATV H + VKLPSG L NRA
Sbjct: 111 EKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRA 156
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 83.0 bits (196), Expect = 5e-15
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Frame = +2
Query: 83 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVP 259
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ E
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKEDDCMVPASE----- 66
Query: 260 KLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 439
+YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 67 GMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHR 126
Query: 440 PDAKRTRVKLPSGAKKVLPSSNR 508
+ T +K+PSG K + S R
Sbjct: 127 KETNETVIKIPSGKKLTVSSECR 149
Score = 36.7 bits (81), Expect = 0.45
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GG DKP+LKA A++K K + + +P VRGVA
Sbjct: 158 GGIHDKPLLKASVAHYKAKARGHVFPRVRGVA 189
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 81.0 bits (191), Expect = 2e-14
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 200 VVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
+ + F + +YTGQ V G A GN++P+ A+PEGT + N+E +
Sbjct: 61 HIVIPNVADFW----IPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRP 116
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+LAR+ G +A ++G + ++ ++LPSG K + + RA
Sbjct: 117 GDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARA 158
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 534 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GR +KP+LKAG AY+K+K K WP VRGVA
Sbjct: 167 GRDEKPLLKAGNAYYKWKAKAKKWPVVRGVA 197
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 80.2 bits (189), Expect = 4e-14
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +2
Query: 23 MGRV-IRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 196
MG+V + QR+G GS F S T + G K+ + D G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 197 AVVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 376
VV + + + L I G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENGAQSLLPAPLGIS----VGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENN 112
Query: 377 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G+L RASG+FA ++ D + V+LPSG K L ++ RA
Sbjct: 113 PGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARA 155
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 623
GGR +KP +KAG Y+ + WP V GV
Sbjct: 163 GGRKEKPFVKAGNKYYWASSRNRHWPVVNGV 193
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 160
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 77.4 bits (182), Expect = 3e-13
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 199
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 200 VVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
+ F D L G + G K+ + GNV+ V +P+GT VCN+E+
Sbjct: 58 KIRFEDGIVSYVPAVL----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHY 113
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GD G + +++G ATV H +KLPSG L NRA
Sbjct: 114 GDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRA 155
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 74.1 bits (174), Expect = 2e-12
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Frame = +2
Query: 38 RAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 217
+A R G + H K K R +D+ + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 218 PYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 397
K + + + G + + A ++VGN P+ +PEGT++ N+E K G G++
Sbjct: 100 GEK----RYILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQM 155
Query: 398 ARASGNFATVIGHNPDAKRTRVKLPSG-AKKVL 493
AR++G ++G + D K ++L SG +KVL
Sbjct: 156 ARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 72.5 bits (170), Expect = 7e-12
Identities = 52/155 (33%), Positives = 75/155 (48%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 203 VHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 382
+ D K + F Y GQ + G T+ G + +P+G+ V N+E G
Sbjct: 52 LELVDSTGKKVYQIAFT--GAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPG 109
Query: 383 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 487
D G R++G FA V+ H R +KLPSG+ +
Sbjct: 110 DGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMR 141
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 71.3 bits (167), Expect = 2e-11
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Frame = +2
Query: 41 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 215 DPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 391
D K + PK L G V G +A ++VGN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 392 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
+LAR++G A ++G + K V+L SG +++ ++RA
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLLTSRA 190
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 66.9 bits (156), Expect = 4e-10
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Frame = +2
Query: 50 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 223
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 224 KFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 400
K + P+ G + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 401 RASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
RA+G A +I + K +KLPSG +++
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLI 182
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +2
Query: 110 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVP-KLYTGQFVY 286
R +D+ R + G V+ + +DP R A +A++ + D + P +L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 287 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 466
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 467 LPSGAKKVL 493
L SG ++++
Sbjct: 176 LNSGEQRLV 184
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 38 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 215 DPYKFKTRKELFIVPKLYT-GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 391
Y+ + P T G + G ++ ++VGN +P+ +P T + N+E G G
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGG 178
Query: 392 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
+L R++G+ AT++ D V+LPSG ++++
Sbjct: 179 QLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLV 212
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 59.3 bits (137), Expect = 7e-08
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Frame = +2
Query: 38 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
+ + + G++ H + G KL R +D+ + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 215 DPYK----FKTRKELFIVPKLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKM 379
D K + ++ + + GK ++ GN MP+ +PEGTIV N+E
Sbjct: 114 DGEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIP 173
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
G G++ARA+G +A V+G + V++PSG +++
Sbjct: 174 GKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMI 211
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +2
Query: 311 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 490
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 491 LPSSNRA 511
+ S RA
Sbjct: 419 IDSRCRA 425
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 52.8 bits (121), Expect = 6e-06
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = +2
Query: 47 RKGAGSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 223
R G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 224 KFKTRKELFIVPK-LYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 397
K I P + G + + ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 398 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
AR++G++A ++G + K ++L SG + RA
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSGETRKFLKECRA 198
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 52.4 bits (120), Expect = 9e-06
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Frame = +2
Query: 47 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 220
R +G V V H R G K +R +D+A R VV+ I HDPGR A +A+V ++
Sbjct: 108 RNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQET 163
Query: 221 YKFK-------------TRKELFIVPK-LYT--GQFVYCGKKA--TLEVGNVMPVGAMPE 346
K + +P+ L+ G V G A T GN +P+ MP
Sbjct: 164 KKLSYILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLHMMPV 223
Query: 347 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 224 GTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 KLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GH 436
+L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +I H
Sbjct: 203 QLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKH 262
Query: 437 NPDAKRTRVKLPSGAKKVLP 496
N K ++LPSG K P
Sbjct: 263 N---KYAILRLPSGELKSFP 279
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +2
Query: 305 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 478
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 50.4 bits (115), Expect = 3e-05
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Frame = +2
Query: 50 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 229
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK- 75
Query: 230 KTRKELFIVPKLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARA 406
+ + L FV K +L GN + + GT++ +E G +R+
Sbjct: 76 ---RYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSRS 132
Query: 407 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRAWSVLLLRWTY*QTYFES----WKGI 574
SG+ + +I D K +KLPSG KK + + A + + + +++ W+GI
Sbjct: 133 SGSESEII--FKDNKFGVIKLPSGIKKKISLNCMATIGKICTFNVKKKLYKAGQNRWRGI 190
Query: 575 -PQVQG 589
P V+G
Sbjct: 191 RPTVRG 196
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 49.6 bits (113), Expect = 6e-05
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = +2
Query: 80 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 253
T+ + G K R +D+ I V+ I +DP R A +A+V +RD R+ +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG----ERRYIVA 112
Query: 254 VPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 433
L G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 113 PAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA 172
Query: 434 HNPDAKRTRVK 466
+ R++
Sbjct: 173 KEGEYATLRMR 183
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = -2
Query: 391 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVE-LRDNEELLPCLELVWI 215
T++TH + +AHNGTL S R +I+N + L+TI++L V L +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 214 AEVYNSQRCTSTRVMDYILNNSLDVSMTFSVI 119
AE +S+ + ++D + +++L+V++ + +
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAIPLAEV 98
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +2
Query: 311 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 490
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 491 LPSSNRA 511
+ S RA
Sbjct: 381 IDSRCRA 387
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 200 VVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEG 349
V+H + + + + +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 27 VIHAVPSWSCSHDEPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 308 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 487
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 488 VLPS 499
+ S
Sbjct: 353 AVDS 356
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 46.8 bits (106), Expect = 4e-04
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Frame = +2
Query: 41 AQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF-- 211
A R G + + H + A +L R +D+ +R+ + G V+ I +DP R + +A+V +
Sbjct: 23 AGRNSTGRITLFH--RGSHAKRLQRRIDF-QRNTSLTGKVERIEYDPNRSSWIALVRWYS 79
Query: 212 ---RDPYKFKTRKELFIVP--KLYTGQFVYCGKKA--TLE--VGNVMPVGAMPEGTIVCN 364
+ ++ + + +I+ K TG V + LE +GN + + +P GT++ N
Sbjct: 80 GSTQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHN 139
Query: 365 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
+E G + RA+G FA +I R++LPSGA + S RA
Sbjct: 140 IEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALASINSQCRA 186
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 46.8 bits (106), Expect = 4e-04
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Frame = +2
Query: 47 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 220
R+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 221 YK-FKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 397
K + + E + G + G A VGN P MP GT++ +E G G+
Sbjct: 100 DKGYISHPE-----GIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQS 154
Query: 398 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
ARA+G A + + +R LP G + +P + A
Sbjct: 155 ARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPA 190
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 311 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 490
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 491 LPSSNRA 511
+ + RA
Sbjct: 73 INAKCRA 79
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +2
Query: 308 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 487
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 488 VLPSSNRA 511
++ S RA
Sbjct: 417 LIDSRCRA 424
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 44.8 bits (101), Expect = 0.002
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Frame = +2
Query: 47 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 220
R G V V H R G K +R +D+A R +V+ I HDPGR A +A+V ++
Sbjct: 107 RNNTGRVTVRH---RGGGHKRRIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQET 162
Query: 221 YKFK-------------TRKELFIVPK-LYT--GQFVYCGKKA--TLEVGNVMPVGAMPE 346
K + + +P+ L+ G V G A T GN +P+ +P
Sbjct: 163 QKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPV 222
Query: 347 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 451
GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 223 GTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 43.6 bits (98), Expect = 0.004
Identities = 32/108 (29%), Positives = 50/108 (46%)
Frame = +2
Query: 152 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPV 331
+V +I+HD R A +A+V D K+ E + V G+ P+
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNEGDAYPL 169
Query: 332 GAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 475
GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 170 GALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 302 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 478
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSG 292
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRK 94
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 41.9 bits (94), Expect = 0.012
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = -2
Query: 553 IGLSIRPPQQQYRPCSVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHF 374
+G P + CS + W NLL R L IR+V++ + ++ + TSIT+
Sbjct: 56 MGAQEHPLWMKPNHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNV 115
Query: 373 LFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 266
+F + GT + ++ + FL+ N+LA V
Sbjct: 116 IFNVTDLGTFGSRAQGQNVIGNEGGFLTAANELARV 151
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 41.9 bits (94), Expect = 0.012
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -2
Query: 391 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVELRDNEELL 239
T +TH + +AHNGTL S R +I+N + L+ +++L V D +E L
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQL 69
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 41.1 bits (92), Expect = 0.021
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Frame = +2
Query: 110 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD---PYKFKTRKELFIVPKLYTGQF 280
R +D+ I G+V+ I +DP R A +A++ + D Y KT EL + K+ +
Sbjct: 37 RIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDKKYIIKT-NELEVSDKIISSL- 94
Query: 281 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 460
L+ GN + + GT++ E +G +R++G+ + +I N +
Sbjct: 95 ----NNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GI 148
Query: 461 VKLPSGAKKVLPSSNRAWSVLLLRWTY*QTYFES----WKGI-PQVQG 589
+KL SG KK + + A + + + +++ WKGI P V+G
Sbjct: 149 IKLSSGIKKKISINCMATIGKICTFNLNKKLYKAGQNRWKGIRPTVRG 196
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 41.1 bits (92), Expect = 0.021
Identities = 33/111 (29%), Positives = 53/111 (47%)
Frame = +2
Query: 161 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAM 340
+II+D R LAV + + + L G + G KA L++GN +P+ +
Sbjct: 67 NIIYDSFRRIFLAVYFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYKI 126
Query: 341 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
G+ + N+E + +G L + + N +I D T VKLPSG K+L
Sbjct: 127 LLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLL 175
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 39.5 bits (88), Expect = 0.065
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +2
Query: 47 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 214
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 215 DPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 382
+ + T + P + G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 39.5 bits (88), Expect = 0.065
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 338 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLI 52
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 39.1 bits (87), Expect = 0.085
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +2
Query: 305 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 484
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 485 KVL 493
+ +
Sbjct: 280 RYI 282
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 38.7 bits (86), Expect = 0.11
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +2
Query: 146 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVY-CGKKATLEVGNV 322
K V+ + +D R A L ++F D K K +++ Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIY-TKDTYIGNIINRIDSKSEFRNGFR 131
Query: 323 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 478
+ + +P GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 132 LLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 37.9 bits (84), Expect = 0.20
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = +2
Query: 155 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVG 334
V ++ +DP R A +A+V + ++ E + V + + G+ P+G
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVIGRMAVSAKEGDAYPLG 136
Query: 335 AMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
A+P GT+V NLE + G RA+G ++
Sbjct: 137 ALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.20
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 293 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 436
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 37.5 bits (83), Expect = 0.26
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Frame = +2
Query: 47 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP- 220
R G + V H K +G KL R +D+ I VV+ + +DP R + +V++++
Sbjct: 41 RDNQGHITVYH--KERGHKKLYRLVDFYYLKD-IPYVVESLEYDPNRSGFINLVYYKNGI 97
Query: 221 YKFKTRKELFIVPKLYTGQFVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 394
Y F + + G C K L+ GN +P G+IV N+ ++ +
Sbjct: 98 YSF-----ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKAK 152
Query: 395 LARASGNFATVIGHNPDAKRTRVKLPS 475
R++G F ++ + VKLPS
Sbjct: 153 YLRSAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 37.5 bits (83), Expect = 0.26
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +2
Query: 152 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMP 328
+V +++ D R A +A+V D K+ E L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 329 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 475
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 37.1 bits (82), Expect = 0.34
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 239 KELFIVPKLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 418
K L I G +Y G+ L++GN++P+ +P G+ + N+E + S
Sbjct: 98 KYLPITKNTKEGDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKIS 157
Query: 419 ATVIGHNPDAKRTRVKLPSGAKKVL 493
A +I K +KLPSG ++L
Sbjct: 158 AFLI--YIGKKYVTIKLPSGEIRLL 180
>UniRef50_Q8SW00 Cluster: Putative uncharacterized protein
ECU03_1470; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU03_1470 - Encephalitozoon
cuniculi
Length = 161
Score = 37.1 bits (82), Expect = 0.34
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = -2
Query: 322 HISNFKSCFLSTINKLACVELRDNEELLPCLELVWIAEVYNSQRCTSTRVM 170
H S+ + F ST++++A ++ DNE L+ CLE+ + + C++T ++
Sbjct: 33 HSSDTQLYFYSTLHEIAMAQMLDNENLIDCLEVSLVEVPLKEELCSTTSLV 83
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 36.7 bits (81), Expect = 0.45
Identities = 24/92 (26%), Positives = 42/92 (45%)
Frame = +2
Query: 155 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVYCGKKATLEVGNVMPVG 334
V ++ +DP R A +A+V + ++ E + V + G+ P+G
Sbjct: 111 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAGDVIKTSAVIGRMAVSANEGDAYPLG 170
Query: 335 AMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
A+P GT+V NLE + G RA+G ++
Sbjct: 171 ALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 36.7 bits (81), Expect = 0.45
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Frame = +2
Query: 155 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVYCG--KKATLEVGNVMP 328
V I +DP R A +A+ K + V KL G + K+ L+VG
Sbjct: 57 VMRIEYDPNRSAHIALCSI---LKEGIYFYVISVAKLEVGSLIITSNLKQGILQVGYTTK 113
Query: 329 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 508
+ +PEG ++ N+E +L+RA+G + +I + K + VKL S +++ SN
Sbjct: 114 IKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLSSKECRLI--SNE 170
Query: 509 AWSVL 523
++ +
Sbjct: 171 CYATI 175
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 36.3 bits (80), Expect = 0.60
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 626 GNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSA 525
G+T + WPA+ L+LV+ + QN VN +TS+
Sbjct: 56 GHTPHAWPAIPLGLILVIGTAGLQNGLVNAATSS 89
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 35.9 bits (79), Expect = 0.79
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 472
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/123 (24%), Positives = 54/123 (43%)
Frame = +2
Query: 110 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPKLYTGQFVYC 289
R +DY I G V + +DP R + +A++ Y + L G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALI----VYSNGVMSYILAPEGLLVGDCIFA 99
Query: 290 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 469
+ L+ GN + +P G + ++E + RA+G++AT+I + K +KL
Sbjct: 100 KENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILKL 157
Query: 470 PSG 478
SG
Sbjct: 158 KSG 160
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 5.6
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 359 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 493
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_A2EFB4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 394
Score = 33.1 bits (72), Expect = 5.6
Identities = 18/82 (21%), Positives = 40/82 (48%)
Frame = -2
Query: 337 SSNRHHISNFKSCFLSTINKLACVELRDNEELLPCLELVWIAEVYNSQRCTSTRVMDYIL 158
++ R HI + +T+ L E+ +NE LLP E++ + + + + V+ +
Sbjct: 15 TAKRSHIEAMDALISTTLKFLTAAEIFENENLLPYSEILNMLQEQTKVQAEISNVLPLFI 74
Query: 157 NNSLDVSMTFSVI*RAKFRSAF 92
+N ++ + I R+ F++ F
Sbjct: 75 SNDVNSPTAYDAI-RSFFQNHF 95
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 5.6
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>UniRef50_Q6UAD4 Cluster: Olfactory receptor 127; n=4; Theria|Rep:
Olfactory receptor 127 - Mus musculus (Mouse)
Length = 323
Score = 32.3 bits (70), Expect = 9.8
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -3
Query: 543 QYVHLSNNTDHALLLDGRTFLAPDGSFTLVRLASGLCPI--TVAKFPEARARRPLSPIFS 370
Q + LS + D LL TF+A G V +A C I TV + P A R S +FS
Sbjct: 183 QLLKLSCSNDDFGLLKVSTFIAVMGFACFVGIAFSYCQIFSTVLRMPSAEGR---SKVFS 239
Query: 369 SRL-HTMVPSGIAPTGI 322
+ L H V S TGI
Sbjct: 240 TCLPHLFVVSFFLSTGI 256
>UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Glycosyl
transferase, family 2 - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 32.3 bits (70), Expect = 9.8
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +2
Query: 335 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
A+PE T +CNL E D+G +A A+G V G N + + R +L +G + LP + ++
Sbjct: 88 AVPEPTWLCNLSEAFKDQG-VAAATG---FVRGRNGISFQWRGRLVNGQSQTLPITTKS 142
>UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep:
MAP4K1 protein - Bos taurus (Bovine)
Length = 847
Score = 32.3 bits (70), Expect = 9.8
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 83 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 220
KKR A K+ + + G +G++ D++ +PG+GAP+ + DP
Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335
>UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 348
Score = 32.3 bits (70), Expect = 9.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 426 TVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVA 298
+VA PEA A P SP+FS R+ P P TFP S+++
Sbjct: 3 SVAYEPEALAFDP-SPLFSQRVQRWEPGASKPNPDTFPFSKIS 44
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,388,168
Number of Sequences: 1657284
Number of extensions: 14241294
Number of successful extensions: 38051
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 36829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38029
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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