Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00706
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   284   1e-78
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.6  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   4.5  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       24   4.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.0  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  284 bits (697), Expect = 1e-78
 Identities = 130/164 (79%), Positives = 148/164 (90%), Gaps = 1/164 (0%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
           V+FRDPY+F+  K+LFI  + +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK 
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKT 120

Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
           GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NRA
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRA 164



 Score = 72.9 bits (171), Expect = 8e-15
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
           GGRIDKPILKAGRAYHKYKVKRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKVKRNCWPKVRGVA 203


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 131 RHGYIKGVVKDIIHDP 178
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 131 RHGYIKGVVKDIIHDP 178
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 400 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 272
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
 Frame = -2

Query: 418 EVSRGTCQTTSI--THFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEL 260
           +V R   +TT I  THF FK  H         R     +  CF      + CV L
Sbjct: 172 DVLRTRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVAL 226


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 605 PAVTFDLVLVVCPSSFQNRFVNTSTSATIPTM 510
           P +     ++  P  F+N  +NT T+   P+M
Sbjct: 478 PNMAIKAAMLAYPDVFKNVLMNTLTTGQFPSM 509


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,690
Number of Sequences: 2352
Number of extensions: 15648
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)