Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00706
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 270 2e-72
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 270 2e-72
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 270 2e-72
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 270 3e-72
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 270 3e-72
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 270 3e-72
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 270 3e-72
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 270 3e-72
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 214 2e-55
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 195 1e-49
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.83
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.83
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 33 0.83
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 33 0.83
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (663), Expect = 2e-72
Identities = 126/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (663), Expect = 2e-72
Identities = 126/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (663), Expect = 2e-72
Identities = 126/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (662), Expect = 3e-72
Identities = 125/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 270 bits (662), Expect = 3e-72
Identities = 125/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (662), Expect = 3e-72
Identities = 125/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (662), Expect = 3e-72
Identities = 125/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 270 bits (662), Expect = 3e-72
Identities = 125/164 (76%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 379
V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 380 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 164
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 203
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 214 bits (523), Expect = 2e-55
Identities = 99/130 (76%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 215 DPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 391
DPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRG 120
Query: 392 RLARASGNFA 421
+LARASGN+A
Sbjct: 121 KLARASGNYA 130
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 195 bits (475), Expect = 1e-49
Identities = 90/118 (76%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
Frame = +2
Query: 161 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIVPK-LYTGQFVYCGKKATLEVGNVMPVGA 337
DIIHDPGRGAPLA V FRDPY+FK R ELFI + ++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 338 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRA 511
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NRA
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRA 118
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = +3
Query: 531 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVA 626
GGRIDKPILKAGRAYHKYK KRNCWP VRGVA
Sbjct: 126 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVA 157
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.83
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.83
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 33.1 bits (72), Expect = 0.83
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 214
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.1 bits (72), Expect = 0.83
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 430
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,302,298
Number of Sequences: 237096
Number of extensions: 2269517
Number of successful extensions: 4357
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4345
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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