Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00705
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   1.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 423 EIMRDFSKFLLMLDSNMKLGIHCNYYF 503
           EI   FS  LLM  ++  +GI C+ YF
Sbjct: 233 EIQTIFSVPLLMKIASQFVGIFCSLYF 259


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 423 EIMRDFSKFLLMLDSNMKLGIHCNYYF 503
           EI   FS  LLM  ++  +GI C+ YF
Sbjct: 58  EIQTIFSVPLLMKIASQFVGIFCSLYF 84


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +2

Query: 362 IDSR*VLKKPLEILVFFLVV*NNERFFKISPYVRFEYEIRDT-L*LLF*SRQPTVCRLRD 538
           ++ R +L     ++ F +V+     + K+SP V F     DT L +L  S      R + 
Sbjct: 314 LNRRTILGVSNAVITFLIVMVQKASYEKLSPVVLFIQVAADTVLFILNISTIIITARKKQ 373

Query: 539 QW 544
           QW
Sbjct: 374 QW 375


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 438 FSKFLLMLDSNMKLGIH 488
           + KF      N+KLGIH
Sbjct: 423 YKKFYEQFSKNIKLGIH 439


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,954
Number of Sequences: 336
Number of extensions: 2378
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)