Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00703
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.26 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   0.60 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   2.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   5.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   5.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   7.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.8  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 0.26
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 220 YPYTHSSLSLFCGGGATSQGPSRLGH 143
           +P  H+S++ F G G    G S LGH
Sbjct: 243 FPSIHNSINPFLGQGFAVPGLSPLGH 268


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.60
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 315 SNVRGITPATPMTSNAWRFTLTS 383
           SNV   TP  P TS   R TLT+
Sbjct: 153 SNVISSTPLPPTTSTTTRTTLTT 175


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 107 YILIVPSSSLYWHVWVLSSILYYIIVVFFF 18
           Y+L + +SS+  HV   +S +Y    +FFF
Sbjct: 49  YVLTILTSSVTLHV-CFNSYMYAFTHIFFF 77


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 213 YGYRGKDCRSNLYLC 257
           YGY GKDC   +  C
Sbjct: 89  YGYTGKDCGEYVDWC 103



 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 219 YRGKDCRSNLYLCPPV 266
           + G+DC  +L  C P+
Sbjct: 554 FDGRDCEESLQPCNPI 569


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 98  IVPSSSLYWHVWV 60
           I P  SL WH W+
Sbjct: 467 IQPYDSLLWHTWM 479


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +2

Query: 302 FNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGH 415
           F   ++ QRH   HT + +      NK  + S   A H
Sbjct: 356 FTRSDELQRHLRTHTGEKRFACPICNKRFMRSDHLAKH 393


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 74 WHVWVLSSILYYIIVVFFFCET 9
          WHV   +  LY I VVF F  T
Sbjct: 23 WHVENPTYRLYKIFVVFSFAVT 44


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 419 GRGRRTGXWLRST 381
           G+GR T  WL ST
Sbjct: 72  GKGRTTFRWLSST 84


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 419 GRGRRTGXWLRST 381
           G+GR T  WL ST
Sbjct: 72  GKGRTTFRWLSST 84


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
          protein 17 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 90 VFFIVLACVGAVVH 49
          V F+V ACV A V+
Sbjct: 4  VLFVVFACVQAYVY 17


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 240 SNLYLCPPVRSCTL-LHRSWCYST 308
           S+++    + S TL  HRSWC S+
Sbjct: 216 SSIWSPASIDSFTLEQHRSWCSSS 239


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 174 APPPQNKLKLEWVYGYRGKDCRSNLY 251
           A PP +    +W+YG  G +     Y
Sbjct: 90  ANPPISTEHCDWLYGIFGHETSCTRY 115


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 142 SDQDGLDPAKSRPHRKTSSN 201
           ++QDG +  K +PH K   N
Sbjct: 465 NNQDGNNGEKKKPHIKKPLN 484


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 142 SDQDGLDPAKSRPHRKTSSN 201
           ++QDG +  K +PH K   N
Sbjct: 357 NNQDGNNGEKKKPHIKKPLN 376


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 58  STHTCQYNEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKSRPHRKTSS 198
           S+  C Y+      R ++  +PV    P+D  G   A +    +T+S
Sbjct: 144 SSTWCNYSAYSSASRHHVDHQPVPYLTPADDRGRVAAAAAMVAETAS 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,236
Number of Sequences: 336
Number of extensions: 2805
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)