Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00703
(465 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97018-1|AAB57824.1| 717|Homo sapiens HuEMAP protein. 105 1e-22
BC146799-1|AAI46800.1| 923|Homo sapiens EML4 protein protein. 105 1e-22
BC033043-1|AAH33043.1| 815|Homo sapiens echinoderm microtubule ... 105 1e-22
BC032541-1|AAH32541.1| 815|Homo sapiens echinoderm microtubule ... 105 1e-22
AJ420603-1|CAD12600.2| 815|Homo sapiens echinoderm microtubule ... 105 1e-22
AF177377-1|AAG09279.2| 981|Homo sapiens cytoplasmic protein pro... 105 1e-22
AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2 prot... 105 1e-22
AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1 prot... 105 1e-22
AC006038-1|AAY15086.1| 911|Homo sapiens unknown protein. 103 3e-22
BC032630-1|AAH32630.1| 427|Homo sapiens EML2 protein protein. 100 5e-21
AF103939-1|AAD19904.1| 649|Homo sapiens echinoderm microtubule-... 100 5e-21
AB209773-1|BAD93010.1| 574|Homo sapiens echinoderm microtubule ... 98 2e-20
BC108280-1|AAI08281.1| 896|Homo sapiens echinoderm microtubule ... 65 1e-10
AK128679-1|BAC87566.1| 780|Homo sapiens protein ( Homo sapiens ... 65 1e-10
AK093146-1|BAC04073.1| 889|Homo sapiens protein ( Homo sapiens ... 65 1e-10
AY357725-1|AAQ62653.1| 558|Homo sapiens echinoderm microtubule ... 60 4e-09
BC032685-1|AAH32685.1| 662|Homo sapiens EML5 protein protein. 58 2e-08
AK128086-1|BAC87266.1| 820|Homo sapiens protein ( Homo sapiens ... 44 2e-04
AK127024-1|BAC86793.1| 764|Homo sapiens protein ( Homo sapiens ... 43 6e-04
AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens ... 38 0.013
AK093802-1|BAC04225.1| 675|Homo sapiens protein ( Homo sapiens ... 38 0.013
BC121186-1|AAI21187.1| 729|Homo sapiens WDR90 protein protein. 35 0.12
BC121185-1|AAI21186.1| 730|Homo sapiens WDR90 protein protein. 35 0.12
AL022341-2|CAC79469.1| 754|Homo sapiens protein ( Human DNA seq... 35 0.12
AK091062-1|BAC03575.1| 492|Homo sapiens cotransporter. protein. 35 0.12
AE006464-7|AAK61239.1| 705|Homo sapiens Hypothetical protein pr... 35 0.12
AB067511-1|BAB67817.1| 613|Homo sapiens KIAA1924 protein protein. 35 0.12
BC026067-1|AAH26067.2| 464|Homo sapiens WDSOF1 protein protein. 33 0.37
BC112042-1|AAI12043.1| 597|Homo sapiens WD repeats and SOF1 dom... 33 0.48
BC101810-1|AAI01811.1| 597|Homo sapiens WD repeats and SOF1 dom... 33 0.48
AK074725-1|BAC11163.1| 597|Homo sapiens protein ( Homo sapiens ... 33 0.48
AK027799-1|BAB55377.1| 597|Homo sapiens protein ( Homo sapiens ... 33 0.48
AK001874-1|BAA91955.1| 445|Homo sapiens protein ( Homo sapiens ... 33 0.48
BC036233-1|AAH36233.1| 946|Homo sapiens WDR66 protein protein. 31 1.5
BC028421-1|AAH28421.1| 1154|Homo sapiens WD repeat domain 66 pro... 31 1.5
U13658-1|AAA79867.1| 475|Homo sapiens RO52 protein. 31 2.0
U01882-1|AAB87094.1| 475|Homo sapiens 52 kda component of SS-A/... 31 2.0
M62800-1|AAA36651.1| 475|Homo sapiens 52-kD SS-A/Ro autoantigen... 31 2.0
M34551-1|AAA36581.1| 475|Homo sapiens protein ( Human 52-kD rib... 31 2.0
BC126396-1|AAI26397.1| 574|Homo sapiens forkhead box J2 protein. 31 2.0
BC010861-1|AAH10861.1| 475|Homo sapiens tripartite motif-contai... 31 2.0
AY742713-1|AAU89982.1| 475|Homo sapiens Sjogren syndrome antige... 31 2.0
AK090617-1|BAC03488.1| 414|Homo sapiens protein ( Homo sapiens ... 31 2.0
AF391283-1|AAK76432.1| 475|Homo sapiens SSA1 protein. 31 2.0
AF155133-1|AAK49016.1| 526|Homo sapiens FOXJ2 forkhead factor i... 31 2.0
AF155132-1|AAF65927.1| 574|Homo sapiens FOXJ2 forkhead factor p... 31 2.0
BC117229-1|AAI17230.1| 539|Homo sapiens SLC17A8 protein protein. 31 2.6
BC022969-1|AAH22969.1| 520|Homo sapiens kelch domain containing... 31 2.6
BC011680-1|AAH11680.1| 489|Homo sapiens KLHDC4 protein protein. 31 2.6
AJ459241-1|CAD30553.1| 589|Homo sapiens vesicular glutamate tra... 31 2.6
AK023986-1|BAB14756.1| 520|Homo sapiens protein ( Homo sapiens ... 30 4.5
BC036377-1|AAH36377.1| 415|Homo sapiens WD repeat domain 69 pro... 29 6.0
AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open read... 29 6.0
AK127882-1|BAC87175.1| 369|Homo sapiens protein ( Homo sapiens ... 29 6.0
AK098821-1|BAC05425.1| 415|Homo sapiens protein ( Homo sapiens ... 29 6.0
AK097409-1|BAC05039.1| 415|Homo sapiens protein ( Homo sapiens ... 29 6.0
AF149297-1|AAF34820.1| 704|Homo sapiens NAG-5 protein protein. 29 6.0
AF070572-1|AAC28644.1| 585|Homo sapiens unknown protein. 29 6.0
AC073065-2|AAX93215.1| 415|Homo sapiens unknown protein. 29 6.0
L02547-1|AAA35691.1| 431|Homo sapiens cleavage stimulation fact... 29 7.9
BT007138-1|AAP35802.1| 431|Homo sapiens cleavage stimulation fa... 29 7.9
BC048134-1|AAH48134.2| 852|Homo sapiens amine oxidase (flavin c... 29 7.9
BC040194-1|AAH40194.3| 876|Homo sapiens AOF2 protein protein. 29 7.9
BC025362-1|AAH25362.1| 456|Homo sapiens AOF2 protein protein. 29 7.9
BC016639-1|AAH16639.1| 648|Homo sapiens AOF2 protein protein. 29 7.9
BC007425-1|AAH07425.1| 431|Homo sapiens cleavage stimulation fa... 29 7.9
BC001011-1|AAH01011.1| 431|Homo sapiens cleavage stimulation fa... 29 7.9
AL121914-12|CAI19328.1| 431|Homo sapiens cleavage stimulation f... 29 7.9
AL121914-11|CAC12718.2| 345|Homo sapiens cleavage stimulation f... 29 7.9
AL031428-4|CAI19708.2| 876|Homo sapiens amine oxidase (flavin c... 29 7.9
AL031428-3|CAI19707.2| 852|Homo sapiens amine oxidase (flavin c... 29 7.9
AB011173-1|BAA25527.1| 886|Homo sapiens KIAA0601 protein protein. 29 7.9
>U97018-1|AAB57824.1| 717|Homo sapiens HuEMAP protein.
Length = 717
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVD 427
LPTGE VYF+ASVVVL+NVEEQ QRHY GH DDVKCLAVHP+++ +A+ Q AG D
Sbjct: 143 LPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQ 202
Query: 428 ARPHVRVWNSVS 463
PHVR+W+SV+
Sbjct: 203 LPPHVRIWDSVT 214
Score = 53.2 bits (122), Expect = 4e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P +LKLEWVYGYRG+DCR+NLYL P
Sbjct: 119 PTKRLKLEWVYGYRGRDCRNNLYLLP 144
Score = 33.1 bits (72), Expect = 0.48
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQ 150
++ E+G ++++LRGRPV ++ P DQ
Sbjct: 82 FSAEEGYVKLFLRGRPVTMYMPKDQ 106
>BC146799-1|AAI46800.1| 923|Homo sapiens EML4 protein protein.
Length = 923
Score = 105 bits (251), Expect = 1e-22
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDAR 433
LPTGEIVYF+ASVVVLFN EE+ QRHY GHTD VKCLA+HP+K+ +A+ Q AG D+ D R
Sbjct: 221 LPTGEIVYFIASVVVLFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDK-DGR 279
Query: 434 ---PHVRVWNSVS 463
PHVRVW+SV+
Sbjct: 280 PLQPHVRVWDSVT 292
Score = 52.8 bits (121), Expect = 6e-07
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P KLKLEW YGYRGKDCR+N+YL P
Sbjct: 197 PPEKLKLEWAYGYRGKDCRANVYLLP 222
Score = 32.7 bits (71), Expect = 0.64
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 79 NEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKS 174
N+E ++M++RGRP+ + PSD D D ++
Sbjct: 163 NQEGEYIKMFMRGRPITMFIPSDVDNYDDIRT 194
>BC033043-1|AAH33043.1| 815|Homo sapiens echinoderm microtubule
associated protein like 1 protein.
Length = 815
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVD 427
LPTGE VYF+ASVVVL+NVEEQ QRHY GH DDVKCLAVHP+++ +A+ Q AG D
Sbjct: 241 LPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQ 300
Query: 428 ARPHVRVWNSVS 463
PHVR+W+SV+
Sbjct: 301 LPPHVRIWDSVT 312
Score = 53.2 bits (122), Expect = 4e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P +LKLEWVYGYRG+DCR+NLYL P
Sbjct: 217 PTKRLKLEWVYGYRGRDCRNNLYLLP 242
Score = 34.3 bits (75), Expect = 0.21
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQ 150
++ E+G ++M+LRGRPV ++ P DQ
Sbjct: 180 FSAEEGYVKMFLRGRPVTMYMPKDQ 204
>BC032541-1|AAH32541.1| 815|Homo sapiens echinoderm microtubule
associated protein like 1 protein.
Length = 815
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVD 427
LPTGE VYF+ASVVVL+NVEEQ QRHY GH DDVKCLAVHP+++ +A+ Q AG D
Sbjct: 241 LPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQ 300
Query: 428 ARPHVRVWNSVS 463
PHVR+W+SV+
Sbjct: 301 LPPHVRIWDSVT 312
Score = 53.2 bits (122), Expect = 4e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P +LKLEWVYGYRG+DCR+NLYL P
Sbjct: 217 PTKRLKLEWVYGYRGRDCRNNLYLLP 242
Score = 34.3 bits (75), Expect = 0.21
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQ 150
++ E+G ++M+LRGRPV ++ P DQ
Sbjct: 180 FSAEEGYVKMFLRGRPVTMYMPKDQ 204
>AJ420603-1|CAD12600.2| 815|Homo sapiens echinoderm microtubule
associated protein protein.
Length = 815
Score = 105 bits (251), Expect = 1e-22
Identities = 47/72 (65%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVD 427
LPTGE VYF+ASVVVL+NVEEQ QRHY GH DDVKCLAVHP+++ +A+ Q AG D
Sbjct: 241 LPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIATGQVAGTSKDGKQ 300
Query: 428 ARPHVRVWNSVS 463
PHVR+W+SV+
Sbjct: 301 LPPHVRIWDSVT 312
Score = 53.2 bits (122), Expect = 4e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P +LKLEWVYGYRG+DCR+NLYL P
Sbjct: 217 PTKRLKLEWVYGYRGRDCRNNLYLLP 242
Score = 34.3 bits (75), Expect = 0.21
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQ 150
++ E+G ++M+LRGRPV ++ P DQ
Sbjct: 180 FSAEEGYVKMFLRGRPVTMYMPKDQ 204
>AF177377-1|AAG09279.2| 981|Homo sapiens cytoplasmic protein
protein.
Length = 981
Score = 105 bits (251), Expect = 1e-22
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDAR 433
LPTGEIVYF+ASVVVLFN EE+ QRHY GHTD VKCLA+HP+K+ +A+ Q AG D+ D R
Sbjct: 279 LPTGEIVYFIASVVVLFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDK-DGR 337
Query: 434 ---PHVRVWNSVS 463
PHVRVW+SV+
Sbjct: 338 PLQPHVRVWDSVT 350
Score = 52.8 bits (121), Expect = 6e-07
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P KLKLEW YGYRGKDCR+N+YL P
Sbjct: 255 PPEKLKLEWAYGYRGKDCRANVYLLP 280
Score = 32.7 bits (71), Expect = 0.64
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 79 NEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKS 174
N+E ++M++RGRP+ + PSD D D ++
Sbjct: 221 NQEGEYIKMFMRGRPITMFIPSDVDNYDDIRT 252
>AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2
protein.
Length = 1310
Score = 105 bits (251), Expect = 1e-22
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDAR 433
LPTGEIVYF+ASVVVLFN EE+ QRHY GHTD VKCLA+HP+K+ +A+ Q AG D+ D R
Sbjct: 279 LPTGEIVYFIASVVVLFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDK-DGR 337
Query: 434 ---PHVRVWNSVS 463
PHVRVW+SV+
Sbjct: 338 PLQPHVRVWDSVT 350
Score = 52.8 bits (121), Expect = 6e-07
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P KLKLEW YGYRGKDCR+N+YL P
Sbjct: 255 PPEKLKLEWAYGYRGKDCRANVYLLP 280
Score = 32.7 bits (71), Expect = 0.64
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 79 NEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKS 174
N+E ++M++RGRP+ + PSD D D ++
Sbjct: 221 NQEGEYIKMFMRGRPITMFIPSDVDNYDDIRT 252
>AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1
protein.
Length = 1059
Score = 105 bits (251), Expect = 1e-22
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDAR 433
LPTGEIVYF+ASVVVLFN EE+ QRHY GHTD VKCLA+HP+K+ +A+ Q AG D+ D R
Sbjct: 279 LPTGEIVYFIASVVVLFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDK-DGR 337
Query: 434 ---PHVRVWNSVS 463
PHVRVW+SV+
Sbjct: 338 PLQPHVRVWDSVT 350
Score = 52.8 bits (121), Expect = 6e-07
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P KLKLEW YGYRGKDCR+N+YL P
Sbjct: 255 PPEKLKLEWAYGYRGKDCRANVYLLP 280
Score = 32.7 bits (71), Expect = 0.64
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 79 NEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKS 174
N+E ++M++RGRP+ + PSD D D ++
Sbjct: 221 NQEGEYIKMFMRGRPITMFIPSDVDNYDDIRT 252
>AC006038-1|AAY15086.1| 911|Homo sapiens unknown protein.
Length = 911
Score = 103 bits (247), Expect = 3e-22
Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDAR 433
LPTG+IVYF+ASVVVLFN EE+ QRHY GHTD VKCLA+HP+K+ +A+ Q AG D+ D R
Sbjct: 209 LPTGKIVYFIASVVVLFNYEERTQRHYLGHTDCVKCLAIHPDKIRIATGQIAGVDK-DGR 267
Query: 434 ---PHVRVWNSVS 463
PHVRVW+SV+
Sbjct: 268 PLQPHVRVWDSVT 280
Score = 52.8 bits (121), Expect = 6e-07
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P KLKLEW YGYRGKDCR+N+YL P
Sbjct: 185 PPEKLKLEWAYGYRGKDCRANVYLLP 210
Score = 32.7 bits (71), Expect = 0.64
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 79 NEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKS 174
N+E ++M++RGRP+ + PSD D D ++
Sbjct: 151 NQEGEYIKMFMRGRPITMFIPSDVDNYDDIRT 182
>BC032630-1|AAH32630.1| 427|Homo sapiens EML2 protein protein.
Length = 427
Score = 99.5 bits (237), Expect = 5e-21
Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVD 427
LPTGEIVYFVASV VL++VEEQ QRHY GH DD+KCLA+HP+ + +A+ Q AG +
Sbjct: 75 LPTGEIVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQVAGTTKEGKP 134
Query: 428 ARPHVRVWNSVS 463
PHVR+W+SVS
Sbjct: 135 LPPHVRIWDSVS 146
Score = 52.4 bits (120), Expect = 7e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P +LKLEWVYGYRG+DCR+NLYL P
Sbjct: 51 PSCRLKLEWVYGYRGRDCRANLYLLP 76
Score = 30.3 bits (65), Expect = 3.4
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSD 147
++ EDG+++M+LRGRPV + P +
Sbjct: 14 FSVEDGSVKMFLRGRPVPMMIPDE 37
>AF103939-1|AAD19904.1| 649|Homo sapiens echinoderm
microtubule-associated protein-like EMAP2 protein.
Length = 649
Score = 99.5 bits (237), Expect = 5e-21
Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVD 427
LPTGEIVYFVASV VL++VEEQ QRHY GH DD+KCLA+HP+ + +A+ Q AG +
Sbjct: 75 LPTGEIVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQVAGTTKEGKP 134
Query: 428 ARPHVRVWNSVS 463
PHVR+W+SVS
Sbjct: 135 LPPHVRIWDSVS 146
Score = 52.4 bits (120), Expect = 7e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLYLCP 260
P +LKLEWVYGYRG+DCR+NLYL P
Sbjct: 51 PSCRLKLEWVYGYRGRDCRANLYLLP 76
Score = 30.3 bits (65), Expect = 3.4
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSD 147
++ EDG+++M+LRGRPV + P +
Sbjct: 14 FSVEDGSVKMFLRGRPVPMMIPDE 37
>AB209773-1|BAD93010.1| 574|Homo sapiens echinoderm microtubule
associated protein like 2 variant protein.
Length = 574
Score = 97.9 bits (233), Expect = 2e-20
Identities = 44/71 (61%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +2
Query: 257 PTGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAG--HDRVDA 430
PTGEIVYFVASV VL++VEEQ QRHY GH DD+KCLA+HP+ + +A+ Q AG +
Sbjct: 1 PTGEIVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQVAGTTKEGKPL 60
Query: 431 RPHVRVWNSVS 463
PHVR+W+SVS
Sbjct: 61 PPHVRIWDSVS 71
>BC108280-1|AAI08281.1| 896|Homo sapiens echinoderm microtubule
associated protein like 3 protein.
Length = 896
Score = 64.9 bits (151), Expect = 1e-10
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQC-------QRHYTGHTDDVKCLAVHPNKLIVASXQCAG 412
L +GE+VYF+A VVVL+ QRHY GHTD V+CLAVHP+ + VAS Q AG
Sbjct: 268 LRSGEVVYFIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAG 327
Query: 413 HDR--VDARPHVRVWNS 457
D+ +P V +W+S
Sbjct: 328 VDKDGKPLQPVVHIWDS 344
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 150 RRLGPCEVAPPPQNKLKLEWVYGYRGKDCRSNLYL 254
R L PPP+ L L+WVYGYRG+D RSNL++
Sbjct: 234 RSLEELPSGPPPET-LSLDWVYGYRGRDSRSNLFV 267
Score = 33.5 bits (73), Expect = 0.37
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKSRPHRKTSS 198
YN E +++M+LRGRP+ ++ PS L+ S P +T S
Sbjct: 209 YNLEGISVKMFLRGRPITMYIPSGIRSLEELPSGPPPETLS 249
>AK128679-1|BAC87566.1| 780|Homo sapiens protein ( Homo sapiens
cDNA FLJ46843 fis, clone UTERU3001029, moderately
similar to Echinoderm microtubule-associated protein. ).
Length = 780
Score = 64.9 bits (151), Expect = 1e-10
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQC-------QRHYTGHTDDVKCLAVHPNKLIVASXQCAG 412
L +GE+VYF+A VVVL+ QRHY GHTD V+CLAVHP+ + VAS Q AG
Sbjct: 152 LRSGEVVYFIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAG 211
Query: 413 HDR--VDARPHVRVWNS 457
D+ +P V +W+S
Sbjct: 212 VDKDGKPLQPVVHIWDS 228
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 150 RRLGPCEVAPPPQNKLKLEWVYGYRGKDCRSNLYL 254
R L PPP+ L L+WVYGYRG+D RSNL++
Sbjct: 118 RSLEELPSGPPPET-LSLDWVYGYRGRDSRSNLFV 151
Score = 33.5 bits (73), Expect = 0.37
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKSRPHRKTSS 198
YN E +++M+LRGRP+ ++ PS L+ S P +T S
Sbjct: 93 YNLEGISVKMFLRGRPITMYIPSGIRSLEELPSGPPPETLS 133
>AK093146-1|BAC04073.1| 889|Homo sapiens protein ( Homo sapiens
cDNA FLJ35827 fis, clone TESTI2006453, weakly similar to
Microtubule-associated protein like echinoderm EMAP. ).
Length = 889
Score = 64.9 bits (151), Expect = 1e-10
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Frame = +2
Query: 254 LPTGEIVYFVASVVVLFNVEEQC-------QRHYTGHTDDVKCLAVHPNKLIVASXQCAG 412
L +GE+VYF+A VVVL+ QRHY GHTD V+CLAVHP+ + VAS Q AG
Sbjct: 240 LRSGEVVYFIACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAG 299
Query: 413 HDR--VDARPHVRVWNS 457
D+ +P V +W+S
Sbjct: 300 VDKDGKPLQPVVHIWDS 316
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 150 RRLGPCEVAPPPQNKLKLEWVYGYRGKDCRSNLYL 254
R L PPP+ L L+WVYGYRG+D RSNL++
Sbjct: 206 RSLEELPSGPPPET-LSLDWVYGYRGRDSRSNLFV 239
Score = 33.5 bits (73), Expect = 0.37
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 76 YNEEDGTMRMYLRGRPVVLHGPSDQDGLDPAKSRPHRKTSS 198
YN E +++M+LRGRP+ ++ PS L+ S P +T S
Sbjct: 181 YNLEGISVKMFLRGRPITMYIPSGIRSLEELPSGPPPETLS 221
>AY357725-1|AAQ62653.1| 558|Homo sapiens echinoderm microtubule
associated protein-like 5 protein.
Length = 558
Score = 60.1 bits (139), Expect = 4e-09
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +2
Query: 263 GEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDARPHV 442
GEIVY VA+V V++N ++ QR Y GH DD+ CL +HP K VA+ Q G D P +
Sbjct: 199 GEIVYHVAAVGVIYNRQQNTQRFYLGHDDDILCLTIHPLKDYVATGQ-VGRD-----PSI 252
Query: 443 RVWNS 457
+W++
Sbjct: 253 HIWDT 257
Score = 42.3 bits (95), Expect = 8e-04
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 84 RRRYNEDVPPRKASCPTRAQ*PRRLGPCEVAPPPQNKLKLEWVYGYRGKDCRSNLY 251
R+ Y ED+P K C + + P N ++L +V+GYRG DCRSNL+
Sbjct: 142 RQVYKEDLPQLKEQCKEKQ---KSATSKRRERAPGNSIRLHFVHGYRGYDCRSNLF 194
>BC032685-1|AAH32685.1| 662|Homo sapiens EML5 protein protein.
Length = 662
Score = 57.6 bits (133), Expect = 2e-08
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +2
Query: 266 EIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDARPHVR 445
EIVYFVA V V+++ E Q+ Y GH+DD+ LA+HP +++VA+ Q V P++
Sbjct: 35 EIVYFVAGVGVVYSPREHRQKFYRGHSDDIISLALHPERVLVATGQ------VGKEPYIC 88
Query: 446 VWNS 457
+W+S
Sbjct: 89 IWDS 92
Score = 42.3 bits (95), Expect = 8e-04
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLY 251
P L+LEWVYGYRG CR+NLY
Sbjct: 7 PSCHLRLEWVYGYRGHQCRNNLY 29
>AK128086-1|BAC87266.1| 820|Homo sapiens protein ( Homo sapiens
cDNA FLJ46207 fis, clone TESTI4010902, weakly similar
to Echinoderm microtubule-associated protein. ).
Length = 820
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +2
Query: 266 EIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAV--HPNKL-IVASXQCA-GHDRVDAR 433
+I+Y ASV +L NV Q Y H DD+ CL V HP + IVA+ Q D
Sbjct: 527 DIIYHTASVGILHNVATGSQSFYQEHNDDILCLTVNQHPKFINIVATGQVGDSADMSATA 586
Query: 434 PHVRVWNSVS 463
P + +W++++
Sbjct: 587 PSIHIWDAMN 596
Score = 33.9 bits (74), Expect = 0.28
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLY 251
P L LE ++GYRG+DCR+N++
Sbjct: 498 PIEDLVLELIFGYRGRDCRNNVH 520
>AK127024-1|BAC86793.1| 764|Homo sapiens protein ( Homo sapiens
cDNA FLJ45080 fis, clone BRAWH3027806, weakly similar
to Echinoderm microtubule-associated protein-like 2. ).
Length = 764
Score = 42.7 bits (96), Expect = 6e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 266 EIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAV--HPNKL-IVASXQCA-GHDRVDAR 433
+I+Y ASV +L N Q Y H DD+ CL V HP + IVA+ Q D
Sbjct: 183 DIIYHTASVGILHNAATGSQSFYQEHNDDILCLTVNQHPKFINIVATGQVGDSADMSATA 242
Query: 434 PHVRVWNSVS 463
P + +W++++
Sbjct: 243 PSIHIWDAMN 252
Score = 33.9 bits (74), Expect = 0.28
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 183 PQNKLKLEWVYGYRGKDCRSNLY 251
P L LE ++GYRG+DCR+N++
Sbjct: 154 PIEDLVLELIFGYRGRDCRNNVH 176
>AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens
cDNA FLJ44660 fis, clone BRACE3002344, weakly similar
to Vegetatible incompatibility protein HET-E-1. ).
Length = 1060
Score = 38.3 bits (85), Expect = 0.013
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 260 TGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDARPH 439
TG Y +VV+ ++ Q+H++GH+ ++ LA+ + ++AS +G A
Sbjct: 657 TGFFAYTCGRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLAS--ASGRSSTTAHCQ 714
Query: 440 VRVWN 454
+RVW+
Sbjct: 715 IRVWD 719
>AK093802-1|BAC04225.1| 675|Homo sapiens protein ( Homo sapiens
cDNA FLJ36483 fis, clone THYMU2017601. ).
Length = 675
Score = 38.3 bits (85), Expect = 0.013
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 260 TGEIVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDARPH 439
TG Y +VV+ ++ Q+H++GH+ ++ LA+ + ++AS +G A
Sbjct: 270 TGFFAYTCGRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLAS--ASGRSSTTAHCQ 327
Query: 440 VRVWN 454
+RVW+
Sbjct: 328 IRVWD 332
>BC121186-1|AAI21187.1| 729|Homo sapiens WDR90 protein protein.
Length = 729
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 QPISLPTGE-IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQ 403
Q + P G +VY +V+V+ V+ QR + GHTD V LA+ + ++AS Q
Sbjct: 374 QALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGSSSLLASAQ 428
>BC121185-1|AAI21186.1| 730|Homo sapiens WDR90 protein protein.
Length = 730
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 QPISLPTGE-IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQ 403
Q + P G +VY +V+V+ V+ QR + GHTD V LA+ + ++AS Q
Sbjct: 375 QALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGSSSLLASAQ 429
>AL022341-2|CAC79469.1| 754|Homo sapiens protein ( Human DNA
sequence from clone LA16c-349E10 on chromosome 16
Contains(part of) three novel genes, ESTs, STSs, GSSs
and four CpG islands. leukoencnovel protein).
Length = 754
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 QPISLPTGE-IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQ 403
Q + P G +VY +V+V+ V+ QR + GHTD V LA+ + ++AS Q
Sbjct: 374 QALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGSSSLLASAQ 428
>AK091062-1|BAC03575.1| 492|Homo sapiens cotransporter. protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 QPISLPTGE-IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQ 403
Q + P G +VY +V+V+ V+ QR + GHTD V LA+ + ++AS Q
Sbjct: 374 QALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGSSSLLASAQ 428
>AE006464-7|AAK61239.1| 705|Homo sapiens Hypothetical protein
protein.
Length = 705
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 QPISLPTGE-IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQ 403
Q + P G +VY +V+V+ V+ QR + GHTD V LA+ + ++AS Q
Sbjct: 415 QALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGSSSLLASAQ 469
>AB067511-1|BAB67817.1| 613|Homo sapiens KIAA1924 protein protein.
Length = 613
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 QPISLPTGE-IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVASXQ 403
Q + P G +VY +V+V+ V+ QR + GHTD V LA+ + ++AS Q
Sbjct: 495 QALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGSSSLLASAQ 549
>BC026067-1|AAH26067.2| 464|Homo sapiens WDSOF1 protein protein.
Length = 464
Score = 33.5 bits (73), Expect = 0.37
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 338 GHTDDVKCLAVHPNKL-IVASXQCAGHDRV 424
GH D V CLA HP KL V S C G R+
Sbjct: 83 GHRDGVNCLAKHPEKLATVLSGSCDGEVRI 112
>BC112042-1|AAI12043.1| 597|Homo sapiens WD repeats and SOF1 domain
containing protein.
Length = 597
Score = 33.1 bits (72), Expect = 0.48
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 338 GHTDDVKCLAVHPNKL-IVASXQCAGHDRV 424
GH D V CLA HP KL V S C G R+
Sbjct: 216 GHRDGVNCLAKHPEKLATVLSGACDGEVRI 245
>BC101810-1|AAI01811.1| 597|Homo sapiens WD repeats and SOF1 domain
containing protein.
Length = 597
Score = 33.1 bits (72), Expect = 0.48
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 338 GHTDDVKCLAVHPNKL-IVASXQCAGHDRV 424
GH D V CLA HP KL V S C G R+
Sbjct: 216 GHRDGVNCLAKHPEKLATVLSGACDGEVRI 245
>AK074725-1|BAC11163.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90244 fis, clone NT2RM2001738, weakly similar to
SOF1 PROTEIN. ).
Length = 597
Score = 33.1 bits (72), Expect = 0.48
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 338 GHTDDVKCLAVHPNKL-IVASXQCAGHDRV 424
GH D V CLA HP KL V S C G R+
Sbjct: 216 GHRDGVNCLAKHPEKLATVLSGACDGEVRI 245
>AK027799-1|BAB55377.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ14893 fis, clone PLACE1004302, weakly similar to
SOF1 PROTEIN. ).
Length = 597
Score = 33.1 bits (72), Expect = 0.48
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 338 GHTDDVKCLAVHPNKL-IVASXQCAGHDRV 424
GH D V CLA HP KL V S C G R+
Sbjct: 216 GHRDGVNCLAKHPEKLATVLSGACDGEVRI 245
>AK001874-1|BAA91955.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ11012 fis, clone PLACE1003190, weakly similar to
SOF1 PROTEIN. ).
Length = 445
Score = 33.1 bits (72), Expect = 0.48
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 338 GHTDDVKCLAVHPNKL-IVASXQCAGHDRV 424
GH D V CLA HP KL V S C G R+
Sbjct: 64 GHRDGVNCLAKHPEKLATVLSGACDGEVRI 93
>BC036233-1|AAH36233.1| 946|Homo sapiens WDR66 protein protein.
Length = 946
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 269 IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVAS 397
++Y A +++NV Q H GH + + CL V ++ +A+
Sbjct: 279 LLYVCAHTAIIYNVFRNNQYHLQGHANIISCLCVSEDRRWIAT 321
>BC028421-1|AAH28421.1| 1154|Homo sapiens WD repeat domain 66
protein.
Length = 1154
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 269 IVYFVASVVVLFNVEEQCQRHYTGHTDDVKCLAVHPNKLIVAS 397
++Y A +++NV Q H GH + + CL V ++ +A+
Sbjct: 279 LLYVCAHTAIIYNVFRNNQYHLQGHANIISCLCVSEDRRWIAT 321
>U13658-1|AAA79867.1| 475|Homo sapiens RO52 protein.
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>U01882-1|AAB87094.1| 475|Homo sapiens 52 kda component of SS-A/Ro
autoantigen protein.
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>M62800-1|AAA36651.1| 475|Homo sapiens 52-kD SS-A/Ro autoantigen
protein.
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>M34551-1|AAA36581.1| 475|Homo sapiens protein ( Human 52-kD
ribonucleoprotein Ro/SSA mRNA, complete cds. ).
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>BC126396-1|AAI26397.1| 574|Homo sapiens forkhead box J2 protein.
Length = 574
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 27 NHYYIIQNGRQHPHMPVQ*RRRYNEDVPPRKASCPTRAQ*PRRLGPCEV-APPPQNKLKL 203
N+YY+ Q +Q P P Q +++ PP + S P + Q P + GP V PP +
Sbjct: 285 NNYYMYQ--QQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQ-GPSAVGGAPPLHTPST 341
Query: 204 EWVYGYRGKDCRSNLYLCPPV 266
+ GK + Y PPV
Sbjct: 342 DGCTPPGGKQAGAEGYGPPPV 362
>BC010861-1|AAH10861.1| 475|Homo sapiens tripartite
motif-containing 21 protein.
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>AY742713-1|AAU89982.1| 475|Homo sapiens Sjogren syndrome antigen
A1 protein.
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>AK090617-1|BAC03488.1| 414|Homo sapiens protein ( Homo sapiens
cDNA FLJ33298 fis, clone BNGH42001576, moderately
similar to Mus musculus mRNA for JNK-binding protein
JNKBP1. ).
Length = 414
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 TGEIVYFVASVVVLFNVEEQCQRH-YTGHTDDVKCLAVHPNKLIVASXQCAGHDRVDARP 436
TG + Y VVV+ + +E Q+H + + LA P+ + + + GH RP
Sbjct: 82 TGHVAYLAGCVVVILDPKENKQQHIFNTARKSLSALAFSPDGKYIVTGE-NGH-----RP 135
Query: 437 HVRVWN 454
VR+W+
Sbjct: 136 AVRIWD 141
>AF391283-1|AAK76432.1| 475|Homo sapiens SSA1 protein.
Length = 475
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 182 WGRDFAGSKPSWSLGPCRTTGLPRRYILIVPSSSLYWHVWVLSSILY 42
W D G K +W LG CR + + R+ ++ S S +W +W+ + Y
Sbjct: 344 WEVDVTG-KEAWDLGVCRDS-VRRKGHFLLSSKSGFWTIWLWNKQKY 388
>AF155133-1|AAK49016.1| 526|Homo sapiens FOXJ2 forkhead factor
isoform FOXJ2.S protein.
Length = 526
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 27 NHYYIIQNGRQHPHMPVQ*RRRYNEDVPPRKASCPTRAQ*PRRLGPCEV-APPPQNKLKL 203
N+YY+ Q +Q P P Q +++ PP + S P + Q P + GP V PP +
Sbjct: 285 NNYYMYQ--QQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQ-GPSAVGGAPPLHTPST 341
Query: 204 EWVYGYRGKDCRSNLYLCPPV 266
+ GK + Y PPV
Sbjct: 342 DGCTPPGGKQAGAEGYGPPPV 362
>AF155132-1|AAF65927.1| 574|Homo sapiens FOXJ2 forkhead factor
protein.
Length = 574
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 27 NHYYIIQNGRQHPHMPVQ*RRRYNEDVPPRKASCPTRAQ*PRRLGPCEV-APPPQNKLKL 203
N+YY+ Q +Q P P Q +++ PP + S P + Q P + GP V PP +
Sbjct: 285 NNYYMYQ--QQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQ-GPSAVGGAPPLHTPST 341
Query: 204 EWVYGYRGKDCRSNLYLCPPV 266
+ GK + Y PPV
Sbjct: 342 DGCTPPGGKQAGAEGYGPPPV 362
>BC117229-1|AAI17230.1| 539|Homo sapiens SLC17A8 protein protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 179 GRDFAGSKPSWSLGPCRTTGLPRRYILIVPS 87
GR S+PS L C GLP+RYI+ + S
Sbjct: 52 GRPVQTSRPSPPLCDCHCCGLPKRYIIAIMS 82
>BC022969-1|AAH22969.1| 520|Homo sapiens kelch domain containing 4
protein.
Length = 520
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 242 APAVFASISVHPFKFELVLRWGRDFAGSK 156
+P + AS+SVHP K EL+L G F G K
Sbjct: 62 SPRLNASLSVHPEKDELILFGGEYFNGQK 90
>BC011680-1|AAH11680.1| 489|Homo sapiens KLHDC4 protein protein.
Length = 489
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 242 APAVFASISVHPFKFELVLRWGRDFAGSK 156
+P + AS+SVHP K EL+L G F G K
Sbjct: 62 SPRLNASLSVHPEKDELILFGGEYFNGQK 90
>AJ459241-1|CAD30553.1| 589|Homo sapiens vesicular glutamate
transporter 3 protein.
Length = 589
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 179 GRDFAGSKPSWSLGPCRTTGLPRRYILIVPS 87
GR S+PS L C GLP+RYI+ + S
Sbjct: 52 GRPVQTSRPSPPLCDCHCCGLPKRYIIAIMS 82
>AK023986-1|BAB14756.1| 520|Homo sapiens protein ( Homo sapiens
cDNA FLJ13924 fis, clone Y79AA1000540, weakly similar to
CELL POLARITY PROTEIN TEA1. ).
Length = 520
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 242 APAVFASISVHPFKFELVLRWGRDFAGSK 156
+P + AS+SVHP K EL+L G F G K
Sbjct: 62 SPRLNASLSVHPEKDELILFGGGYFNGQK 90
>BC036377-1|AAH36377.1| 415|Homo sapiens WD repeat domain 69
protein.
Length = 415
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 LFNVEE-QCQRHYTGHTDDVKCLAVHPNKLIVAS 397
L++VE +C + GHT ++ CL+ +P +VA+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
>AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open reading
frame 127 protein.
Length = 702
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = -3
Query: 244 LLLQSLPLYPYTHSSLSLFCGGGATSQGPSRL---GHWARVGQLAFRGGTSSLYRLLHCT 74
L L+ P P H+S S+ CGG + Q L GHW V G R C
Sbjct: 286 LSLRLRPKAPPLHNSSSVACGGASGCQLELALPPWGHWVYVRVETSSRGPGRTIRFQLCV 345
Query: 73 GMCGCCRP 50
+ C +P
Sbjct: 346 RLQECPQP 353
>AK127882-1|BAC87175.1| 369|Homo sapiens protein ( Homo sapiens
cDNA FLJ45988 fis, clone PUAEN2006639, weakly similar
to Vegetatible incompatibility protein HET-E-1. ).
Length = 369
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 LFNVEE-QCQRHYTGHTDDVKCLAVHPNKLIVAS 397
L++VE +C + GHT ++ CL+ +P +VA+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
>AK098821-1|BAC05425.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ25955 fis, clone TST03904. ).
Length = 415
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 LFNVEE-QCQRHYTGHTDDVKCLAVHPNKLIVAS 397
L++VE +C + GHT ++ CL+ +P +VA+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
>AK097409-1|BAC05039.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ40090 fis, clone TESTI2003596, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 415
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 LFNVEE-QCQRHYTGHTDDVKCLAVHPNKLIVAS 397
L++VE +C + GHT ++ CL+ +P +VA+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
>AF149297-1|AAF34820.1| 704|Homo sapiens NAG-5 protein protein.
Length = 704
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = -3
Query: 244 LLLQSLPLYPYTHSSLSLFCGGGATSQGPSRL---GHWARVGQLAFRGGTSSLYRLLHCT 74
L L+ P P H+S S+ CGG + Q L GHW V G R C
Sbjct: 288 LSLRLRPKAPPLHNSSSVACGGASGCQLELALPPWGHWVYVRVETSSRGPGRTIRFQLCV 347
Query: 73 GMCGCCRP 50
+ C +P
Sbjct: 348 QLQECPQP 355
>AF070572-1|AAC28644.1| 585|Homo sapiens unknown protein.
Length = 585
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = -3
Query: 244 LLLQSLPLYPYTHSSLSLFCGGGATSQGPSRL---GHWARVGQLAFRGGTSSLYRLLHCT 74
L L+ P P H+S S+ CGG + Q L GHW V G R C
Sbjct: 169 LSLRLRPKAPPLHNSSSVACGGASGCQLELALPPWGHWVYVRVETSSRGPGRTIRFQLCV 228
Query: 73 GMCGCCRP 50
+ C +P
Sbjct: 229 QLQECPQP 236
>AC073065-2|AAX93215.1| 415|Homo sapiens unknown protein.
Length = 415
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 299 LFNVEE-QCQRHYTGHTDDVKCLAVHPNKLIVAS 397
L++VE +C + GHT ++ CL+ +P +VA+
Sbjct: 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
>L02547-1|AAA35691.1| 431|Homo sapiens cleavage stimulation factor
protein.
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 341 HTDDVKCLAVHPNKLIVAS 397
H D+V CLA HP + I+AS
Sbjct: 172 HVDEVTCLAFHPTEQILAS 190
>BT007138-1|AAP35802.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 341 HTDDVKCLAVHPNKLIVAS 397
H D+V CLA HP + I+AS
Sbjct: 172 HVDEVTCLAFHPTEQILAS 190
>BC048134-1|AAH48134.2| 852|Homo sapiens amine oxidase (flavin
containing) domain 2 protein.
Length = 852
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 580 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 632
>BC040194-1|AAH40194.3| 876|Homo sapiens AOF2 protein protein.
Length = 876
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 604 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 656
>BC025362-1|AAH25362.1| 456|Homo sapiens AOF2 protein protein.
Length = 456
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 184 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 236
>BC016639-1|AAH16639.1| 648|Homo sapiens AOF2 protein protein.
Length = 648
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 376 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 428
>BC007425-1|AAH07425.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 341 HTDDVKCLAVHPNKLIVAS 397
H D+V CLA HP + I+AS
Sbjct: 172 HVDEVTCLAFHPTEQILAS 190
>BC001011-1|AAH01011.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 341 HTDDVKCLAVHPNKLIVAS 397
H D+V CLA HP + I+AS
Sbjct: 172 HVDEVTCLAFHPTEQILAS 190
>AL121914-12|CAI19328.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 341 HTDDVKCLAVHPNKLIVAS 397
H D+V CLA HP + I+AS
Sbjct: 172 HVDEVTCLAFHPTEQILAS 190
>AL121914-11|CAC12718.2| 345|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 345
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 341 HTDDVKCLAVHPNKLIVAS 397
H D+V CLA HP + I+AS
Sbjct: 172 HVDEVTCLAFHPTEQILAS 190
>AL031428-4|CAI19708.2| 876|Homo sapiens amine oxidase (flavin
containing) domain 2 protein.
Length = 876
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 604 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 656
>AL031428-3|CAI19707.2| 852|Homo sapiens amine oxidase (flavin
containing) domain 2 protein.
Length = 852
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 580 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 632
>AB011173-1|BAA25527.1| 886|Homo sapiens KIAA0601 protein protein.
Length = 886
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 151 DGLDPAKSRPHRKTSSNLNGCTDIEAKTAGATYIFAHR*DRVLCCIGRGAIQR 309
+GLD + R+ +GC I T + F ++ D VLC + G +++
Sbjct: 614 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 666
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,050,177
Number of Sequences: 237096
Number of extensions: 2005554
Number of successful extensions: 9305
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 8748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9288
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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