Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00703
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   0.53 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   0.53 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   0.53 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   0.93 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.5  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   8.6  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   8.6  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 196 SLFCGGGATSQGPSRLGHW 140
           +L+CG G  S GP+ LG +
Sbjct: 34  TLWCGHGNKSSGPNELGRF 52


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 196 SLFCGGGATSQGPSRLGHW 140
           +L+CG G  S GP+ LG +
Sbjct: 39  TLWCGHGNKSSGPNELGRF 57


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 196 SLFCGGGATSQGPSRLGHW 140
           +L+CG G  S GP+ LG +
Sbjct: 39  TLWCGHGNKSSGPNELGRF 57


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +3

Query: 30  HYYIIQNGRQHPHMPVQ*RRRYNEDVPPRKASCPTR 137
           H Y         H PV   R+ N DV P   S P +
Sbjct: 246 HCYFDIEPTVQQHQPVTVNRQLNSDVQPGHGSPPVK 281


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -3

Query: 82  HCTGMCGCC 56
           HC  +C CC
Sbjct: 742 HCFALCHCC 750


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 106 YLRGRPVVLHGPSDQDGL 159
           YL+ R + LH   D DG+
Sbjct: 98  YLKERHITLHHCYDADGI 115


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 106 YLRGRPVVLHGPSDQDGL 159
           YL+ R + LH   D DG+
Sbjct: 98  YLKERHITLHHCYDADGI 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,612
Number of Sequences: 438
Number of extensions: 3821
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)