Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00701
(411 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 130 1e-31
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 91 8e-20
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 90 1e-19
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 87 8e-19
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 86 2e-18
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 84 7e-18
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 64 6e-12
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 62 2e-11
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 37 0.001
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 1.5
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 1.5
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 2.6
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 6.1
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 130 bits (313), Expect = 1e-31
Identities = 64/95 (67%), Positives = 72/95 (75%)
Frame = +1
Query: 1 AGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV 180
+G + G+ VR QNV+ N+VKSSLGPVGLDKMLVDDIGDVTVTNDGATIL +L+V
Sbjct: 13 SGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDV 72
Query: 181 EHPAAKVLVELAQLQDEEVGDGTTXXXXXXXNYLR 285
EHPA KVLVELAQ QD+EVGDGTT LR
Sbjct: 73 EHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLR 107
Score = 59.7 bits (138), Expect = 2e-10
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPDNLT 389
VVIIAAELL+ A+ELVK KIHPT+II+G R A EAVK++ D L+
Sbjct: 98 VVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLS 142
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 90.6 bits (215), Expect = 8e-20
Identities = 42/77 (54%), Positives = 60/77 (77%)
Frame = +1
Query: 22 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 201
D V++ +++ NIV++SLGP GLDK+L+ G++TVTNDGATIL +EVEH AK+
Sbjct: 34 DAVKS-HILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKL 92
Query: 202 LVELAQLQDEEVGDGTT 252
LV+L++ QD+E+GDGTT
Sbjct: 93 LVQLSKSQDDEIGDGTT 109
Score = 36.7 bits (81), Expect = 0.001
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYI 374
VV++A LL+ A+ L+ IHP I G AC AVK++
Sbjct: 111 VVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHL 150
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 90.2 bits (214), Expect = 1e-19
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +1
Query: 40 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 219
N+ + ++++LGP+G DK++VDD G+V ++NDGATI+K+L++ HPAAK LV++A+
Sbjct: 29 NINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIAR 88
Query: 220 LQDEEVGDGTTXXXXXXXNYLR 285
QD EVGDGTT LR
Sbjct: 89 AQDAEVGDGTTSVVVFAGELLR 110
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 87.4 bits (207), Expect = 8e-19
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = +1
Query: 4 GTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVE 183
G R G + N+ +++++ LGP + KML+D +G V +TNDG IL+ +EV
Sbjct: 12 GNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVA 71
Query: 184 HPAAKVLVELAQLQDEEVGDGTT 252
HPAAK ++ELA+ QDEEVGDGTT
Sbjct: 72 HPAAKSMIELARTQDEEVGDGTT 94
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 86.2 bits (204), Expect = 2e-18
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +1
Query: 28 VRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLV 207
VR N+M + +++SLGP G+DKM+ G+V +TNDGATILK L V HPAAK+LV
Sbjct: 20 VRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLV 79
Query: 208 ELAQLQDEEVGDGTT 252
+L+ QD E GDGTT
Sbjct: 80 DLSAAQDVEAGDGTT 94
Score = 29.9 bits (64), Expect = 0.16
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPDN 383
VVI+A +L A++L+K IHPT I + A V + +N
Sbjct: 96 VVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKEN 138
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 84.2 bits (199), Expect = 7e-18
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 AGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI-GDVTVTNDGATILKMLE 177
+G + G+ R + + ++VKS+LGP G+DK+L + GD+ VTNDGATILK +
Sbjct: 12 SGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIA 71
Query: 178 VEHPAAKVLVELAQLQDEEVGDGTTXXXXXXXNYLR 285
+++ AAKVLV ++++QD+EVGDGTT LR
Sbjct: 72 LDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLR 107
Score = 36.7 bits (81), Expect = 0.001
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAV 365
V + AAELL+ A+ +V KIHP II G R A A+
Sbjct: 98 VCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAI 134
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 64.5 bits (150), Expect = 6e-12
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +1
Query: 40 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 219
N+ +++KS+LGP G KMLVD G + +T DG +L +++++P A + + A
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAAT 80
Query: 220 LQDEEVGDGTT 252
QD+ GDGTT
Sbjct: 81 AQDDATGDGTT 91
Score = 29.1 bits (62), Expect = 0.28
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYI 374
V ++ ELLK A+ ++ +HP+ I G A EA+ ++
Sbjct: 93 VCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFL 132
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 62.5 bits (145), Expect = 2e-11
Identities = 28/58 (48%), Positives = 43/58 (74%)
Frame = +1
Query: 70 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGD 243
I ++SLGP G +K++V+ + +TND ATI++ LEV HPAAK++V+ Q Q+ E+GD
Sbjct: 41 ITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGD 98
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 37.1 bits (82), Expect = 0.001
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 73 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 240
V +LGP G + ++ G +T DG T+ + + + E+ A+++ ++A +E G
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 241 DGTT 252
DGTT
Sbjct: 118 DGTT 121
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.6 bits (56), Expect = 1.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 80 APLGQLVWIRCWLTILGM 133
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.6 bits (56), Expect = 1.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +2
Query: 80 APLGQLVWIRCWLTILGM 133
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 2.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 83 PLGQLVWIRCWLTILGM 133
PLG+++WI W +LG+
Sbjct: 145 PLGKMMWIFAWRWLLGL 161
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 133 VTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGD 243
+TV N A + + KVL +L +DEE+ D
Sbjct: 979 ITVDNLDAQVQSCADSTELLIKVLSDLGSTEDEEISD 1015
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,496,093
Number of Sequences: 5004
Number of extensions: 24379
Number of successful extensions: 76
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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