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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00701
         (411 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125...    95   3e-20
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995...    87   7e-18
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648...    83   1e-16
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832...    83   1e-16
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118...    82   1e-16
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516...    81   3e-16
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880...    81   4e-16
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949     73   7e-14
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806...    71   4e-13
10_08_0620 - 19321612-19323237                                         64   4e-11
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265...    64   5e-11
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941...    42   1e-04
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16...    42   1e-04
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81...    41   3e-04
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695...    41   3e-04
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238...    40   8e-04
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297...    36   0.010
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349...    33   0.12 
01_06_1809 - 40029628-40030539                                         27   5.8  
07_03_1649 - 28385289-28385358,28387039-28387877                       27   7.7  
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522...    27   7.7  
02_04_0387 - 22548778-22548917,22550635-22550716                       27   7.7  

>04_04_0729 +
           27612106-27612195,27612284-27612370,27612469-27612528,
           27612554-27612688,27612769-27612864,27613149-27613214,
           27613647-27613864,27614093-27614189,27614605-27614691,
           27614892-27615026,27615121-27615225,27615717-27615845,
           27615925-27616028,27616598-27616688,27616774-27616857
          Length = 527

 Score = 94.7 bits (225), Expect = 3e-20
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = +1

Query: 109 MLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 252
           MLVDDIGDVT+TNDGATIL+MLEVEHPAAKVLVELA+LQD EVGDGTT
Sbjct: 1   MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTT 48



 Score = 48.4 bits (110), Expect = 2e-06
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXR 344
           VVIIAAELLK  ++LV+ KIHPTSIISG R
Sbjct: 50  VVIIAAELLKRGNDLVRNKIHPTSIISGYR 79


>06_03_1193 -
           28298656-28298754,28299303-28299377,28299456-28299544,
           28299679-28299760,28300385-28300474,28300557-28300655,
           28300733-28300852,28300968-28301084,28301174-28301309,
           28301415-28301584,28301744-28301947,28302032-28302157,
           28302841-28303101,28303215-28303229
          Length = 560

 Score = 86.6 bits (205), Expect = 7e-18
 Identities = 37/82 (45%), Positives = 58/82 (70%)
 Frame = +1

Query: 40  NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 219
           N+       + V+++LGP G+DK++ DD G  T++NDGATI+++L++ HPAAK+LV++A+
Sbjct: 28  NINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAKILVDIAK 87

Query: 220 LQDEEVGDGTTXXXXXXXNYLR 285
            QD EVGDGTT        +L+
Sbjct: 88  SQDSEVGDGTTTVVLLAAEFLK 109



 Score = 33.5 bits (73), Expect = 0.067
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPDNLT 389
           VV++AAE LK A   ++  +HP S+I   R A   A++ + D  T
Sbjct: 100 VVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLAT 144


>05_07_0067 +
           27463703-27463705,27464309-27464365,27464779-27464844,
           27464985-27465096,27465281-27465409,27466076-27466191,
           27466364-27466440,27466678-27467163,27467255-27467570,
           27467618-27467797
          Length = 513

 Score = 82.6 bits (195), Expect = 1e-16
 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = +1

Query: 7   TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILKMLE 177
           T   G+  R  + +      ++VK++LGP G+DK+L    G    VTVTNDGATILK L 
Sbjct: 11  TEEKGERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLH 69

Query: 178 VEHPAAKVLVELAQLQDEEVGDGTTXXXXXXXNYLR 285
           +++PAAKVLV+++++QD+EVGDGTT         LR
Sbjct: 70  IDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLR 105



 Score = 35.9 bits (79), Expect = 0.013
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +3

Query: 255 VVIIAAELLKNADELVKTKIHPTSIIS 335
           VV++A ELL+ A++LV  KIHP +II+
Sbjct: 96  VVVLAGELLREAEKLVNMKIHPMTIIA 122


>02_02_0253 -
           8325437-8325628,8325705-8325779,8325933-8326037,
           8326249-8326374,8326451-8326835,8326931-8327208,
           8327294-8327367,8327476-8327547,8327637-8327705,
           8340132-8340201,8340806-8340873,8341571-8341643,
           8341807-8341868,8342168-8342198
          Length = 559

 Score = 82.6 bits (195), Expect = 1e-16
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +1

Query: 10  RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 189
           R  G  V   N+       +I++++LGP  + KML+D  G + VTNDG  IL+ L++ HP
Sbjct: 16  RESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHP 75

Query: 190 AAKVLVELAQLQDEEVGDGTT 252
           AAK ++EL++ QDEEVGDGTT
Sbjct: 76  AAKSMIELSRTQDEEVGDGTT 96


>06_03_0353 +
           19810945-19810975,19811308-19811369,19811741-19811813,
           19813292-19813359,19813496-19813565,19813908-19813976,
           19814065-19814136,19814247-19814320,19814420-19814697,
           19814804-19815188,19815268-19815393,19815583-19815687,
           19815986-19815994,19817040-19817114,19817202-19817390
          Length = 561

 Score = 82.2 bits (194), Expect = 1e-16
 Identities = 37/81 (45%), Positives = 54/81 (66%)
 Frame = +1

Query: 10  RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 189
           R  G  V   N+       +I++++LGP  + KML+D  G + VTNDG  IL+ +++ HP
Sbjct: 16  RESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHP 75

Query: 190 AAKVLVELAQLQDEEVGDGTT 252
           AAK ++EL++ QDEEVGDGTT
Sbjct: 76  AAKSMIELSRTQDEEVGDGTT 96


>06_03_0477 -
           21250811-21250981,21251261-21251374,21251447-21251613,
           21252051-21252153,21252315-21252367,21252438-21252570,
           21252835-21253183,21253685-21254003,21254519-21254717
          Length = 535

 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 39/82 (47%), Positives = 56/82 (68%)
 Frame = +1

Query: 7   TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEH 186
           +R  G   +  N+        I+++SLGP G+DKML    GDVT+TNDGATIL+ ++V++
Sbjct: 22  SRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDN 81

Query: 187 PAAKVLVELAQLQDEEVGDGTT 252
             AK++VEL+  QD E+GDGTT
Sbjct: 82  QIAKLMVELSCSQDYEIGDGTT 103


>03_05_0339 +
           23287620-23287676,23287784-23287849,23287937-23288048,
           23288240-23288368,23288795-23288866,23289245-23289360,
           23289494-23289570,23289788-23290273,23290373-23290688,
           23290769-23290915
          Length = 525

 Score = 80.6 bits (190), Expect = 4e-16
 Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
 Frame = +1

Query: 19  GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILKMLEVEHP 189
           G+  R    +      ++VK++LGP G+DK+L    G    VTVTNDGATILK L +++P
Sbjct: 14  GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHIDNP 72

Query: 190 AAKVLVELAQLQDEEVGDGTTXXXXXXXNYLR 285
           AAKVLV+++++QD+EVGDGTT         LR
Sbjct: 73  AAKVLVDISKVQDDEVGDGTTSVVVLAGELLR 104



 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = +3

Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXA 350
           VV++A ELL+ A++LV  KIHP +II+G R A
Sbjct: 95  VVVLAGELLREAEKLVNMKIHPMTIIAGYRMA 126


>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
          Length = 550

 Score = 73.3 bits (172), Expect = 7e-14
 Identities = 37/88 (42%), Positives = 52/88 (59%)
 Frame = +1

Query: 22  DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 201
           D VR  N+       + V++SLGP G+DKM+     +V +TNDGATIL  + +  PAA++
Sbjct: 25  DDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARM 84

Query: 202 LVELAQLQDEEVGDGTTXXXXXXXNYLR 285
           L EL++ QD   GDGTT       + LR
Sbjct: 85  LAELSRSQDAAAGDGTTTVVVLAGSLLR 112


>03_06_0362 +
           33379489-33379624,33380161-33380423,33380524-33380670,
           33380753-33380914,33381681-33381758,33382329-33382462,
           33382702-33382774,33382852-33382929,33383002-33383124,
           33383223-33383317,33383723-33383932,33384115-33384172,
           33384268-33384333
          Length = 540

 Score = 70.9 bits (166), Expect = 4e-13
 Identities = 31/59 (52%), Positives = 45/59 (76%)
 Frame = +1

Query: 70  IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 246
           I ++SLGP G++KM+++ +  + VTND ATI+  LEV+HPAAK+LV   + Q EE+GDG
Sbjct: 37  ITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDG 95



 Score = 35.1 bits (77), Expect = 0.022
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +3

Query: 249 HIVVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPD 380
           ++ +  A ELL+ A+EL++  +HP+ II G   A  + V+ + D
Sbjct: 97  NLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILED 140


>10_08_0620 - 19321612-19323237
          Length = 541

 Score = 64.1 bits (149), Expect = 4e-11
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
 Frame = +1

Query: 22  DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI--GD--VTVTNDGATILKMLEVEHP 189
           D VR  N+          ++SLGP G+DKM+      GD  V +TNDGATIL  + +  P
Sbjct: 25  DDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQP 84

Query: 190 AAKVLVELAQLQDEEVGDGTTXXXXXXXNYLR 285
           AA++L +L++ QD   GDGTT       + LR
Sbjct: 85  AARMLADLSRSQDAAAGDGTTTVVVLAGSLLR 116


>05_01_0337 -
           2658647-2658722,2658797-2658915,2658995-2659102,
           2659187-2659255,2659561-2659655,2659740-2659944,
           2660125-2660211,2660291-2660405,2660696-2660802,
           2661054-2661146,2661243-2661290,2661345-2661544,
           2661993-2662128,2662228-2662291,2662779-2662912
          Length = 551

 Score = 63.7 bits (148), Expect = 5e-11
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = +1

Query: 40  NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 219
           N+       +++K++LGP G  KMLV   GD+ +T DG T+LK +++++P A ++   A 
Sbjct: 22  NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81

Query: 220 LQDEEVGDGTT 252
            QD+  GDGTT
Sbjct: 82  AQDDTSGDGTT 92


>12_01_1011 +
           10292709-10292765,10293003-10293156,10294062-10294183,
           10294288-10294495,10294644-10294789,10294920-10295226,
           10295666-10296117,10296388-10296678
          Length = 578

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
 Frame = +1

Query: 67  NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEE 234
           N V  +LGP G + +L D+ G   V NDG TI + +E+    E+  A ++ E+A   ++ 
Sbjct: 61  NAVGVTLGPRGRNVVL-DEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDS 119

Query: 235 VGDGTT 252
            GDGTT
Sbjct: 120 AGDGTT 125


>02_01_0024 +
           159595-159801,159892-160017,160201-160338,160431-160526,
           160958-161200,161249-161537,161612-161781,161975-162052,
           162156-162227,162345-162449,162555-162647,162737-162829,
           163109-163235,163317-163330
          Length = 616

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = +1

Query: 67  NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEE 234
           ++V  +LGP G + +L    G   + NDG T+ K +E+E P     AK++ + A   ++ 
Sbjct: 77  DLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 136

Query: 235 VGDGTT 252
            GDGTT
Sbjct: 137 AGDGTT 142


>06_01_0097 -
           810283-810296,810398-810521,810974-811066,811144-811236,
           811410-811514,811661-811732,811857-811934,812210-812379,
           812507-812741,812832-813074,813243-813338,813445-813582,
           814014-814139,814235-814453
          Length = 601

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = +1

Query: 67  NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEE 234
           ++V  +LGP G + +L    G   + NDG T+ + +E+E P     AK++ + A   ++ 
Sbjct: 81  DLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDL 140

Query: 235 VGDGTT 252
            GDGTT
Sbjct: 141 AGDGTT 146


>03_06_0760 -
           36067752-36068045,36068260-36068711,36069263-36069569,
           36069719-36069864,36069989-36070196,36070339-36070460,
           36070621-36070789,36070875-36070931
          Length = 584

 Score = 41.1 bits (92), Expect = 3e-04
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +1

Query: 73  VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEEVG 240
           V  +LGP G + +L D+ G   V NDG TI + +E+  P     A ++ E+A   ++  G
Sbjct: 68  VAVTLGPRGRNVVL-DEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAG 126

Query: 241 DGTT 252
           DGTT
Sbjct: 127 DGTT 130


>03_01_0305 -
           2383187-2383298,2383606-2383684,2383762-2383867,
           2383941-2384044,2384141-2384240,2384533-2384628,
           2384724-2384801,2385355-2385423,2385511-2385591,
           2385670-2385759,2385859-2385945,2386022-2386126,
           2386591-2386686,2386796-2386971,2387225-2387384,
           2387898-2388029,2388236-2388260,2389023-2389174
          Length = 615

 Score = 39.9 bits (89), Expect = 8e-04
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +1

Query: 73  VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE----VEHPAAKVLVELAQLQDEEVG 240
           VK ++GP G   ++    G   VT DG T+ K +E    V++  A ++ ++A   ++  G
Sbjct: 96  VKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATNDTAG 155

Query: 241 DGTT 252
           DGTT
Sbjct: 156 DGTT 159


>05_06_0240 -
           26629218-26629323,26629412-26629490,26629656-26629761,
           26629844-26629947,26630069-26630168,26630256-26630351,
           26630464-26630541,26630603-26630671,26630766-26630846,
           26630879-26630935,26631016-26631105,26631192-26631278,
           26631690-26631794,26631899-26631994,26632222-26632397,
           26632847-26633006,26633151-26633600
          Length = 679

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +1

Query: 73  VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPA----AKVLVELAQLQDEEVG 240
           VK ++GP G + ++        VT DG T+ K +E E  A    A ++ ++A+  ++  G
Sbjct: 143 VKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAG 202

Query: 241 DGTT 252
           DGTT
Sbjct: 203 DGTT 206


>10_08_0289 +
           16534063-16534100,16534219-16534243,16534847-16534978,
           16535255-16535441,16536014-16536189,16536282-16536377,
           16536511-16536615,16536654-16536683,16536698-16536784,
           16536874-16536963,16537033-16537113,16537200-16537268,
           16537413-16537490,16537578-16537673,16537981-16538080,
           16538208-16538311,16538396-16538501,16538595-16538673,
           16538861-16538963
          Length = 593

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +1

Query: 97  GLDKMLVDDIGDVTVTNDGATILKMLE----VEHPAAKVLVELAQLQDEEVGDGTT 252
           G + ++    G   VT DG T+ K +E    V++  A ++ ++A   ++  GDGTT
Sbjct: 75  GRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTT 130


>01_06_1809 - 40029628-40030539
          Length = 303

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -1

Query: 87  KGALYYVCYSRCCHYVLCSH--WVSAGSCP 4
           KGA +  C    C   LCS   WVS G+CP
Sbjct: 263 KGAAFIPCGHTFCR--LCSRELWVSRGNCP 290


>07_03_1649 - 28385289-28385358,28387039-28387877
          Length = 302

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 112 LVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 252
           L+ D GDV+  ++   +++ L+ + P + VLV      D +   GTT
Sbjct: 244 LLVDSGDVSAGSEADGVMRWLDGQEPGSVVLVSFG--SDSKTKKGTT 288


>03_03_0113 +
           14550435-14550822,14550831-14551660,14552105-14552278,
           14552350-14552517
          Length = 519

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 267 AAELLKNADELVKTKIHPTSIISGXRXAC 353
           AAEL  +  E + +++ P SI++G R AC
Sbjct: 6   AAELPDDIVEKIISRLPPRSIVTGCRAAC 34


>02_04_0387 - 22548778-22548917,22550635-22550716
          Length = 73

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 54 CCHYVLCSHWVSAGSCPC 1
          CCHY  C  + S  S PC
Sbjct: 45 CCHYDKCYEYCSGDSGPC 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,183,890
Number of Sequences: 37544
Number of extensions: 175140
Number of successful extensions: 396
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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