Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00701
(411 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 133 5e-32
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 133 5e-32
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 89 2e-18
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 87 4e-18
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 87 4e-18
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 87 4e-18
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 83 1e-16
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 83 1e-16
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 83 1e-16
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 82 2e-16
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 80 5e-16
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 80 5e-16
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 69 1e-12
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 62 1e-10
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 62 1e-10
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 41 3e-04
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 41 3e-04
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 29 1.7
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 29 1.7
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 28 2.3
L14429-10|AAL00882.1| 69|Caenorhabditis elegans Cu (copper) ch... 27 4.0
AB017201-1|BAA37144.1| 69|Caenorhabditis elegans copper chaper... 27 4.0
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 27 7.0
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 26 9.2
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 26 9.2
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 26 9.2
AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like ... 26 9.2
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 133 bits (321), Expect = 5e-32
Identities = 65/83 (78%), Positives = 69/83 (83%)
Frame = +1
Query: 4 GTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVE 183
G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK LEVE
Sbjct: 13 GKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE 72
Query: 184 HPAAKVLVELAQLQDEEVGDGTT 252
HPA KVLVELAQLQDEEVGDGTT
Sbjct: 73 HPAGKVLVELAQLQDEEVGDGTT 95
Score = 69.7 bits (163), Expect = 8e-13
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPDNLT 389
VVI+AAELLK ADELVK K+HPT+II+G R AC EAVKYI +N++
Sbjct: 97 VVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENIS 141
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 133 bits (321), Expect = 5e-32
Identities = 65/83 (78%), Positives = 69/83 (83%)
Frame = +1
Query: 4 GTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVE 183
G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK LEVE
Sbjct: 13 GKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE 72
Query: 184 HPAAKVLVELAQLQDEEVGDGTT 252
HPA KVLVELAQLQDEEVGDGTT
Sbjct: 73 HPAGKVLVELAQLQDEEVGDGTT 95
Score = 69.7 bits (163), Expect = 8e-13
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPDNLT 389
VVI+AAELLK ADELVK K+HPT+II+G R AC EAVKYI +N++
Sbjct: 97 VVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENIS 141
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +1
Query: 22 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 201
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 202 LVELAQLQDEEVGDGTT 252
LVEL++ QD E GDGTT
Sbjct: 90 LVELSKAQDIEAGDGTT 106
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +1
Query: 22 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 201
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 202 LVELAQLQDEEVGDGTT 252
LVEL++ QD E GDGTT
Sbjct: 90 LVELSKAQDIEAGDGTT 106
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 87.4 bits (207), Expect = 4e-18
Identities = 38/62 (61%), Positives = 52/62 (83%)
Frame = +1
Query: 67 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 246
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 247 TT 252
TT
Sbjct: 107 TT 108
Score = 33.9 bits (74), Expect = 0.046
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVK 368
VV++A LL+ A++L+ IHP I G AC +A++
Sbjct: 110 VVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 87.4 bits (207), Expect = 4e-18
Identities = 38/62 (61%), Positives = 52/62 (83%)
Frame = +1
Query: 67 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 246
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 247 TT 252
TT
Sbjct: 107 TT 108
Score = 33.9 bits (74), Expect = 0.046
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVK 368
VV++A LL+ A++L+ IHP I G AC +A++
Sbjct: 110 VVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 87.4 bits (207), Expect = 4e-18
Identities = 38/62 (61%), Positives = 52/62 (83%)
Frame = +1
Query: 67 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 246
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 247 TT 252
TT
Sbjct: 107 TT 108
Score = 33.9 bits (74), Expect = 0.046
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVK 368
VV++A LL+ A++L+ IHP I G AC +A++
Sbjct: 110 VVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALE 147
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 186
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 187 PAAKVLVELAQLQDEEVGDGTT 252
PAAKVLV+++ QD EVGDGTT
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTT 97
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXA 350
V ++AAELLK A++LV +IHP +IISG R A
Sbjct: 99 VTVLAAELLKEAEKLVNQRIHPQTIISGYRRA 130
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 186
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 187 PAAKVLVELAQLQDEEVGDGTT 252
PAAKVLV+++ QD EVGDGTT
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTT 97
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXA 350
V ++AAELLK A++LV +IHP +IISG R A
Sbjct: 99 VTVLAAELLKEAEKLVNQRIHPQTIISGYRRA 130
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 186
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 187 PAAKVLVELAQLQDEEVGDGTT 252
PAAKVLV+++ QD EVGDGTT
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTT 97
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXA 350
V ++AAELLK A++LV +IHP +IISG R A
Sbjct: 99 VTVLAAELLKEAEKLVNQRIHPQTIISGYRRA 130
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +1
Query: 10 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 189
R G V+ N+ +++++SLGP + KML+D +G + +TNDG IL+ + V+HP
Sbjct: 18 RESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHP 77
Query: 190 AAKVLVELAQLQDEEVGDGTT 252
AAK ++E+A+ QDEE GDGTT
Sbjct: 78 AAKSMIEIARTQDEETGDGTT 98
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 80.2 bits (189), Expect = 5e-16
Identities = 34/60 (56%), Positives = 49/60 (81%)
Frame = +1
Query: 73 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 252
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGTT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Score = 33.1 bits (72), Expect = 0.081
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPD 380
VV++AAE+LK ++ +HP +I AC + +K + D
Sbjct: 97 VVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLAD 138
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 80.2 bits (189), Expect = 5e-16
Identities = 34/60 (56%), Positives = 49/60 (81%)
Frame = +1
Query: 73 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTT 252
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGTT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Score = 33.1 bits (72), Expect = 0.081
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 255 VVIIAAELLKNADELVKTKIHPTSIISGXRXAC*EAVKYIPD 380
VV++AAE+LK ++ +HP +I AC + +K + D
Sbjct: 97 VVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLAD 138
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 69.3 bits (162), Expect = 1e-12
Identities = 28/76 (36%), Positives = 52/76 (68%)
Frame = +1
Query: 22 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 201
D +N+ + ++S+ GP G++KM+++ I + VTND ATILK LE++HPAA++
Sbjct: 25 DEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARI 84
Query: 202 LVELAQLQDEEVGDGT 249
++ ++Q++++GD T
Sbjct: 85 IIMATEMQEKQIGDNT 100
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 40 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 219
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 220 LQDEEVGDGTT 252
QD+ GDGTT
Sbjct: 83 AQDDVTGDGTT 93
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 258 VIIAAELLKNADELVKTKIHPTSIISGXRXA 350
V++ ELLK A+ LV +HP + G A
Sbjct: 96 VLLIGELLKQAESLVLEGLHPRIVTEGFEWA 126
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 40 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 219
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 220 LQDEEVGDGTT 252
QD+ GDGTT
Sbjct: 83 AQDDVTGDGTT 93
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 258 VIIAAELLKNADELVKTKIHPTSIISGXRXA 350
V++ ELLK A+ LV +HP + G A
Sbjct: 96 VLLIGELLKQAESLVLEGLHPRIVTEGFEWA 126
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 41.1 bits (92), Expect = 3e-04
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 73 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 240
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 241 DGTT 252
DGTT
Sbjct: 102 DGTT 105
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 41.1 bits (92), Expect = 3e-04
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 73 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 240
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 241 DGTT 252
DGTT
Sbjct: 102 DGTT 105
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 159 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVL 37
CG V C+I IVN +L++ W G L Y+ S YVL
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 159 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVL 37
CG V C+I IVN +L++ W G L Y+ S YVL
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 133 VTVTNDGATILKMLEVEHPAAKVLVELAQLQD 228
+T ++G+T+ K++ +EHPA ++ QD
Sbjct: 90 LTAHDEGSTLQKIISIEHPAIVQTFSVSHFQD 121
>L14429-10|AAL00882.1| 69|Caenorhabditis elegans Cu (copper)
chaperonin protein 1 protein.
Length = 69
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 67 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQ 225
N + LG +G DK+ +DDI T T L +V K E+ QLQ
Sbjct: 17 NAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGKEIKQLQ 69
>AB017201-1|BAA37144.1| 69|Caenorhabditis elegans copper chaperone
protein.
Length = 69
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 67 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQ 225
N + LG +G DK+ +DDI T T L +V K E+ QLQ
Sbjct: 17 NAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGKEIKQLQ 69
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 141 DCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVLCSHWVSAGSC 7
DC++ +IV HL+ + L Y C+S Y L + S C
Sbjct: 558 DCSLYDIV-PHLLNQSQISDPLLYYCFSGSWQYPLLPYLASVKPC 601
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform c protein.
Length = 1576
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -1
Query: 156 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 4
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 1233 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 1286
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform b protein.
Length = 1610
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -1
Query: 156 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 4
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 1233 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 1286
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform a protein.
Length = 1595
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -1
Query: 156 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 4
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 1233 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 1286
>AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like
protein KLP-4 protein.
Length = 793
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -1
Query: 156 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 4
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 653 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 706
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,437,403
Number of Sequences: 27780
Number of extensions: 144769
Number of successful extensions: 343
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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