Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00700
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 195 3e-50
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 192 3e-49
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 166 2e-41
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 156 1e-38
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 149 3e-36
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 145 2e-35
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 145 2e-35
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 101 5e-22
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 99 3e-21
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 85 4e-17
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 69 3e-12
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 31 1.1
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 30 1.5
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 30 1.5
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 29 4.5
U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 4.5
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 5.9
Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical pr... 28 7.8
X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein ... 28 7.8
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 195 bits (475), Expect = 3e-50
Identities = 118/224 (52%), Positives = 138/224 (61%), Gaps = 4/224 (1%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 252 MTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*G-KPKIKVAYKGEDKTFFPEEV 425
M P T + + + +S G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 426 SSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXX 605
SSMVL KMKETAEA+LG TV++AV+TVP + + K ++A +N
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATK-DAGAIAGLNVLRIINEPTA 179
Query: 606 XXXXXXXXXXXENEMYLSL--TRRRYFDVSILTIEDGIFEVKST 731
E + + FDVSILTIEDGIFEVKST
Sbjct: 180 AAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 223
Score = 146 bits (355), Expect = 1e-35
Identities = 78/139 (56%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQN-LF-PRGSQ 427
+P+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S + + +N +F P
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 428 FHGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 607
+ + + + AYFNDSQRQATKDAG I+GLNVLRIINEPTAAA
Sbjct: 122 SMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA 181
Query: 608 IAYGLDKKGTGERNVLIFD 664
IAYGLDKKG GERNVLIFD
Sbjct: 182 IAYGLDKKGHGERNVLIFD 200
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 192 bits (467), Expect = 3e-49
Identities = 116/224 (51%), Positives = 136/224 (60%), Gaps = 4/224 (1%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 252 MTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*G-KPKIKVAYKGEDKTFFPEEV 425
M P T + + + +S G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 426 SSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXX 605
SSMVL KMK+TAEA+L TV++AV+TVP T + ++A +N
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVP-TYFNDSQRQATKDAGAIAGLNVLRIINEPTA 179
Query: 606 XXXXXXXXXXXENEMYLSL--TRRRYFDVSILTIEDGIFEVKST 731
E + + FDVSILTIEDGIFEVKST
Sbjct: 180 AAIAYGLDKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 223
Score = 144 bits (350), Expect = 4e-35
Identities = 77/139 (55%), Positives = 93/139 (66%), Gaps = 2/139 (1%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQN-LF-PRGSQ 427
+P+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S + + +N +F P
Sbjct: 62 NPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEIS 121
Query: 428 FHGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 607
+ + + + YFNDSQRQATKDAG I+GLNVLRIINEPTAAA
Sbjct: 122 SMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAAA 181
Query: 608 IAYGLDKKGTGERNVLIFD 664
IAYGLDKKG GERNVLIFD
Sbjct: 182 IAYGLDKKGHGERNVLIFD 200
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 166 bits (403), Expect = 2e-41
Identities = 105/227 (46%), Positives = 137/227 (60%), Gaps = 7/227 (3%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MTP-TTQYSMPNVSS---DVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPE 419
P T + + D S+ CK G+ GKP I+V KGE + F PE
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHW-PFGVKGKQ--GKPVIEVEVKGEKRQFNPE 117
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXX 599
E+S+MVL KMKETAE YLG TV++AVITVP + + K ++A + +N
Sbjct: 118 EISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATK-DAATIAGLNAIRIINEP 176
Query: 600 XXXXXXXXXXXXXENEMYLSL--TRRRYFDVSILTIEDG-IFEVKST 731
++E + + FDVSIL+I +G IFEVKST
Sbjct: 177 TAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKST 223
Score = 128 bits (309), Expect = 4e-30
Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMR-QT*DQGSI*G*RQNLFPRGSQF 430
+P NT+FDAKRLIGR+F+++TVQ+D KHWPF V + + + + G ++ P
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISA 121
Query: 431 HGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 610
+ + + + AYFNDSQRQATKDA TI+GLN +RIINEPTAAA+
Sbjct: 122 MVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAAL 181
Query: 611 AYGLDKKGTGERNVLIFD 664
AYGLDK E+NVLIFD
Sbjct: 182 AYGLDKGIQDEKNVLIFD 199
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 166 bits (403), Expect = 2e-41
Identities = 105/227 (46%), Positives = 137/227 (60%), Gaps = 7/227 (3%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MTP-TTQYSMPNVSS---DVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPE 419
P T + + D S+ CK G+ GKP I+V KGE + F PE
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHW-PFGVKGKQ--GKPVIEVEVKGEKRQFNPE 117
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXX 599
E+S+MVL KMKETAE YLG TV++AVITVP + + K ++A + +N
Sbjct: 118 EISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATK-DAATIAGLNAIRIINEP 176
Query: 600 XXXXXXXXXXXXXENEMYLSL--TRRRYFDVSILTIEDG-IFEVKST 731
++E + + FDVSIL+I +G IFEVKST
Sbjct: 177 TAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKST 223
Score = 128 bits (309), Expect = 4e-30
Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMR-QT*DQGSI*G*RQNLFPRGSQF 430
+P NT+FDAKRLIGR+F+++TVQ+D KHWPF V + + + + G ++ P
Sbjct: 62 NPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISA 121
Query: 431 HGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 610
+ + + + AYFNDSQRQATKDA TI+GLN +RIINEPTAAA+
Sbjct: 122 MVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAAL 181
Query: 611 AYGLDKKGTGERNVLIFD 664
AYGLDK E+NVLIFD
Sbjct: 182 AYGLDKGIQDEKNVLIFD 199
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 156 bits (379), Expect = 1e-38
Identities = 97/224 (43%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVS 428
P T + + + + + GKP ++V KGE + F EE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 429 SMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXX 608
+MVL KMKETAEA LG +V++AVITVP + + K ++A + +N
Sbjct: 121 AMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATK-DAATIAGLNAIRIINEPTAA 179
Query: 609 XXXXXXXXXXENEMYLSL--TRRRYFDVSILTIEDG-IFEVKST 731
+E + + FDVSIL+I +G IFEVKST
Sbjct: 180 ALAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEGSIFEVKST 223
Score = 128 bits (310), Expect = 3e-30
Identities = 66/138 (47%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMR-QT*DQGSI*G*RQNLFPRGSQF 430
+P NT+FDAKRLIGR+F++ TVQ+D+KHWPF V + + + + G ++
Sbjct: 62 NPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISA 121
Query: 431 HGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 610
+ + ++ + + AYFNDSQRQATKDA TI+GLN +RIINEPTAAA+
Sbjct: 122 MVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAAL 181
Query: 611 AYGLDKKGTGERNVLIFD 664
AYGLDK T E+N+LIFD
Sbjct: 182 AYGLDKGITDEKNILIFD 199
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 149 bits (360), Expect = 3e-36
Identities = 93/218 (42%), Positives = 124/218 (56%), Gaps = 4/218 (1%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMTP- 260
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ + P
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 261 TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSSMVL 440
T + + ++ + + + KP ++V E K F PEEVS+MVL
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 441 TKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMN-XXXXXXXX 617
TKMK+ AE+YLG V+NAV+TVP + + K S+A +N
Sbjct: 153 TKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATK-DAGSIAGLNVVRIINEPTAAAIAY 211
Query: 618 XXXXXXXENEMYLSLTRRRYFDVSILTIEDGIFEVKST 731
E + + FDVS+LTI+ G+FEV +T
Sbjct: 212 GLDKKDGERNILVFDLGGGTFDVSLLTIDSGVFEVLAT 249
Score = 126 bits (305), Expect = 1e-29
Identities = 70/138 (50%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQNLF-PRGSQF 430
+P NTIFDAKRLIGR + + TVQ D+KHWPF++V + G F P
Sbjct: 90 NPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 431 HGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 610
+ + S AYFND+Q+QATKDAG+I+GLNV+RIINEPTAAAI
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAI 209
Query: 611 AYGLDKKGTGERNVLIFD 664
AYGLDKK GERN+L+FD
Sbjct: 210 AYGLDKK-DGERNILVFD 226
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 145 bits (352), Expect = 2e-35
Identities = 90/218 (41%), Positives = 121/218 (55%), Gaps = 4/218 (1%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMTP- 260
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 261 TTQYSMPN-VSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSSMV 437
T + + D + K + + KP ++V ++K F PEEVS+MV
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIK-HWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMV 154
Query: 438 LTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXXX 617
L KMKE AE+YLGK V+NAV+TVP + + K
Sbjct: 155 LVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAY 214
Query: 618 XXXXXXXENEMYLSLTRRRYFDVSILTIEDGIFEVKST 731
E + + FDVS+LTI++G+FEV +T
Sbjct: 215 GLDKKDGERNILVFDLGGGTFDVSMLTIDNGVFEVLAT 252
Score = 134 bits (325), Expect = 5e-32
Identities = 72/138 (52%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*D-QGSI*G*RQNLFPRGSQF 430
+P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ + + + P
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 431 HGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 610
+ + S + AYFND+QRQATKDAGTI+GLNV+RIINEPTAAAI
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAI 212
Query: 611 AYGLDKKGTGERNVLIFD 664
AYGLDKK GERN+L+FD
Sbjct: 213 AYGLDKK-DGERNILVFD 229
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 145 bits (352), Expect = 2e-35
Identities = 90/218 (41%), Positives = 121/218 (55%), Gaps = 4/218 (1%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMTP- 260
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ + P
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 261 TTQYSMPN-VSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSSMV 437
T + + D + K + + KP ++V ++K F PEEVS+MV
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIK-HWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMV 154
Query: 438 LTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQKMQVPSLA*TFSESSMNXXXXXXXX 617
L KMKE AE+YLGK V+NAV+TVP + + K
Sbjct: 155 LVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAY 214
Query: 618 XXXXXXXENEMYLSLTRRRYFDVSILTIEDGIFEVKST 731
E + + FDVS+LTI++G+FEV +T
Sbjct: 215 GLDKKDGERNILVFDLGGGTFDVSMLTIDNGVFEVLAT 252
Score = 134 bits (325), Expect = 5e-32
Identities = 72/138 (52%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*D-QGSI*G*RQNLFPRGSQF 430
+P NTIFDAKRLIGR + D TVQAD+KHWPF+V+ + + + P
Sbjct: 93 NPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSA 152
Query: 431 HGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 610
+ + S + AYFND+QRQATKDAGTI+GLNV+RIINEPTAAAI
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAI 212
Query: 611 AYGLDKKGTGERNVLIFD 664
AYGLDKK GERN+L+FD
Sbjct: 213 AYGLDKK-DGERNILVFD 229
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 101 bits (242), Expect = 5e-22
Identities = 63/137 (45%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQNLFPRGSQFHGAY 442
NT+F KRLIGR++ED VQ D+K P+++V G Q SQ GA+
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKA----SNGDAWVEAQGKVYSPSQV-GAF 147
Query: 443 ---ENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIA 613
+ + S AYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+A
Sbjct: 148 VLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALA 207
Query: 614 YGLDKKGTGERNVLIFD 664
YGLD K G++ + ++D
Sbjct: 208 YGLD-KDAGDKIIAVYD 223
Score = 89.4 bits (212), Expect = 2e-18
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Frame = +3
Query: 78 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ-VA 251
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q V
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 252 MTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSS 431
+ T ++ + + K + + + + K + P +V +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQK---DLKVVPYKIVKASNGDAWVEAQGKVYSPSQVGA 146
Query: 432 MVLTKMKETAEAYLGKTVQNAVITVP 509
VL KMKETAE+YLG TV NAV+TVP
Sbjct: 147 FVLMKMKETAESYLGTTVNNAVVTVP 172
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 99.1 bits (236), Expect = 3e-21
Identities = 63/137 (45%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQNLFPRGSQFHGAY 442
NT+F KRLIGR++ED VQ D+K P+++V G Q SQ GA+
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKA----SNGDAWVEAQGKEYPPSQV-GAF 147
Query: 443 ---ENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIA 613
+ + S AYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+A
Sbjct: 148 VLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALA 207
Query: 614 YGLDKKGTGERNVLIFD 664
YGLD K G++ + ++D
Sbjct: 208 YGLD-KDAGDKIIAVYD 223
Score = 86.2 bits (204), Expect = 2e-17
Identities = 56/146 (38%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 78 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ-VA 251
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q V
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 252 MTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSS 431
+ T ++ + + K + + + + K + P +V +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQK---DLKVVPYKIVKASNGDAWVEAQGKEYPPSQVGA 146
Query: 432 MVLTKMKETAEAYLGKTVQNAVITVP 509
VL KMKETAE+YLG TV N V+TVP
Sbjct: 147 FVLMKMKETAESYLGTTVNNPVVTVP 172
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 85.4 bits (202), Expect = 4e-17
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQNLFPRGSQFHGAY 442
N++FD KR+IGR+++D +Q DM WPF+V D I + + +F
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEK-----DDNGIPYLEIHKNEKPLKFSAVT 115
Query: 443 ENEGNCRSLSWQNCAECSXHGS-------AYFNDSQRQATKDAGTISGLNVLRIINEPTA 601
+ R L + + AYFN +QR+AT++A I+GL VLRI+NEPTA
Sbjct: 116 VSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTA 175
Query: 602 AAIAYGLDKKGTGERNVLIFD 664
AAIAY L + RN+LI+D
Sbjct: 176 AAIAYSLKGQRLSRRNILIYD 196
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMTPT 263
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 264 TQYSMPNVSSDVSSKMLLCK--PT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSSMV 437
+ + + + +LL + P + + G P +++ + F VSS++
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEK-DDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 438 LTKMKETAEAYLGKTVQNAVITVP 509
L +K AE LG V++AVITVP
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVP 144
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 85.4 bits (202), Expect = 4e-17
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQGSI*G*RQNLFPRGSQFHGAY 442
N++FD KR+IGR+++D +Q DM WPF+V D I + + +F
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEK-----DDNGIPYLEIHKNEKPLKFSAVT 115
Query: 443 ENEGNCRSLSWQNCAECSXHGS-------AYFNDSQRQATKDAGTISGLNVLRIINEPTA 601
+ R L + + AYFN +QR+AT++A I+GL VLRI+NEPTA
Sbjct: 116 VSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTA 175
Query: 602 AAIAYGLDKKGTGERNVLIFD 664
AAIAY L + RN+LI+D
Sbjct: 176 AAIAYSLKGQRLSRRNILIYD 196
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMTPT 263
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 264 TQYSMPNVSSDVSSKMLLCK--PT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSSMV 437
+ + + + +LL + P + + G P +++ + F VSS++
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEK-DDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 438 LTKMKETAEAYLGKTVQNAVITVP 509
L +K AE LG V++AVITVP
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVP 144
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 68.9 bits (161), Expect = 3e-12
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Frame = +2
Query: 254 DPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVV--SMRQT*DQGSI*G*RQNLFPR- 418
+P TI+DAKR IGR FE + +D K +PF++ S + + + +N++P
Sbjct: 94 NPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEE 153
Query: 419 -GSQFHGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEP 595
GS G Y + L + A FN+ QR T A I+ + V R+I+EP
Sbjct: 154 IGSLIIG-YLKSAAAKHLG-VTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEP 211
Query: 596 TAAAIAYGLDKKGTGERNVLIFD 664
TAAA+AYGL KK G NV++ D
Sbjct: 212 TAAALAYGLHKK-QGVENVVVVD 233
Score = 62.1 bits (144), Expect = 4e-10
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Frame = +3
Query: 63 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIG 227
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 228 DAAKNQVAMTPT-TQYSMPNV---SSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKG 395
A Q P T Y + + ++K L L GK ++
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144
Query: 396 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
K +PEE+ S+++ +K A +LG T+ VI+ P
Sbjct: 145 GTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCP 182
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 59.7 bits (138), Expect = 2e-09
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMT-PTT 266
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V T
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 267 QYSMPNV-----SSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPEEVSS 431
+ ++ S V+ + + P L + ++V+Y GE TF PE+V +
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDI----GVQVSYLGEPHTFTPEQVLA 119
Query: 432 MVLTKMKETAEAYLG--KTVQNAVITVP 509
+LTK++ E+ L K V + V+ VP
Sbjct: 120 ALLTKLRTIVESQLSDVKKVSDCVLAVP 147
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Frame = +2
Query: 263 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSMRQT*DQG---SI*G*RQNLFPRG--SQ 427
NT+ + K LIGRKF D Q + P +VV + D G S G P +
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPND-DIGVQVSYLGEPHTFTPEQVLAA 120
Query: 428 FHGAYENEGNCRSLSWQNCAECSXHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 607
+ + ++C +YF D QR+A A +GLN LRI+NE TA A
Sbjct: 121 LLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIA 180
Query: 608 IAYGLDKKGTGE-----RNVLIFD 664
+AYG+ K+ E RNV+ D
Sbjct: 181 LAYGIYKQDLPEEDAKSRNVVFLD 204
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Frame = +3
Query: 75 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 252 MTPTTQY----SMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPE 419
P + Y SM + + K T V + + YK E+K + E
Sbjct: 68 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEV--RKTVVFPYK-EEK-YNVE 123
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
+ +M+L K+ EAY +TV++ VITVP
Sbjct: 124 TLLAMILWNAKKVTEAYADQTVKDVVITVP 153
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/58 (37%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = +2
Query: 512 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLIFDSAAV 676
+ N ++R+A A I+GLN+L+++N+ +AAA+ YG+ +K E+ ++LI+D AV
Sbjct: 155 FLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTHMLIYDMGAV 212
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Frame = +3
Query: 75 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 251
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 252 MTPTTQY----SMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPKIKVAYKGEDKTFFPE 419
P + Y SM + + K T V + + YK E+K + E
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEV--RKTVVFPYK-EEK-YNVE 139
Query: 420 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
+ +M+L K+ EAY +TV++ VITVP
Sbjct: 140 TLLAMILWNAKKVTEAYADQTVKDVVITVP 169
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/58 (37%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = +2
Query: 512 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLIFDSAAV 676
+ N ++R+A A I+GLN+L+++N+ +AAA+ YG+ +K E+ ++LI+D AV
Sbjct: 171 FLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTHMLIYDMGAV 228
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +2
Query: 512 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLIFDSAA 673
YF ++R A + A ++GL VL++IN+ TAAA+++G+ +K GE+ ++++D A
Sbjct: 171 YFTPAERLAVERAAQMAGLTVLQLINDGTAAALSHGIFRRKEIGEKPQRLMVYDMGA 227
Score = 41.1 bits (92), Expect = 8e-04
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPT 263
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 264 TQYSMPNVSSDVSSKMLLCKPT*STGLSR---LSV*GKPK--IKVAYKGEDKTFFPEEVS 428
+ N D+ K P+ R V PK + +K +++ E ++
Sbjct: 86 LVHGQLN---DLVGKSTQ-HPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALT 141
Query: 429 SMVLTKMKETAEAYL-GKTVQNAVITVP 509
+M+L K+ E Y +++ VITVP
Sbjct: 142 AMILANAKKFTEEYAQAAEIKDVVITVP 169
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 203 HRHRASHRR--CRQEPGGDDPNNTIFDAKRLIGR-KFEDATVQADM 331
H+HR SHR Q+ GD+ NN + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 233 RQEPGGDDPNNTIFDAKRLIGRKFEDATVQAD 328
++ GDDP+ F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 266 CCWGHRHLVLGGISDETLGVCERNIRRSGPVA 171
CC G H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 195 VAFTDTERLIGDAAKNQVAMTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPK 374
V FT+T + +++ P+T S+P S+ VSS + +P ++ S + GK K
Sbjct: 1315 VEFTETPNKNSEEDDHKIPNIPSTSTSIPPASTVVSSVSVKGRPAPASRKSSIDTAGKDK 1374
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 195 VAFTDTERLIGDAAKNQVAMTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSV*GKPK 374
V FT+T + +++ P+T S+P S+ VSS + +P ++ S + GK K
Sbjct: 1301 VEFTETPNKNSEEDDHKIPNIPSTSTSIPPASTVVSSVSVKGRPAPASRKSSIDTAGKDK 1360
>U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical
protein F08B1.3 protein.
Length = 460
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 706 SSMVRMDTSKYRRRVKDKYISFS-STLFVKTVSNRSSSR 593
+S++ TS ++ KY FS S +F T+SN SSSR
Sbjct: 90 ASLLGSRTSGRKKSTASKYNGFSASRMFSSTISNASSSR 128
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/54 (22%), Positives = 29/54 (53%)
Frame = +3
Query: 165 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQYSMPNVSSDVSSKMLLCKP 326
D G+ ++V D +++IG+ + + T+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 243
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical
protein C08B11.1 protein.
Length = 799
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 439 STMELTSSGKKVLSSPLYATLILGLPHTDNLERPV-LHVGLHSSIFELTS 293
S +E+ + +V+++ ++I L H NL+RP + LHS ++L S
Sbjct: 325 SLIEIPNRNLQVINTVSRRSIIFALSHYANLDRPAFITHALHSVYYQLQS 374
>X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein
protein.
Length = 799
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 439 STMELTSSGKKVLSSPLYATLILGLPHTDNLERPV-LHVGLHSSIFELTS 293
S +E+ + +V+++ ++I L H NL+RP + LHS ++L S
Sbjct: 325 SLIEIPNRNLQVINTVSRRSIIFALSHYANLDRPAFITHALHSVYYQLQS 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,428,300
Number of Sequences: 27780
Number of extensions: 416597
Number of successful extensions: 1357
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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