Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00699
(760 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 169 3e-44
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 25 0.50
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 25 0.50
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 0.66
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.87
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.87
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.87
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.87
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.87
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 2.6
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 23 2.6
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 169 bits (410), Expect = 3e-44
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDKIRYESLT+PS+LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGT
Sbjct: 49 LDKIRYESLTNPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGT 108
Query: 433 KAFMEALQAGADISMIGQFGVGFYS 507
KAFMEALQAGADISMIGQFGVGFYS
Sbjct: 109 KAFMEALQAGADISMIGQFGVGFYS 133
Score = 124 bits (300), Expect = 6e-31
Identities = 60/83 (72%), Positives = 65/83 (78%)
Frame = +3
Query: 510 YLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXX 689
YLVAD+VTV SK+NDDEQYVWESSAGGSFTV D GEPLGRGTKIVLH+KED EF+
Sbjct: 135 YLVADKVTVVSKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEH 194
Query: 690 XXXXXXXXXSQFIGYPIKLMVEK 758
SQFIGYPIKL+VEK
Sbjct: 195 KIKEIVKKHSQFIGYPIKLVVEK 217
Score = 84.6 bits (200), Expect = 8e-19
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +2
Query: 104 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 253
MPEE Q +VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA
Sbjct: 1 MPEE--NQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 48
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.50
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 142 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKY 26
F R+LCL F+ +F Y +++ ++ + G ++ Q A Y
Sbjct: 75 FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 115
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 25.4 bits (53), Expect = 0.50
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 142 FNLRWLCLHFFRHFLY-CFLFNSH-KMTRGFLTHVFQSAKY 26
F R+LCL F+ +F Y +++ ++ + G ++ Q A Y
Sbjct: 31 FMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 71
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.0 bits (52), Expect = 0.66
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -3
Query: 683 FHEFCQVLFDVKDDLCTSTKGLTAVWADCERASCRR 576
+H L + K C G W +C++A+C +
Sbjct: 861 YHPSIVSLGEYKCVTCKCENGKPTCWRECDKATCEK 896
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.87
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 594 FTVRPDSGEPLGRGTKIVL 650
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.87
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 594 FTVRPDSGEPLGRGTKIVL 650
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.87
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 594 FTVRPDSGEPLGRGTKIVL 650
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.87
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 594 FTVRPDSGEPLGRGTKIVL 650
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.87
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 594 FTVRPDSGEPLGRGTKIVL 650
FT+ PDSGE L G I+L
Sbjct: 233 FTLPPDSGEKLTLGVTILL 251
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 403 CSPNRPWSYQYRYR 362
C P RPW Y +R
Sbjct: 522 CDPYRPWQTVYNHR 535
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 257 TKSGMNLSRIRQNSIVAKSCTSRSFPTRTRALL 355
++SG+N N++ A + + +PT T +L
Sbjct: 368 SQSGINYKDTNDNNVSAVTTQHQGYPTNTVTIL 400
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,597
Number of Sequences: 336
Number of extensions: 4190
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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