Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00699
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0042 + 473912-474058,474208-474349,474442-476264 139 2e-33
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 139 3e-33
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 138 3e-33
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 138 3e-33
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 101 8e-22
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 99 2e-21
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 97 1e-20
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 89 5e-18
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 31 1.00
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044... 29 3.0
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.0
08_02_1579 + 27997714-27998199,27998718-27998789,27999073-279991... 29 4.0
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 28 9.3
05_04_0230 + 19250513-19250633,19250681-19251165 28 9.3
01_03_0113 - 12647599-12648052,12648078-12648319 28 9.3
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 139 bits (337), Expect = 2e-33
Identities = 65/85 (76%), Positives = 77/85 (90%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDKIR+ESLTD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGT
Sbjct: 51 LDKIRFESLTDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGT 110
Query: 433 KAFMEALQAGADISMIGQFGVGFYS 507
K FMEALQAGAD+SMIGQFGVGFYS
Sbjct: 111 KEFMEALQAGADVSMIGQFGVGFYS 135
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 YLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXX 686
YLVA++V V +KHNDDEQYVWES AGGSFTV D +GE LGRGTKI L +K+D E++
Sbjct: 137 YLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITLFLKDDQLEYLEE 196
Query: 687 XXXXXXXXXXSQFIGYPIKLMVEK 758
S+FI YPI L EK
Sbjct: 197 RRLKDLVKKHSEFISYPIYLWSEK 220
Score = 79.4 bits (187), Expect = 3e-15
Identities = 45/65 (69%), Positives = 49/65 (75%)
Frame = +2
Query: 119 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA*TKSGMNLSRIRQNS 298
+ Q AE ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDA L +IR S
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDA-------LDKIRFES 58
Query: 299 IVAKS 313
+ KS
Sbjct: 59 LTDKS 63
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 139 bits (336), Expect = 3e-33
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDKIR+ESLTD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGT
Sbjct: 44 LDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGT 103
Query: 433 KAFMEALQAGADISMIGQFGVGFYS 507
K FMEAL AGAD+SMIGQFGVGFYS
Sbjct: 104 KEFMEALAAGADVSMIGQFGVGFYS 128
Score = 101 bits (243), Expect = 5e-22
Identities = 50/84 (59%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 YLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKEDLAEFMXX 686
YLVA+RV V +KHNDDEQYVWES AGGSFTV R SGE LGRGTKI L++K+D E++
Sbjct: 130 YLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEE 189
Query: 687 XXXXXXXXXXSQFIGYPIKLMVEK 758
S+FI YPI L EK
Sbjct: 190 RRLKDLIKKHSEFISYPISLWTEK 213
Score = 77.0 bits (181), Expect = 2e-14
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +2
Query: 131 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA*TKSGMNLSRIRQNSIVAK 310
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDA L +IR S+ K
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDA-------LDKIRFESLTDK 55
Query: 311 S 313
S
Sbjct: 56 S 56
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 138 bits (335), Expect = 3e-33
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDKIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGT
Sbjct: 44 LDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGT 103
Query: 433 KAFMEALQAGADISMIGQFGVGFYS 507
K FMEAL AGAD+SMIGQFGVGFYS
Sbjct: 104 KEFMEALAAGADVSMIGQFGVGFYS 128
Score = 101 bits (243), Expect = 5e-22
Identities = 50/84 (59%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 YLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKEDLAEFMXX 686
YLVA+RV V +KHNDDEQYVWES AGGSFTV R SGE LGRGTKI L++K+D E++
Sbjct: 130 YLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEE 189
Query: 687 XXXXXXXXXXSQFIGYPIKLMVEK 758
S+FI YPI L EK
Sbjct: 190 RRLKDLVKKHSEFISYPISLWTEK 213
Score = 77.0 bits (181), Expect = 2e-14
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +2
Query: 131 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA*TKSGMNLSRIRQNSIVAK 310
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDA L +IR S+ K
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDA-------LDKIRFESLTDK 55
Query: 311 S 313
S
Sbjct: 56 S 56
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 138 bits (335), Expect = 3e-33
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDKIR+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGT
Sbjct: 44 LDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGT 103
Query: 433 KAFMEALQAGADISMIGQFGVGFYS 507
K FMEAL AGAD+SMIGQFGVGFYS
Sbjct: 104 KEFMEALAAGADVSMIGQFGVGFYS 128
Score = 101 bits (243), Expect = 5e-22
Identities = 50/84 (59%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 YLVADRVTVHSKHNDDEQYVWESSAGGSFTV-RPDSGEPLGRGTKIVLHVKEDLAEFMXX 686
YLVA+RV V +KHNDDEQYVWES AGGSFTV R SGE LGRGTKI L++K+D E++
Sbjct: 130 YLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEE 189
Query: 687 XXXXXXXXXXSQFIGYPIKLMVEK 758
S+FI YPI L EK
Sbjct: 190 RRLKDLVKKHSEFISYPISLWTEK 213
Score = 77.0 bits (181), Expect = 2e-14
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +2
Query: 131 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA*TKSGMNLSRIRQNSIVAK 310
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDA L +IR S+ K
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDA-------LDKIRFESLTDK 55
Query: 311 S 313
S
Sbjct: 56 S 56
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 101 bits (241), Expect = 8e-22
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKS 426
LDKIR+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKS
Sbjct: 143 LDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKS 202
Query: 427 GTKAFMEALQAGADISMIGQFGVGFYSI 510
GT AF+E +Q G D+++IGQFGVGFYS+
Sbjct: 203 GTSAFVEKMQTGGDLNLIGQFGVGFYSV 230
Score = 84.2 bits (199), Expect = 1e-16
Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 YLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXX 686
YLVAD V V SKHNDD+Q+VWES A GSF + D+ EPLGRGT+I LH++++ E++
Sbjct: 231 YLVADYVEVISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEE 290
Query: 687 XXXXXXXXXXSQFIGYPIKLMVEK 758
S+FI +PI L K
Sbjct: 291 DKLKDLVKKYSEFINFPIYLWATK 314
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +2
Query: 119 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 253
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDA
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDA 142
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 99 bits (238), Expect = 2e-21
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDK+RY S+TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT
Sbjct: 391 LDKLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGT 450
Query: 433 KAFMEAL----QAGADISMIGQFGVGFYS 507
F++AL +AG D ++IGQFGVGFYS
Sbjct: 451 AKFLKALKESQEAGVDSNLIGQFGVGFYS 479
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2
Query: 110 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 253
+ +T P VE +QAE+ +LM LI+++ YSNKE+FLREL+SN+SDA
Sbjct: 345 DSSDTPP--VEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDA 390
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = +3
Query: 510 YLVADRVTVHSKH-NDDEQYVWESSA-GGSFTVRP--DSGEPLGRGTKIVLHVKEDLAEF 677
+LV+D+V V +K D+QYVWE A S+T+R D + L RGT++ L++K + F
Sbjct: 481 FLVSDKVAVSTKSPKSDKQYVWEGEAESSSYTIREETDPEKLLPRGTRLTLYLKREDKGF 540
Query: 678 MXXXXXXXXXXXXSQFIGYPIKLMVEK 758
SQF+ +PI EK
Sbjct: 541 AHPEKIQKLVKNYSQFVSFPIYTWQEK 567
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 97.5 bits (232), Expect = 1e-20
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGT 432
LDK+R+ +TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT
Sbjct: 380 LDKLRFLGVTDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGT 439
Query: 433 KAFMEALQ----AGADISMIGQFGVGFYS 507
F++AL+ GAD +IGQFGVGFYS
Sbjct: 440 SKFLKALKENKDLGADNGLIGQFGVGFYS 468
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/47 (55%), Positives = 38/47 (80%)
Frame = +2
Query: 113 EMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 253
E + AE E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDA
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDA 379
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +3
Query: 510 YLVADRVTVHSKH-NDDEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAE 674
+LVA++V V +K D+QYVWE A S V + +P L RGT+I L ++ +D E
Sbjct: 470 FLVAEKVVVSTKSPKSDKQYVWEGVADSSSYVIKEETDPEKMLTRGTQITLVLRPDDKFE 529
Query: 675 FMXXXXXXXXXXXXSQFIGYPIKLMVEK 758
F SQF+ +PI EK
Sbjct: 530 FADPGRIQGLVKNYSQFVSFPIYTWQEK 557
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 88.6 bits (210), Expect = 5e-18
Identities = 52/98 (53%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +1
Query: 253 LDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNN 405
LDK+R+ S+TD S L G EL I+I P+ GT+TI DTGIGMTK +L +
Sbjct: 121 LDKLRFLSVTDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDC 180
Query: 406 LGTIAKSGTKAFMEALQ----AGADISMIGQFGVGFYS 507
LGTIA+SGT F++AL+ GAD +IGQFGVGFYS
Sbjct: 181 LGTIAQSGTSKFLKALKENKDLGADNGLIGQFGVGFYS 218
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +2
Query: 125 QPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 253
+ A E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDA
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDA 120
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 510 YLVADRVTVHSKH-NDDEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAE 674
+LVA++V V +K D+QYVWE+ A S V + +P L RGT+I L ++ +D E
Sbjct: 220 FLVAEKVVVSTKSPKADKQYVWEAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYE 279
Query: 675 FMXXXXXXXXXXXXSQFIGYPIKLMVEK 758
F SQF+ +PI EK
Sbjct: 280 FADPGRIQGLVKNYSQFVSFPIYTWQEK 307
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 31.1 bits (67), Expect = 1.00
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Frame = +1
Query: 361 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVGFYSITW--S 519
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG ++ +
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAA 159
Query: 520 LTA*LFTLNTMTTSNTC----GNLLQEARSQSAQTAVSPLVEVQRSSFTSKRTWQNSWKN 687
A +N T + G L + +++ A + L V + T T Q W+
Sbjct: 160 TEAGCLVVNAPTANTVAAAEHGIALLASMARNVSQADAALKAVYSRTLT-VFTAQGKWQR 218
Query: 688 TK 693
TK
Sbjct: 219 TK 220
>06_03_0788 -
24603849-24603949,24604030-24604123,24604206-24604413,
24604727-24604839,24605679-24605816,24605916-24605999,
24606517-24606675,24606754-24606837,24607505-24607840,
24607941-24608042,24608970-24609153,24609699-24610044,
24610444-24610591,24611053-24611203,24611786-24611867,
24612314-24612362
Length = 792
Score = 29.5 bits (63), Expect = 3.0
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +1
Query: 283 DPSKLD-SGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 459
D S+L+ S K L+ K +K L++ID G GMT A+++ + K K +
Sbjct: 256 DASRLNISVKSLFSKKA-DKKIPVLSVIDDGHGMTCAEMMRMISFGHKRPDKQRQD---- 310
Query: 460 GADISMIGQFGVGFYSITWSLTA*LFTLNTMTTSNTCGNLLQEARSQSAQTAVSPLVEVQ 639
IG+FG+GF + L L T T+S+ L ++ +++ P+V +
Sbjct: 311 -----QIGRFGIGFKTGAMKLGRDAIVL-TQTSSSRSVAFLSQSFNENKDNLEIPVVTYR 364
Query: 640 R 642
+
Sbjct: 365 K 365
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 309 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 476
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>08_02_1579 +
27997714-27998199,27998718-27998789,27999073-27999120,
27999203-27999357,27999477-27999671,27999743-27999854,
27999955-28000024,28000110-28000168,28000251-28000374,
28000465-28000535,28001053-28001154,28001242-28001322,
28001504-28001662,28001757-28001807
Length = 594
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 250 RLDKIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADL 396
RL++IR +++D KL+ + +I K++G + G+G+T ADL
Sbjct: 24 RLERIRATAVSDEPKLN---KYSARITEPKSQGASQAVLYGVGLTDADL 69
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 579 SAGGSFTVRPDSGEPLGRGTK 641
SA G+ RP + PLGRGT+
Sbjct: 19 SAAGAVVGRPSTARPLGRGTR 39
>05_04_0230 + 19250513-19250633,19250681-19251165
Length = 201
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 626 WSRYKDRPSRQRGLGRIHGRTQNQRDR 706
W R + RP+ G G GR Q +RDR
Sbjct: 163 WRRERGRPAAGAGSGGSGGRWQRERDR 189
>01_03_0113 - 12647599-12648052,12648078-12648319
Length = 231
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -3
Query: 596 ERASCRRFPHVLLVVIVFRVNSHAVSDQVME*KPTPNCP 480
+ CRRF H+ V V+ + +DQ + NCP
Sbjct: 180 DSTKCRRFKHIAKAVRVYNLQDDTFADQYTQ-SSWKNCP 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,271,576
Number of Sequences: 37544
Number of extensions: 490914
Number of successful extensions: 1226
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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