Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00698
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 73 1e-13
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 64 8e-11
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 64 1e-10
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 56 2e-08
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 56 2e-08
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 56 2e-08
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 56 2e-08
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 29 2.1
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 28 6.6
Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +2
Query: 26 KWWVLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEA 205
K+ +LPLHS +T+ EQ +VF P G RKII+STNIAE+SIT+ D+ YV+D C K
Sbjct: 690 KYEILPLHSQLTSQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMY 748
Query: 206 DAITNFTSLKLCWASK 253
+ N WASK
Sbjct: 749 TSNNNMVHFATVWASK 764
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +3
Query: 552 DLTYMGRIMAKLPIDVRASKLIVLGYVYG 638
+LT +G+++A++PI+ +K+++LG G
Sbjct: 856 ELTSLGKMLARMPIEPVIAKVLILGTALG 884
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/79 (41%), Positives = 54/79 (68%)
Frame = +2
Query: 29 WWVLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEAD 208
W +L LHST++ +EQ +VF +AP+G RK ILSTN+AE+S+T+ I++V+D + +++ +
Sbjct: 340 WIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHE 399
Query: 209 AITNFTSLKLCWASKKTAS 265
T L W SK +A+
Sbjct: 400 PGTGTQKLTEFWVSKASAN 418
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Frame = +2
Query: 35 VLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVD--FCLMKV 196
VLP++S + +D Q ++FQRAP G RK I++TNIAE+S+TV I +V+D FC MKV
Sbjct: 685 VLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKV 740
Score = 33.9 bits (74), Expect = 0.100
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 549 GDLTYMGRIMAKLPIDVRASKLIVLGYVYGCLD 647
G LT MGR M + P+D SK++++ GC D
Sbjct: 847 GQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSD 879
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Frame = +2
Query: 35 VLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVD--FCLMKV 196
VLP++S + +D Q ++FQRAP G RK I++TNIAE+S+TV I +V+D FC MKV
Sbjct: 685 VLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKV 740
Score = 33.9 bits (74), Expect = 0.100
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 549 GDLTYMGRIMAKLPIDVRASKLIVLGYVYGCLD 647
G LT MGR M + P+D SK++++ GC D
Sbjct: 847 GQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSD 879
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +2
Query: 32 WVLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADA 211
WV+P + + A EQ++ F P G RK++++TNIAE+SIT+P I YV+D +K+ A
Sbjct: 330 WVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHA 389
Query: 212 ITNFTSLKLCWASKKTA 262
+L SK +A
Sbjct: 390 ANGVETLMRVTVSKASA 406
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +2
Query: 32 WVLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADA 211
+ LPL+S ++ +Q RVF P G R ++STN+AE+S+T+P +KYV+D K D+
Sbjct: 576 YCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDS 635
Query: 212 ITNFTSLKLCWASK 253
IT + +C S+
Sbjct: 636 ITGVSRFAVCRISQ 649
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +2
Query: 38 LPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAIT 217
+PL++ + ++Q F++ P G RK+I+STNIAE+S+T+P I+ V+D +K +A
Sbjct: 417 VPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFN 476
Query: 218 NFTSLKLCWASKKTA 262
LK+ SK A
Sbjct: 477 RIDVLKVHNVSKAQA 491
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +2
Query: 38 LPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAIT 217
LP+++ + +D Q ++F+ P RK++L+TNIAE+S+T+ I YV+D K DA +
Sbjct: 611 LPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARS 670
Query: 218 NFTSLKLCWASKKTAS 265
L + SK A+
Sbjct: 671 GVEHLHVVTISKAAAN 686
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 549 GDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
G+LT +GR MA+ P D SK+I+ Y C
Sbjct: 772 GELTKLGRRMAEFPCDPCMSKMIIASEKYEC 802
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +2
Query: 38 LPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAIT 217
LP+++ + +D Q ++F+ P RK++L+TNIAE+S+T+ I YV+D K DA +
Sbjct: 611 LPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARS 670
Query: 218 NFTSLKLCWASKKTAS 265
L + SK A+
Sbjct: 671 GVEHLHVVTISKAAAN 686
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 549 GDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
G+LT +GR MA+ P D SK+I+ Y C
Sbjct: 772 GELTKLGRRMAEFPCDPCMSKMIIASEKYEC 802
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +2
Query: 35 VLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVD 178
+LP++ + ++ Q R+F AP G RK++++TNIAE+S+T+ I YVVD
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVD 831
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 546 DGDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
DG LT +GR MA+ P++ SKL+++ GC
Sbjct: 945 DGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGC 976
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +2
Query: 38 LPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAIT 217
LP+++ + +D Q ++F+ P RK++L+TNIAE+S+T+ I YV+D K DA +
Sbjct: 611 LPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARS 670
Query: 218 NFTSLKLCWASKKTAS 265
L + SK A+
Sbjct: 671 GVEHLHVVTISKAAAN 686
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 549 GDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
G+LT +GR MA+ P D SK+I+ Y C
Sbjct: 772 GELTKLGRRMAEFPCDPCMSKMIIASEKYEC 802
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 56.0 bits (129), Expect = 2e-08
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = +2
Query: 35 VLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVD 178
+LP++ + ++ Q R+F AP G RK++++TNIAE+S+T+ I YVVD
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVD 831
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 546 DGDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
DG LT +GR MA+ P++ SKL+++ GC
Sbjct: 945 DGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGC 976
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +2
Query: 35 VLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAI 214
VLPLHS +T+ +F+ P RKIIL+TNIAE+SIT+ D+ +VVD +K D
Sbjct: 679 VLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHE 738
Query: 215 TNFTSLKLCWASKKTASSEPVAQAACVTDAY 307
++L + ++ A +A V + Y
Sbjct: 739 AKLSTLTVKPIARSNADQRS-GRAGRVANGY 768
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 525 DNEWSSSDGDLTYMGRIMAKLPIDVRASKLIVLGYVYGCL 644
+N + D +LT +GR+MA+LP+D + S++++ G CL
Sbjct: 863 ENSENPEDPELTDLGRLMARLPLDPQLSRMLLFGLALKCL 902
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 313 LVTDKFYDSLRDECPPEIVRCPLERLALLAKMLDMGPP--SDILALAMDPPDMSNIHRTV 486
L T++ Y+S+ + E+ R + + L AK+ S+ L+LA +PP+ +I + +
Sbjct: 772 LYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAI 831
Query: 487 LVLKEIG 507
L++IG
Sbjct: 832 TFLEQIG 838
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +2
Query: 38 LPLHSTITADEQVRVFQRAPLGH------RKIILSTNIAESSITVPDIKYVVDFCLMKVL 199
+PL+ST+ Q R+F+ AP RK ++STNIAE+S+T+ + +V+D K
Sbjct: 330 IPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQK 389
Query: 200 EADAITNFTSLKLCWASKKTA 262
+ SL +C SK +A
Sbjct: 390 VYNPRIRVESLLVCPISKASA 410
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 540 SSDGDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
+ DG+LT +G +MA+ P+D + +K+++ C
Sbjct: 494 NDDGELTELGSLMAEFPLDPQLAKMLITSTELNC 527
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +2
Query: 38 LPLHSTITADEQVRVFQRAPLGH------RKIILSTNIAESSITVPDIKYVVDFCLMKVL 199
+PL+ST+ Q R+F+ AP RK ++STNIAE+S+T+ + +V+D K
Sbjct: 330 IPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQK 389
Query: 200 EADAITNFTSLKLCWASKKTA 262
+ SL +C SK +A
Sbjct: 390 VYNPRIRVESLLVCPISKASA 410
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 540 SSDGDLTYMGRIMAKLPIDVRASKLIVLGYVYGC 641
+ DG+LT +G +MA+ P+D + +K+++ C
Sbjct: 494 NDDGELTELGSLMAEFPLDPQLAKMLITSTELNC 527
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 74 VRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAITN 220
+++ AP H +L I +S T+P++ VV CL L++D I N
Sbjct: 538 LQMLSDAP-AHNLFVLMAPIDKSRKTIPEVLAVVQVCLEGRLDSDNIQN 585
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 516 KTLDNEWSSSDGDLTYMGRIMAKLPIDVRASKLIVLGYVYG 638
+T+ N W + D G++ +K+ + +K + + Y YG
Sbjct: 1455 ETVKNTWKTKFPDFQIGGKLASKIKLQTSRAKNLEVAYAYG 1495
>Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical
protein ZK643.6 protein.
Length = 180
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 325 KFYDSLRDECPPEIVRCP 378
+FYD L ++CP RCP
Sbjct: 69 EFYDKLSEQCPSTCNRCP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,912,566
Number of Sequences: 27780
Number of extensions: 299177
Number of successful extensions: 737
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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