Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00697
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.84 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 120 LTFSVTSNKMNEEDQ-HMPPAKKPKVD 197
           L  SV+S K + +D    PP +KP+ D
Sbjct: 242 LDLSVSSRKRSNDDSVSQPPNRKPRTD 268


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 508 FLSHYVCLLFRFRSALKALRKIFI*HFLYFIF 413
           F    +C+ ++F +A+ ALR  F+ +   FI+
Sbjct: 467 FYDAMICVAYKFDAAMMALRTSFLVNDFGFIW 498


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 591 RHAAVVSDHHPIQRKHF 541
           R+  VVS  HP Q +H+
Sbjct: 14  RNGGVVSAEHPHQHQHY 30


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 733 VFLPPLSTFCTQDTGWR 683
           +F+ P    CT DT WR
Sbjct: 244 MFVMPTVRNCTGDTSWR 260


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 591 RHAAVVSDHHPIQRKHF 541
           R+  VVS  HP Q +H+
Sbjct: 14  RNGGVVSAEHPHQHQHY 30


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 133  SRAIK*MRKISICHQRRSQRWTI 201
            +RA   +    ICH  ++Q WT+
Sbjct: 1671 TRAAGFLAYYEICHNIKTQGWTV 1693


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 419 HLRAHLLIFPQWTLYPHHYYLL 354
           H++  L+ F + +LY  +YY++
Sbjct: 62  HIKIVLMFFKEASLYCFNYYVI 83


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 631 KPYFLGKGNIRRHDIPISAIP 693
           +P F+ KGN    D+P + +P
Sbjct: 16  EPAFMPKGNKEVFDVPNNFLP 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,615
Number of Sequences: 336
Number of extensions: 3899
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)