Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00697
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456356-1|CAG30242.1| 773|Homo sapiens Em:AC006547.4 protein. 94 5e-19
BC078147-1|AAH78147.1| 740|Homo sapiens DGCR8 protein protein. 94 5e-19
BC009323-1|AAH09323.2| 517|Homo sapiens DGCR8 protein protein. 94 5e-19
AB050770-1|BAB83032.1| 773|Homo sapiens DGCR8 protein protein. 94 5e-19
AK222796-1|BAD96516.1| 570|Homo sapiens DiGeorge syndrome criti... 91 3e-18
AK025539-1|BAB15165.1| 490|Homo sapiens protein ( Homo sapiens ... 91 3e-18
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 38 0.050
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 34 0.62
BT007092-1|AAP35755.1| 57|Homo sapiens erythroid differentiati... 33 1.1
BC007528-1|AAH07528.1| 57|Homo sapiens SLMO1 protein protein. 33 1.1
X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphat... 31 4.4
L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphat... 31 4.4
BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein. 31 4.4
BC106715-1|AAI06716.1| 1505|Homo sapiens PTPRD protein protein. 31 4.4
BC106714-1|AAI06715.1| 1506|Homo sapiens PTPRD protein protein. 31 4.4
BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein. 31 4.4
AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine phosph... 31 4.4
AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine phosph... 31 4.4
AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine phosph... 31 4.4
AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine phosph... 31 4.4
AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine phosph... 31 4.4
AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine phosph... 31 4.4
AB208869-1|BAD92106.1| 1478|Homo sapiens protein tyrosine phosph... 31 4.4
>CR456356-1|CAG30242.1| 773|Homo sapiens Em:AC006547.4 protein.
Length = 773
Score = 93.9 bits (223), Expect = 5e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
VL+ +G E LP W+M H SG+PVY+HR +RV T S+PYFLG G+IR+HD P+S+I
Sbjct: 291 VLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSI 350
Query: 691 PCLAYRKYLEEEEKQK 738
PCL Y+K + EE+++
Sbjct: 351 PCLHYKKMKDNEEREQ 366
>BC078147-1|AAH78147.1| 740|Homo sapiens DGCR8 protein protein.
Length = 740
Score = 93.9 bits (223), Expect = 5e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
VL+ +G E LP W+M H SG+PVY+HR +RV T S+PYFLG G+IR+HD P+S+I
Sbjct: 291 VLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSI 350
Query: 691 PCLAYRKYLEEEEKQK 738
PCL Y+K + EE+++
Sbjct: 351 PCLHYKKMKDNEEREQ 366
>BC009323-1|AAH09323.2| 517|Homo sapiens DGCR8 protein protein.
Length = 517
Score = 93.9 bits (223), Expect = 5e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
VL+ +G E LP W+M H SG+PVY+HR +RV T S+PYFLG G+IR+HD P+S+I
Sbjct: 35 VLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSI 94
Query: 691 PCLAYRKYLEEEEKQK 738
PCL Y+K + EE+++
Sbjct: 95 PCLHYKKMKDNEEREQ 110
>AB050770-1|BAB83032.1| 773|Homo sapiens DGCR8 protein protein.
Length = 773
Score = 93.9 bits (223), Expect = 5e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
VL+ +G E LP W+M H SG+PVY+HR +RV T S+PYFLG G+IR+HD P+S+I
Sbjct: 291 VLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSI 350
Query: 691 PCLAYRKYLEEEEKQK 738
PCL Y+K + EE+++
Sbjct: 351 PCLHYKKMKDNEEREQ 366
>AK222796-1|BAD96516.1| 570|Homo sapiens DiGeorge syndrome critical
region gene 8 variant protein.
Length = 570
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/76 (51%), Positives = 56/76 (73%)
Frame = +1
Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
VL+ +G E LP W+M H SG+PVY+HR +RV T S+PYFLG G+IR++D P+S+I
Sbjct: 88 VLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKYDPPLSSI 147
Query: 691 PCLAYRKYLEEEEKQK 738
PCL Y+K + EE+++
Sbjct: 148 PCLHYKKMKDNEEREQ 163
>AK025539-1|BAB15165.1| 490|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21886 fis, clone HEP03022. ).
Length = 490
Score = 91.5 bits (217), Expect = 3e-18
Identities = 39/76 (51%), Positives = 56/76 (73%)
Frame = +1
Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
VL+ +G E LP W+M H SG+PVY+HR +RV T S+PYFLG G+IR++D P+S+I
Sbjct: 8 VLKSRGRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKYDPPLSSI 67
Query: 691 PCLAYRKYLEEEEKQK 738
PCL Y+K + EE+++
Sbjct: 68 PCLHYKKMKDNEEREQ 83
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 37.5 bits (83), Expect = 0.050
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 661 GCSLSRGSKAWRACRPWWSGACRPACRCSV 572
GC + WR CRPWW+ C CR V
Sbjct: 81 GCRSTAACSRWRGCRPWWASVC-TGCRSCV 109
>U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.62
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 670 RAAGCSLSRGSKAWRACRPWWSGACRPACRCSVGPSSNPAEA 545
R GC+ S + AC P++S A PA R S+ P S A A
Sbjct: 13 RGCGCNCSSCRRTGAACLPFYSAASYPALRASLLPQSLAAAA 54
>BT007092-1|AAP35755.1| 57|Homo sapiens erythroid differentiation
and denucleation factor 1 protein.
Length = 57
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -2
Query: 613 WWSGACRPACRCSVGPSSNP----AEALRSGWRPCL 518
W G RP + PSS P + LR GWRPCL
Sbjct: 6 WGPGVSRPFLQAVPAPSSLPLPCPGDILRPGWRPCL 41
>BC007528-1|AAH07528.1| 57|Homo sapiens SLMO1 protein protein.
Length = 57
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -2
Query: 613 WWSGACRPACRCSVGPSSNP----AEALRSGWRPCL 518
W G RP + PSS P + LR GWRPCL
Sbjct: 6 WGPGVSRPFLQAVPAPSSLPLPCPGDILRPGWRPCL 41
>X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 1523
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 788 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 824
>L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphatase
delta protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein.
Length = 1496
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 761 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 797
>BC106715-1|AAI06716.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 766 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 802
>BC106714-1|AAI06715.1| 1506|Homo sapiens PTPRD protein protein.
Length = 1506
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 766 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 802
>BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 756 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 792
>AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine phosphatase
receptor type D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 1177 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 1213
>AB208869-1|BAD92106.1| 1478|Homo sapiens protein tyrosine
phosphatase, receptor type, D isoform 4 precursor
variant protein.
Length = 1478
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 481 REGIRNGKEIVLEDKGANHFEVLPLDWMM--VRHYSG 585
R IR G+E+ L+ A HF+VLP ++ + +HY G
Sbjct: 739 RRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGG 775
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,298,286
Number of Sequences: 237096
Number of extensions: 2289997
Number of successful extensions: 5367
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5363
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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