Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00697
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058524-1|AAL13753.1|  642|Drosophila melanogaster LD23072p pro...   109   5e-24
AE014297-4774|AAF57175.1|  642|Drosophila melanogaster CG1800-PA...   109   5e-24
U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase pitch...    29   8.8  
AY119620-1|AAM50274.1|  680|Drosophila melanogaster LD46167p pro...    29   8.8  
AY071402-1|AAL49024.1|  680|Drosophila melanogaster RE48840p pro...    29   8.8  
AE014297-3091|AAN13900.2|  680|Drosophila melanogaster CG6375-PB...    29   8.8  
AE014297-3090|AAF55951.2|  680|Drosophila melanogaster CG6375-PA...    29   8.8  

>AY058524-1|AAL13753.1|  642|Drosophila melanogaster LD23072p
           protein.
          Length = 642

 Score =  109 bits (261), Expect = 5e-24
 Identities = 45/77 (58%), Positives = 59/77 (76%)
 Frame = +1

Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
           VLE+K  NHFEVLP  W+ V H SGMP+++HR TRVC  S+PYFLG G+ R+H +P+ AI
Sbjct: 143 VLEEKRLNHFEVLPEGWVQVTHNSGMPLFLHRKTRVCCASRPYFLGTGSARKHAVPLGAI 202

Query: 691 PCLAYRKYLEEEEKQKE 741
           PCL YR+ LEEE + ++
Sbjct: 203 PCLNYRRALEEESEVEQ 219



 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 413 EDEIEKMLDEDLPEGFKGAPKPK 481
           +DEIE +LDE LPE  + + +PK
Sbjct: 113 DDEIENLLDEKLPEELRESKQPK 135


>AE014297-4774|AAF57175.1|  642|Drosophila melanogaster CG1800-PA
           protein.
          Length = 642

 Score =  109 bits (261), Expect = 5e-24
 Identities = 45/77 (58%), Positives = 59/77 (76%)
 Frame = +1

Query: 511 VLEDKGANHFEVLPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAI 690
           VLE+K  NHFEVLP  W+ V H SGMP+++HR TRVC  S+PYFLG G+ R+H +P+ AI
Sbjct: 143 VLEEKRLNHFEVLPEGWVQVTHNSGMPLFLHRKTRVCCASRPYFLGTGSARKHAVPLGAI 202

Query: 691 PCLAYRKYLEEEEKQKE 741
           PCL YR+ LEEE + ++
Sbjct: 203 PCLNYRRALEEESEVEQ 219



 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 413 EDEIEKMLDEDLPEGFKGAPKPK 481
           +DEIE +LDE LPE  + + +PK
Sbjct: 113 DDEIENLLDEKLPEELRESKQPK 135


>U84552-1|AAC27683.1|  663|Drosophila melanogaster helicase
           pitchoune protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 395 KSEGVPEDEIEKMLDEDLPEGFKGAPKPKEK 487
           K E + +  + K  D+DL E F+ AP PK+K
Sbjct: 30  KPEKLSKKHVAKDEDDDLEEDFQEAPLPKKK 60


>AY119620-1|AAM50274.1|  680|Drosophila melanogaster LD46167p
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 395 KSEGVPEDEIEKMLDEDLPEGFKGAPKPKEK 487
           K E + +  + K  D+DL E F+ AP PK+K
Sbjct: 47  KPEKLSKKHVAKDEDDDLEEDFQEAPLPKKK 77


>AY071402-1|AAL49024.1|  680|Drosophila melanogaster RE48840p
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 395 KSEGVPEDEIEKMLDEDLPEGFKGAPKPKEK 487
           K E + +  + K  D+DL E F+ AP PK+K
Sbjct: 47  KPEKLSKKHVAKDEDDDLEEDFQEAPLPKKK 77


>AE014297-3091|AAN13900.2|  680|Drosophila melanogaster CG6375-PB,
           isoform B protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 395 KSEGVPEDEIEKMLDEDLPEGFKGAPKPKEK 487
           K E + +  + K  D+DL E F+ AP PK+K
Sbjct: 47  KPEKLSKKHVAKDEDDDLEEDFQEAPLPKKK 77


>AE014297-3090|AAF55951.2|  680|Drosophila melanogaster CG6375-PA,
           isoform A protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 395 KSEGVPEDEIEKMLDEDLPEGFKGAPKPKEK 487
           K E + +  + K  D+DL E F+ AP PK+K
Sbjct: 47  KPEKLSKKHVAKDEDDDLEEDFQEAPLPKKK 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,629,954
Number of Sequences: 53049
Number of extensions: 681606
Number of successful extensions: 2100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)