Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00697
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical pr...    73   3e-13
AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...    29   4.6  

>Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical
           protein T22A3.5 protein.
          Length = 790

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 547 LPLDWMMVRHYSGMPVYMHRSTRVCTLSKPYFLGKGNIRRHDIPISAIPCLAYRKYLEEE 726
           LP  W ++ H SGMPVY H+ TRV T SKPY L +G +R H+IP+S+IPCL Y+K ++E 
Sbjct: 176 LPEGWTVISHQSGMPVYYHKFTRVVTHSKPY-LVEGIVRDHEIPVSSIPCL-YKKIMDEL 233

Query: 727 EKQKE 741
            +  E
Sbjct: 234 HENVE 238


>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -3

Query: 678 GNIVPPDVPFPEEVRLGERADPGGAVHVDRHAAVVSDHHPIQ 553
           G+I   D+  P +V+L  +   GG+VH + +  V+    PI+
Sbjct: 332 GDIRQYDISDPLKVKLNSQVYIGGSVHTESNVKVLEGEKPIE 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,728,399
Number of Sequences: 27780
Number of extensions: 353543
Number of successful extensions: 1220
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)