Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00695
         (749 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)        132   2e-31
SB_31371| Best HMM Match : Peptidase_M24 (HMM E-Value=0)               52   5e-07
SB_34323| Best HMM Match : F5_F8_type_C (HMM E-Value=0.0014)           30   2.3  
SB_21019| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_42738| Best HMM Match : 7tm_1 (HMM E-Value=0.89)                    29   4.0  
SB_35344| Best HMM Match : PRP1_N (HMM E-Value=0)                      28   9.3  
SB_11397| Best HMM Match : ECSIT (HMM E-Value=1.7e-24)                 28   9.3  

>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
          Length = 708

 Score =  132 bits (320), Expect = 2e-31
 Identities = 56/74 (75%), Positives = 63/74 (85%)
 Frame = +3

Query: 528 GLAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDP 707
           GLAFPTGCS NHCAAHYTPN GD TVL YDDV KIDFGTHINGRI+DCAFT+ FNP+YD 
Sbjct: 107 GLAFPTGCSLNHCAAHYTPNAGDKTVLSYDDVCKIDFGTHINGRIVDCAFTVAFNPKYDN 166

Query: 708 LVKGVQEATEAGIK 749
           L+  V++AT  GI+
Sbjct: 167 LLAAVKDATNTGIR 180



 Score =  130 bits (314), Expect = 1e-30
 Identities = 55/73 (75%), Positives = 62/73 (84%)
 Frame = +3

Query: 531 LAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHFNPRYDPL 710
           LAFPTGCS NHCAAHYTPN GD TVL YDDV KIDFGTHINGRI+DCAFT+ FNP+YD L
Sbjct: 2   LAFPTGCSLNHCAAHYTPNAGDKTVLSYDDVCKIDFGTHINGRIVDCAFTVAFNPKYDNL 61

Query: 711 VKGVQEATEAGIK 749
           +  V++AT  GI+
Sbjct: 62  LAAVKDATNTGIR 74


>SB_31371| Best HMM Match : Peptidase_M24 (HMM E-Value=0)
          Length = 465

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +3

Query: 510 EDGLKAGLAFPTGCSRNHCAAHYTPNTGDTTV-LEYDDVVKIDFGTHINGRIIDCAFTL 683
           E  LK G+AFPT  S N+C  H++P   +  + L   D+VKIDFG HI+G I     T+
Sbjct: 71  EKELKKGIAFPTCISVNNCVCHFSPLLSEPDITLNDGDLVKIDFGVHIDGFIAVIGHTI 129


>SB_34323| Best HMM Match : F5_F8_type_C (HMM E-Value=0.0014)
          Length = 221

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 217 RPTYYTSSGTISCGNFPEGQIMDHG--PAEGIDERTAKNRF 333
           RP Y   S  + CGN+P    M+ G  P E I   + K+RF
Sbjct: 99  RPGYNYCSFMVRCGNYPHPLGMEDGTLPDENITASSEKDRF 139


>SB_21019| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 135

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -3

Query: 480 LFTNIYHCHARLDPIADVFSCLPVGFSSMSDLLINIFM*SIKSSFL 343
           +FTN Y CH  L  I D FSC     S+ S   + IF+ S K  ++
Sbjct: 77  IFTNCYDCHDSL-KILDPFSC-SSALSTKSPAFLAIFIASEKLFYI 120


>SB_42738| Best HMM Match : 7tm_1 (HMM E-Value=0.89)
          Length = 1354

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 426  THPQLDQAWHDNDRYL*RVREDCETSYWEDGLKAG-LAFPTGCSRNHCAAHYTPNT 590
            THP+ D   H    +L + R  C TS+  D   A  L +P    R+HCA    P T
Sbjct: 1009 THPRRD---HCVLPHLPQTRPLCTTSFTPDATTAHYLTYPRRDQRDHCALPRLPKT 1061


>SB_35344| Best HMM Match : PRP1_N (HMM E-Value=0)
          Length = 437

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 271 GQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKHIR 435
           G +   GP +  DE  A + + S +KR  DR  +   Q+++   E +RQ R  I+
Sbjct: 73  GSLFSSGPYDKDDEE-ADSIYESIDKRMDDRRKERREQKLKEEMERYRQERPKIQ 126


>SB_11397| Best HMM Match : ECSIT (HMM E-Value=1.7e-24)
          Length = 316

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 436 NWIKPGMTMIDICEELEKTARRLIGKMGSKQVWLS 540
           N IKP +   DICEE+   A + + K+     WL+
Sbjct: 213 NVIKPSIETYDICEEIFGKASQPVQKVRRLAYWLT 247


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,475,306
Number of Sequences: 59808
Number of extensions: 388560
Number of successful extensions: 1139
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)