Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00695
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.3  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    24   5.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.8  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 680 CEGAVNNATIYVSTKVDLHYIIIFENC 600
           C+  +N A IYV  K  +  I ++ENC
Sbjct: 680 CDVWINIAHIYVEQKQYISAIQMYENC 706


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = -1

Query: 599 CITCVRSIMCRTVVAAASCGESQTCFEP 516
           C TCV    C +    A CG    C  P
Sbjct: 3   CKTCVADCKCTSPNCGAGCGCESRCTCP 30


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 208 GADRPTYYTSSGTISCGNFPE 270
           G D   YYTS+   S GN P+
Sbjct: 333 GTDGSQYYTSAADPSMGNDPQ 353


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,520
Number of Sequences: 2352
Number of extensions: 13588
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)