Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00695
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...   140   1e-33
AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical ...    51   8e-07
Z47357-5|CAA87424.1|  446|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z81029-3|CAB02699.2|  207|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U88170-4|AAB42245.2|  425|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score =  140 bits (339), Expect = 1e-33
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = +3

Query: 510 EDGLKAGLAFPTGCSRNHCAAHYTPNTGDTTVLEYDDVVKIDFGTHINGRIIDCAFTLHF 689
           E GL+AGLAFPTGCS NHCAAHYTPN GDTTVL+Y DV KID+G H+ GR+ID AFT+HF
Sbjct: 174 EQGLEAGLAFPTGCSLNHCAAHYTPNAGDTTVLQYGDVCKIDYGIHVRGRLIDSAFTVHF 233

Query: 690 NPRYDPLVKGVQEATEAGIK 749
           +P++DPLV+ V+EAT AGIK
Sbjct: 234 DPKFDPLVEAVREATNAGIK 253



 Score =  100 bits (239), Expect = 1e-21
 Identities = 47/90 (52%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
 Frame = +1

Query: 256 GNFPEGQIMDHGP--AEGIDERTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKH 429
           G FP G  +D  P   +G D R A +R ++EEK+ALD  +++++Q+ R +AEAHRQ RK+
Sbjct: 89  GKFPHG--IDESPYYLKGKDGRVATDRESNEEKKALDISYEEVWQDYRRSAEAHRQVRKY 146

Query: 430 IRNWIKPGMTMIDICEELEKTARRLIGKMG 519
           +++WIKPGMTMI+ICE LE T+RRLI + G
Sbjct: 147 VKSWIKPGMTMIEICERLETTSRRLIKEQG 176


>AC006696-3|AAF39984.1|  391|Caenorhabditis elegans Hypothetical
           protein W08E12.7 protein.
          Length = 391

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +3

Query: 510 EDGLKAGLAFPTGCSRNHCAAHYTPNTGDT-TVLEYDDVVKIDFGTHINGRIIDCAFTLH 686
           E     G+A PT  S ++C  HYTP   +   VL+   VVK+D GTHI+G I   A T+ 
Sbjct: 78  EKNFTKGIAMPTCISIDNCICHYTPLKSEAPVVLKNGQVVKVDLGTHIDGLIATAAHTVV 137

Query: 687 FNPRYDPLVKG 719
                D  V G
Sbjct: 138 VGASKDNKVTG 148


>Z47357-5|CAA87424.1|  446|Caenorhabditis elegans Hypothetical
           protein ZK1128.5 protein.
          Length = 446

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +1

Query: 268 EGQIMD--HGPAEGIDERTA-KNRFTSEEKRALDRLHKDIYQEIRHAAEAHR 414
           EG+++D    P  G + R A K +F+S  K  +  L KDIY    H  E HR
Sbjct: 139 EGRLLDDMQHPTVGANPRPAPKRKFSSFFKSLVIELDKDIYGPDNHLVEWHR 190


>Z81029-3|CAB02699.2|  207|Caenorhabditis elegans Hypothetical
           protein C01A2.4 protein.
          Length = 207

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 325 NRFTSEEKRALDRLHKDIYQEIRH-AAEAHRQTRKHI 432
           NR    ++R +DR  K++ QEI+  AA+ H    +H+
Sbjct: 24  NRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARHL 60


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 328 RFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIK 447
           + + + K+ L +LH D YQ ++   E   +TR   +N+ K
Sbjct: 277 KLSFKRKKLLVKLHPDSYQYLKETVEFSFETRDECKNFWK 316


>U88170-4|AAB42245.2|  425|Caenorhabditis elegans Hypothetical
           protein C10G11.6 protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
 Frame = +1

Query: 262 FPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRK----- 426
           FP    +D    EG+   +  + FT+E  R+ D +  DI +  R      R         
Sbjct: 34  FPMKYQLDEDDEEGL-VHSPHSSFTTENLRSSDPMFFDINRWKREVGTVIRSENHVLIHN 92

Query: 427 --HIRNWIKPGMTMIDICEELEKTARRLIGKMGSKQV 531
              IRN I   M +    E L++  +RLI  +  ++V
Sbjct: 93  DDEIRNAISKAMLLDSASEHLQRKRKRLIDILDEQRV 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,349,674
Number of Sequences: 27780
Number of extensions: 293696
Number of successful extensions: 853
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)