Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00693
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 135 6e-33
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 69 6e-13
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 64 3e-11
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 58 2e-09
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 52 1e-07
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 43 6e-05
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 35 0.015
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 33 0.046
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 32 0.080
SPCC550.02c |cwf5|ecm2|RNA-binding protein Cwf5|Schizosaccharomy... 27 2.3
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 27 3.0
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 3.0
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 4.0
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 4.0
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 4.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 26 5.3
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 7.0
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 9.2
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.2
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 135 bits (327), Expect = 6e-33
Identities = 64/74 (86%), Positives = 68/74 (91%)
Frame = +3
Query: 9 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 188
EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTIDF
Sbjct: 9 EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFT 68
Query: 189 EFLTMMARKMKDTD 230
EFLTMMARKMKDTD
Sbjct: 69 EFLTMMARKMKDTD 82
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +2
Query: 257 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 433
+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +MIREAD DGDG +NYEEF +++SK
Sbjct: 92 KVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150
Score = 69.7 bits (163), Expect = 4e-13
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +3
Query: 21 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 200
E +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG+G I++ EF
Sbjct: 86 EVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSR 145
Query: 201 MMARK 215
+++ K
Sbjct: 146 VISSK 150
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 260 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 433
+FD+D +G I++ EL VM +LG+ T E+ +MI E D DG+G +++ EF+TMM K
Sbjct: 20 LFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARK 77
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 266 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTS 430
D DGNG I E +T + K+ D + +E +REA D DG+G + EE ++TS
Sbjct: 58 DADGNGTIDFTEF---LTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTS 113
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 69.3 bits (162), Expect = 6e-13
Identities = 30/59 (50%), Positives = 44/59 (74%)
Frame = +2
Query: 248 RGLRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 424
+G +VFDKD G I ELR+V+T+LGEKL++EE+DE+++ + DG VNY +FV M+
Sbjct: 81 KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMI 138
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +3
Query: 24 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 203
+K+AFSLFD+ G G I +G ++R+ GQNPT AE I E+++ +D +FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQV 63
Query: 204 MAR 212
+ R
Sbjct: 64 LNR 66
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 21 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 200
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V +G +++ +F+
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQ 136
Query: 201 MM 206
M+
Sbjct: 137 MI 138
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 63.7 bits (148), Expect = 3e-11
Identities = 32/76 (42%), Positives = 50/76 (65%)
Frame = +3
Query: 3 AREQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 182
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+ ID
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAID 59
Query: 183 FPEFLTMMARKMKDTD 230
+F++ ++ K+++T+
Sbjct: 60 EKKFMSFVSNKLRETE 75
Score = 59.7 bits (138), Expect = 5e-10
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2
Query: 248 RGLRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 427
+ RVFDKD +G+I A+ M LGEKL+D EV M++EAD G +Y +FV +
Sbjct: 82 KAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQRIM 141
Query: 428 SK 433
+K
Sbjct: 142 AK 143
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 9 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 188
E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D +G+ D+
Sbjct: 75 ESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYY 134
Query: 189 EFLTMMARK 215
+F+ + K
Sbjct: 135 DFVQRIMAK 143
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 57.6 bits (133), Expect = 2e-09
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 248 RGLRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 424
R +FD D G IS LR V L E + D+E++ MI E D+D DG++N +EF+ +M
Sbjct: 114 RAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIM 172
Score = 55.2 bits (127), Expect = 1e-08
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = +3
Query: 9 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 188
EQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G +
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 189 EFLTMMARKMKDTD 230
+F+ +M K+ + D
Sbjct: 94 DFVRVMTEKIVERD 107
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 257 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 433
++FD D + I ELR M LG EV +++R+ D G G + E+FV +MT K
Sbjct: 44 KLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEK 102
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 LRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDGQVN 400
LR FDK G G++ + VMT + E+ EE+ D D G+++
Sbjct: 79 LRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKIS 128
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 51.6 bits (118), Expect = 1e-07
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 12 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 191
QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E D IN + N I+
Sbjct: 46 QIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPPINLAA 101
Query: 192 FLTMM 206
FLT M
Sbjct: 102 FLTAM 106
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +2
Query: 260 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 430
+ DKDG+G I +++ ++T+L + +++ ++ M + +N F+T M S
Sbjct: 56 LLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI----NPPINLAAFLTAMGS 108
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 287 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTS 430
++A + + +LT ++ E+ +EA D DGDG + E+ TM+TS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTS 76
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +3
Query: 30 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 167
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 42.7 bits (96), Expect = 6e-05
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +2
Query: 257 RVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 412
+++D D +G+IS EL V+ TNL E + VD+ I E D D DG++++EEF
Sbjct: 100 KIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEF 156
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 3 AREQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 182
+ E+I ++ F D + G+I E ++ S+ NP + L + VD DG G +D
Sbjct: 19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVD 74
Query: 183 FPEFLTMMA 209
F EF+ ++
Sbjct: 75 FQEFINSLS 83
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 34.7 bits (76), Expect = 0.015
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 9 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 188
E E +EAF LFD G I ++L LG+N T+ +LQ M++ A NG +
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSRE 66
Query: 189 EF 194
EF
Sbjct: 67 EF 68
Score = 34.3 bits (75), Expect = 0.020
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-DGQVNYEEFVTM 421
+FD G+I +LR LGE LT E++ M+ D+ G +G+V+ EEF +
Sbjct: 20 LFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLAGTNGKVSREEFAEL 71
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 33.1 bits (72), Expect = 0.046
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +2
Query: 278 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 424
NG++S ++ V+ + KL+ ++++++ ADID DG +++EF M
Sbjct: 20 NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFDFDEFAIAM 66
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 32.3 bits (70), Expect = 0.080
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 266 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 415
D DG G++ + +K + +EV E IRE ++D G+V E+FV
Sbjct: 29 DVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVNVDSSGRVEPEDFV 77
>SPCC550.02c |cwf5|ecm2|RNA-binding protein Cwf5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 354
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 542 RKH*RNAGPIRSNIVCHETKCIF 474
RKH GP++S + H KC F
Sbjct: 229 RKHFEQYGPLKSVVCSHRAKCAF 251
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 141 MINEVDADGNGTIDFPEFLTMMA 209
+ N DAD NG IDF EF+ ++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALS 90
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 311 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 409
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 263 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 376
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 138 LEVRLLWGSVLATSSRCPALWS*WCHR 58
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 263 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 376
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 300 SAAEMKPLPS--LSKTRRPRGFLPRYPCPSSCAPSLSRTRESL 178
S A P PS L P P P PSS APS+S R S+
Sbjct: 1214 STAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSV 1256
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 18 AEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 155
A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 546 ATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 400 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 299
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 30 EAFSLFDKDGDGTITTKELGTVMR 101
+ F FD+D DG + +EL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 478 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAV 380
YLNSLL H G L++ H + LAVA+
Sbjct: 299 YLNSLLSVHEKDGVLLQKFHNSYVQYQKLAVAL 331
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,500,110
Number of Sequences: 5004
Number of extensions: 42669
Number of successful extensions: 179
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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