Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00692
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic in... 58 8e-09
Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical p... 29 4.5
AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin ... 29 4.5
AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like ... 29 4.5
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 28 5.9
AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical... 28 7.8
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 28 7.8
AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical... 28 7.8
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 28 7.8
>AF067608-8|AAC17647.1| 432|Caenorhabditis elegans Eukaryotic
initiation factor protein3.E protein.
Length = 432
Score = 57.6 bits (133), Expect = 8e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1
Query: 79 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTD 243
S FDLT ++ +LD HL+ PLLEF+ + YD+ L + ++L+KTNMID V +
Sbjct: 2 STFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIE 56
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/87 (24%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 258 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPK---TLINHL 428
Y + P I ++ ++ E EL+ V+ V+ +++ +V + ++ R+ ++ HL
Sbjct: 58 YNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEHL 117
Query: 429 STNKEYEFKIEMIDSMYRLAKYRYECG 509
+ N + F ++M+D++++ +K+ YECG
Sbjct: 118 TQN--HNFTVDMVDTLFKYSKFMYECG 142
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 509 NYVESASYLYFCQLVMSPTDKNYLSVLWGKLASEILVQ 622
NY ++ LY+ + +++ D NYL+ L+GKLASEIL+Q
Sbjct: 143 NYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQ 180
>Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical
protein T16H12.2 protein.
Length = 181
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 255 LYPEEDTPEEIIQRRGVVLSELQELQDAVEP 347
LYP++DTP +I++ R L Q+ +D EP
Sbjct: 130 LYPKKDTPPKILRARRRSLIRAQKKKDFQEP 160
>Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 HQKNLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQR-DDVMKTIETMRDPKTLI 419
H+K + +++ E I+ + +Q L+D + + Q DD KT++ D K
Sbjct: 711 HEKQVIADQNNQETILDTLNTAETVVQSLEDNIVETCDVKQEMDDTKKTLK-QTDAKQ-E 768
Query: 420 NHLSTNKE 443
NH+ KE
Sbjct: 769 NHIQVEKE 776
>Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 HQKNLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQR-DDVMKTIETMRDPKTLI 419
H+K + +++ E I+ + +Q L+D + + Q DD KT++ D K
Sbjct: 711 HEKQVIADQNNQETILDTLNTAETVVQSLEDNIVETCDVKQEMDDTKKTLK-QTDAKQ-E 768
Query: 420 NHLSTNKE 443
NH+ KE
Sbjct: 769 NHIQVEKE 776
>AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin
BMK-1 protein.
Length = 958
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 HQKNLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQR-DDVMKTIETMRDPKTLI 419
H+K + +++ E I+ + +Q L+D + + Q DD KT++ D K
Sbjct: 711 HEKQVIADQNNQETILDTLNTAETVVQSLEDNIVETCDVKQEMDDTKKTLK-QTDAKQ-E 768
Query: 420 NHLSTNKE 443
NH+ KE
Sbjct: 769 NHIQVEKE 776
>AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like
protein KLP-14 protein.
Length = 958
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 243 HQKNLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQR-DDVMKTIETMRDPKTLI 419
H+K + +++ E I+ + +Q L+D + + Q DD KT++ D K
Sbjct: 711 HEKQVIADQNNQETILDTLNTAETVVQSLEDNIVETCDVKQEMDDTKKTLK-QTDAKQ-E 768
Query: 420 NHLSTNKE 443
NH+ KE
Sbjct: 769 NHIQVEKE 776
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = -2
Query: 470 IDHFNFKLILLVCRKMVYKSFRIPHGFNCFHYIISLHESQYWLYCILKFLQFRKNYTSPL 291
++H + K I C + V ++ H F +++++ + S+Y + I+ LQ+ TS
Sbjct: 2727 VEHHDLKRIKSACVQSVRRAVAFSHAFRVWNWLLRMVSSEYSVSDII--LQYLTTLTS-- 2782
Query: 290 YNFFRSVFF 264
YN F
Sbjct: 2783 YNRLAEYMF 2791
>AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical
protein Y73C8C.10 protein.
Length = 400
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 453 KIEMIDSMYRLAKYRYECGIMWSQHH 530
K E++D AKY YECG Q H
Sbjct: 171 KTEVVDRFVYAAKYAYECGFDGIQLH 196
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 306 VLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIEMIDSMYRL 485
+++ L L+ E + L + + KT++T+ K L+N + TN ++E + S
Sbjct: 358 IIAPLTYLESIKEVEILLQAIESLKKTVDTLVGTKELVNWVKTNDVVLKEVEALCSYTDE 417
Query: 486 AKYRYECGI 512
K +E +
Sbjct: 418 EKKDFESSV 426
>AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32b protein.
Length = 216
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 626 QFVPKFR*PIYPKEPTNNSCQLATSPVD 543
+ V +FR P Y +PT+NS L P+D
Sbjct: 45 EHVGQFRRPRYSADPTSNSTDLQLRPLD 72
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 626 QFVPKFR*PIYPKEPTNNSCQLATSPVD 543
+ V +FR P Y +PT+NS L P+D
Sbjct: 213 EHVGQFRRPRYSADPTSNSTDLQLRPLD 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,925,779
Number of Sequences: 27780
Number of extensions: 320446
Number of successful extensions: 952
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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