Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00692
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.8  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.0  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = +1

Query: 112 YLDRH-----LVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRISI 261
           Y+ RH     L   ++ F A   TY  SEL++   E+ ++ + +    +  RI I
Sbjct: 265 YMSRHENVSILYADIVGFTAISSTYSASELVKILNELFARFDQLSERFEQLRIKI 319


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 47  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 187
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 348 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 395


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 47  IHENKLS-T*VTQNLI*RLK*DSILIGISCFLY*NS*QQRRHMTSQSS 187
           +HE +   T + QN+I  +K D +L     +LY N+       T  S+
Sbjct: 386 VHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSA 433


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 527 MLTPHNSTFIAIFGQTIHAID 465
           +LTP ++   A+F +T+  ID
Sbjct: 312 LLTPVSTMLPAVFAKTVSCID 332


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 417 INHLSTNKEYEFKI 458
           +NHL T+ EY++++
Sbjct: 761 VNHLLTHHEYDYEL 774


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 527 MLTPHNSTFIAIFGQTIHAID 465
           +LTP ++   A+F +T+  ID
Sbjct: 312 LLTPVSTMLPAVFAKTVSCID 332


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 449 LILLVCRKMVYKS 411
           LIL+ CRK V KS
Sbjct: 59  LILITCRKRVSKS 71


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 652 KLREFIDNGGAVPLPATCKP 711
           KL E    GG++P P T  P
Sbjct: 145 KLVESFPRGGSLPTPVTPTP 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,234
Number of Sequences: 438
Number of extensions: 4417
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)