Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00691
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 164 LVYQPSVDRDLHEVVHTEV 108
           LVY+PS  R  HE+  T+V
Sbjct: 515 LVYEPSACRPRHEIRSTDV 533


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -1

Query: 149 SVDRDLHEVVHTEVGYWGVRIQQVLICVVVWLRGG 45
           S+DR +H       G W  R   V    VVWL  G
Sbjct: 120 SLDRYIHIKDPLRYGRWVTRRIAVAGIAVVWLLAG 154


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 182 LLPSNRLVYQPSVDRDLHEVVHTEV 108
           +LP+  LV+ P    D  + VH +V
Sbjct: 54  VLPNGNLVFPPFRAEDYRQEVHAQV 78


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 317 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRP 430
           T TLP  S T      PSA   + +     + G +T P
Sbjct: 225 TTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIP 262


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 167 DYWGEGKVTNLDKIRGFPRSYNV 235
           D WG+     + K  G P S NV
Sbjct: 68  DQWGDKTFVIIMKFNGVPSSLNV 90


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/54 (24%), Positives = 23/54 (42%)
 Frame = +2

Query: 146 QRAGTQVDYWGEGKVTNLDKIRGFPRSYNVNEQFALAVRATTRESKYPTGSPSC 307
           Q A   ++ +  GK+   ++ R   R Y+      LA+ +T+       G P C
Sbjct: 543 QAALRSIENYYSGKLERTEEQRIALRKYHAPRLAKLALESTSMIDVVRYGKPHC 596


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/54 (24%), Positives = 23/54 (42%)
 Frame = +2

Query: 146 QRAGTQVDYWGEGKVTNLDKIRGFPRSYNVNEQFALAVRATTRESKYPTGSPSC 307
           Q A   ++ +  GK+   ++ R   R Y+      LA+ +T+       G P C
Sbjct: 581 QAALRSIENYYSGKLERTEEQRIALRKYHAPRLAKLALESTSMIDVVRYGKPHC 634


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,064
Number of Sequences: 438
Number of extensions: 3897
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)