Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00690
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q10109 Cluster: Uncharacterized protein C18G6.10; n=1; ...    37   0.45 
UniRef50_A4ABW1 Cluster: TonB-dependent receptor; n=1; Congregib...    33   5.5  
UniRef50_A0UJP0 Cluster: Putative uncharacterized protein precur...    33   5.5  
UniRef50_A5E283 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_A1S0Y8 Cluster: Glycosyl transferase, group 1; n=1; The...    33   9.6  

>UniRef50_Q10109 Cluster: Uncharacterized protein C18G6.10; n=1;
           Schizosaccharomyces pombe|Rep: Uncharacterized protein
           C18G6.10 - Schizosaccharomyces pombe (Fission yeast)
          Length = 688

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
 Frame = -3

Query: 218 SSIQNLIRDDKLWFTRIMQQIHRHACLWSGIR--FYDIRFSNYR 93
           S + +   DD+L+   ++QQ  + + LWS I+  F+DI+++NYR
Sbjct: 257 SEVDSAEEDDELFQNYVLQQTRKESKLWSFIKKVFHDIKYANYR 300


>UniRef50_A4ABW1 Cluster: TonB-dependent receptor; n=1;
           Congregibacter litoralis KT71|Rep: TonB-dependent
           receptor - Congregibacter litoralis KT71
          Length = 946

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 528 FRFANNRIIDSLGPGINENVPAGKARPERRTER-RFIYYKGNETLPA 391
           +R   N  ++  GPG N   P+   RP+RRT    F +Y  NE + A
Sbjct: 271 YRTEGNEFLEGRGPGFNFAAPSFFQRPDRRTTMGTFAHYDINENVEA 317


>UniRef50_A0UJP0 Cluster: Putative uncharacterized protein
           precursor; n=1; Burkholderia multivorans ATCC 17616|Rep:
           Putative uncharacterized protein precursor -
           Burkholderia multivorans ATCC 17616
          Length = 1714

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 25/75 (33%), Positives = 35/75 (46%)
 Frame = -2

Query: 549 KLLNRFMFRFANNRIIDSLGPGINENVPAGKARPERRTERRFIYYKGNETLPARLASSRA 370
           ++  R   RF   R   S G   ++   + +ARP RR  R F  Y+    +PA +A   A
Sbjct: 27  RITPRITPRFDAERAPASAGARDDDGRRSVRARPVRRV-RLFARYRRPARIPATVAPLLA 85

Query: 369 PHVGAA*LVITARRR 325
           PH  A  + I  RRR
Sbjct: 86  PHAQAIHVQIDDRRR 100


>UniRef50_A5E283 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 746

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = -3

Query: 332 VGGTYRVSLLLIKIYTPLDLITRNKFNRLYGIHAFERNSSIQNLIRDDKLWFTRIMQQIH 153
           +G T RVS+ L + +TPL +   NK   +  I++ E    + ++   ++  FT I QQ+ 
Sbjct: 135 IGNTTRVSIELHRAFTPLTITFYNKAKNIADINSEELLEFLISIGLANQYHFTDIAQQLL 194

Query: 152 RHACL----WSGIRFYDIRFSNYRNS 87
           + A      +  +  Y +RF  Y  +
Sbjct: 195 KEATTKPENYQKVLQYWVRFREYETT 220


>UniRef50_A1S0Y8 Cluster: Glycosyl transferase, group 1; n=1;
           Thermofilum pendens Hrk 5|Rep: Glycosyl transferase,
           group 1 - Thermofilum pendens (strain Hrk 5)
          Length = 380

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 14/43 (32%), Positives = 28/43 (65%)
 Frame = -3

Query: 305 LLIKIYTPLDLITRNKFNRLYGIHAFERNSSIQNLIRDDKLWF 177
           +L ++YTPL +   N F++L+ ++ F+RN    + I ++K+ F
Sbjct: 130 VLARLYTPLYIAAFNSFDKLHVLNRFQRNFLKSHGIPEEKIEF 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,650,877
Number of Sequences: 1657284
Number of extensions: 12312383
Number of successful extensions: 29925
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29914
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)