Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00689
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.0  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = -2

Query: 712 SALPSLRSTAILEPRHFG*RLQHVV------SVPSRNGHESDSSWVVANLLD 575
           + LP++ ST   +PR     L+ VV        P+RN  E+D    +  L+D
Sbjct: 218 TVLPNVNSTVYYDPRALSPNLEFVVLEAFDFYTPARNPKEADYPSPLYELVD 269


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 308 GNIVLASFELPESNIDCDPTLTLSL*FVQYPSIFEG 201
           GNI +  + +P  NI+  P + L+   + +  + +G
Sbjct: 151 GNIAMELWNMPRENIEPLPNVILACHMLSFLMVHQG 186


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 644 CCLRAIQKWARKRQQLGCSQSS*CMRIL 561
           CC  A+      RQ +  S+   C+R +
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 644 CCLRAIQKWARKRQQLGCSQSS*CMRIL 561
           CC  A+      RQ +  S+   C+R +
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIRYM 534


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 576 MYEDTSFLISSNLGSLYGGSVESFCLLL 493
           ++ D S ++   LG  Y G    +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 576 MYEDTSFLISSNLGSLYGGSVESFCLLL 493
           ++ D S ++   LG  Y G    +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,122
Number of Sequences: 336
Number of extensions: 4014
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)