Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00689
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 326 1e-91
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 320 1e-89
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 208 4e-56
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 178 4e-47
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 7.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 326 bits (802), Expect = 1e-91
Identities = 173/233 (74%), Positives = 181/233 (77%), Gaps = 4/233 (1%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 404
DKLKAERER ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 405 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM---IPLNHHTVSPDLRKSRRKY-PH 572
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM P T +++K Y
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Query: 573 TSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRMAVERKEGKADGKCSLK 731
A + +S D S P G VERKEGK +GKC ++
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEVS-SKMPWFKG--WTVERKEGKVEGKCLIE 230
Score = 129 bits (311), Expect = 3e-32
Identities = 66/82 (80%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKDGS 688
DSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFK G
Sbjct: 156 DSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFK-GW 214
Query: 689 GA*RRQS--*RKMLIEALDAIL 748
R++ K LIEALDAIL
Sbjct: 215 TVERKEGKVEGKCLIEALDAIL 236
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 320 bits (785), Expect = 1e-89
Identities = 163/226 (72%), Positives = 174/226 (76%), Gaps = 1/226 (0%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 404
DKLKAERER ITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 405 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRRKYPHTSRR 584
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM + + +++ ++
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 585 LATTQLLSLSCPFLDGTETTCWSLQPKCLGSR-MAVERKEGKADGK 719
+ P PK + VERK+G ADGK
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGK 226
Score = 120 bits (289), Expect = 1e-29
Identities = 61/82 (74%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKDGS 688
D T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+K G
Sbjct: 156 DMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYK-GW 214
Query: 689 GA*RR--QS*RKMLIEALDAIL 748
R+ + K LIEALDAIL
Sbjct: 215 KVERKDGNADGKTLIEALDAIL 236
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 208 bits (508), Expect = 4e-56
Identities = 117/176 (66%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
Frame = +3
Query: 216 WVLDKLKAERERRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 395
WVLDKLKAERER ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 396 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM---IPLNHHTVSPDLRKSRRKY 566
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM P T +++K Y
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 567 -PHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRMAVERKEGKADGKCSLK 731
A + +S D S P G VERKEGK +GKC ++
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVS-SKMPWFKG--WTVERKEGKVEGKCLIE 173
Score = 129 bits (311), Expect = 3e-32
Identities = 66/82 (80%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKDGS 688
DSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFK G
Sbjct: 99 DSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFK-GW 157
Query: 689 GA*RRQS--*RKMLIEALDAIL 748
R++ K LIEALDAIL
Sbjct: 158 TVERKEGKVEGKCLIEALDAIL 179
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 178 bits (434), Expect = 4e-47
Identities = 102/160 (63%), Positives = 110/160 (68%), Gaps = 4/160 (2%)
Frame = +3
Query: 264 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 443
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 444 REHALLAFTLGVKQLIVGVNKM---IPLNHHTVSPDLRKSRRKY-PHTSRRLATTQLLSL 611
REHALLAFTLGVKQLIVGVNKM P T +++K Y A + +
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 612 SCPFLDGTETTCWSLQPKCLGSRMAVERKEGKADGKCSLK 731
S D S P G VERKEGK +GKC ++
Sbjct: 121 SGWHGDNMLEVS-SKMPWFKG--WTVERKEGKVEGKCLIE 157
Score = 129 bits (311), Expect = 3e-32
Identities = 66/82 (80%), Positives = 69/82 (84%), Gaps = 2/82 (2%)
Frame = +2
Query: 509 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKDGS 688
DSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFK G
Sbjct: 83 DSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFK-GW 141
Query: 689 GA*RRQS--*RKMLIEALDAIL 748
R++ K LIEALDAIL
Sbjct: 142 TVERKEGKVEGKCLIEALDAIL 163
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 303 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 407
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKST 110
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 66 INIVVIGHVDSGKST 110
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 288 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 389
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 288 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 389
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 482 TAHRRSKQNDSTEPPYSEPRFEEIKKEV 565
T+ R++ S PP ++PR E + + V
Sbjct: 725 TSLERTQPTMSQMPPTAQPRMERLAEAV 752
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 58 FSLPIFG*SRITNCV 14
FSLPIFG I +C+
Sbjct: 57 FSLPIFGTRWIFSCI 71
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 664 FG*RLQHVVSVPSRNGHESDSSWV 593
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,136
Number of Sequences: 438
Number of extensions: 4578
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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