Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00688
(404 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 107 8e-23
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 84 9e-16
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 77 2e-13
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 67 1e-10
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 67 1e-10
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 66 3e-10
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 64 1e-09
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 60 2e-08
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 60 2e-08
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 59 3e-08
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 54 1e-06
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 52 4e-06
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 50 2e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 5e-05
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 48 9e-05
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 46 3e-04
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 46 4e-04
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 45 5e-04
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 45 5e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 44 0.002
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 43 0.002
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 43 0.002
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 43 0.003
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 42 0.006
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 41 0.011
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 39 0.033
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 37 0.13
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 37 0.18
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.71
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 35 0.71
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 34 0.94
UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1; Halo... 34 0.94
UniRef50_A1D3E0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q10209 Cluster: Uncharacterized J domain-containing pro... 31 6.6
UniRef50_Q4RYN6 Cluster: Chromosome 16 SCAF14974, whole genome s... 31 8.7
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 8.7
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 107 bits (257), Expect = 8e-23
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 192
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 193 HAQYEKRAMELLKVSKDKRAL 255
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 58.4 bits (135), Expect = 5e-08
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K + KFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 84.2 bits (199), Expect = 9e-16
Identities = 46/80 (57%), Positives = 55/80 (68%)
Frame = +1
Query: 16 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 195
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 196 AQYEKRAMELLKVSKDKRAL 255
A YE+RAMELLKVSKDKRAL
Sbjct: 51 APYERRAMELLKVSKDKRAL 70
Score = 56.0 bits (129), Expect = 3e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K + KF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 65 KDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +1
Query: 112 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 255
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRAL
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRAL 50
Score = 56.8 bits (131), Expect = 2e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K + KFLKRRLGTHIRAKRKREELSN+L QM K
Sbjct: 45 KDKRALKFLKRRLGTHIRAKRKREELSNILTQMGK 79
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 67.3 bits (157), Expect = 1e-10
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1
Query: 22 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 201
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 202 YEKRAMELLKVSKDKRAL 255
YEKR ELLKV KDKRAL
Sbjct: 56 YEKRITELLKVGKDKRAL 73
Score = 40.7 bits (91), Expect = 0.011
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMR 338
K + K KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 68 KDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 67.3 bits (157), Expect = 1e-10
Identities = 41/102 (40%), Positives = 52/102 (50%)
Frame = +1
Query: 22 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 201
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 202 YEKRAMELLKVSKDKRALSS*SDDWAHTSAPRGSVKNLATCS 327
YEKR ELLKV KDKRAL + H+ + + CS
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVGHSQESKEEERGDVQCS 97
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 66.1 bits (154), Expect = 3e-10
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +1
Query: 34 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 213
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 214 AMELLKVSKDKRAL 255
+E+L++SKDKRAL
Sbjct: 59 VLEMLRISKDKRAL 72
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K + KFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 67 KDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 64.1 bits (149), Expect = 1e-09
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +1
Query: 10 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 189
+I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++REV
Sbjct: 8 KIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVC 59
Query: 190 GHAQYEKRAMELLK---VSKDKRAL 255
G A YE+ +EL+K S KRAL
Sbjct: 60 GFAPYERHMIELIKTGSASAQKRAL 84
Score = 31.9 bits (69), Expect = 5.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 255 KFLKRRLGTHIRAKRKREELSNVLAQMRK 341
KF K+RLGT RAK K +E+ V+ RK
Sbjct: 85 KFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 60.1 bits (139), Expect = 2e-08
Identities = 35/72 (48%), Positives = 42/72 (58%)
Frame = +1
Query: 40 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 219
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 220 ELLKVSKDKRAL 255
ELLKV KDKRAL
Sbjct: 62 ELLKVGKDKRAL 73
Score = 44.4 bits (100), Expect = 9e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMR 338
K + K KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 68 KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 59.7 bits (138), Expect = 2e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 88 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRA 252
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRA 67
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 59.3 bits (137), Expect = 3e-08
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +1
Query: 19 APRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHA 198
A R + G+ KG TT I RP+ KGL+T+ FVR ++REV G +
Sbjct: 97 AQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREVAGFS 146
Query: 199 QYEKRAMELLKVSKDKRA 252
YEKR MELL+ SKDK+A
Sbjct: 147 PYEKRVMELLRNSKDKKA 164
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K + K K+RLGT +R+KRK EELS V+ + R+
Sbjct: 160 KDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 54.0 bits (124), Expect = 1e-06
Identities = 38/91 (41%), Positives = 51/91 (56%)
Frame = +1
Query: 34 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 213
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 214 AMELLKVSKDKRALSS*SDDWAHTSAPRGSV 306
MELL V ++ L+S SAPR SV
Sbjct: 60 MMELLLVI--RKLLNSQRPVLELISAPRRSV 88
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 52.0 bits (119), Expect = 4e-06
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 234
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 235 SKDKRAL 255
+DK AL
Sbjct: 69 FQDKLAL 75
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 50.0 bits (114), Expect = 2e-05
Identities = 31/79 (39%), Positives = 46/79 (58%)
Frame = +1
Query: 16 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 195
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 196 AQYEKRAMELLKVSKDKRA 252
+ YE+R ++L++ S +KRA
Sbjct: 51 SPYERRLIDLIRNSGEKRA 69
Score = 33.1 bits (72), Expect = 2.2
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 255 KFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K K+RLG+ RAK K EE++N++A R+
Sbjct: 71 KVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +1
Query: 100 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 249
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 47.6 bits (108), Expect = 9e-05
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +1
Query: 25 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 204
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 205 EKRAMELLKVSKDK 246
EKR +EL K ++ K
Sbjct: 56 EKRIIELFKTNQPK 69
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +3
Query: 255 KFLKRRLGTHIRAKRKREELSNVLAQMRK 341
+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 73 RLIKKRVGTHVRAKRETEELSNVLAAIRK 101
Score = 31.9 bits (69), Expect = 5.0
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 205 EKRAMELLKVSKDKRAL 255
++RAMELLKVSKDKR L
Sbjct: 56 QRRAMELLKVSKDKRTL 72
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 45.6 bits (103), Expect = 4e-04
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSN 320
K + KF+K+R+GTHIRAKRKREELSN
Sbjct: 5 KDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 45.2 bits (102), Expect = 5e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 142 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 255
Q+ + VR ++ EV G A YEKR +ELL++ KDKRAL
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRAL 65
Score = 41.9 bits (94), Expect = 0.005
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMR 338
K + KF K+RLGTH+RAKRKRE+++ L R
Sbjct: 60 KDKRALKFAKKRLGTHLRAKRKREQMAEALRSKR 93
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 45.2 bits (102), Expect = 5e-04
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = +1
Query: 10 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 189
E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 190 GHAQYEKRAMELLKVSKDKRAL 255
G + E+R ELL+V KDKRAL
Sbjct: 57 GFSPMERRVQELLRVGKDKRAL 78
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMR 338
KR+ + R+LGTH RAKRKREE+SNVL +MR
Sbjct: 22 KRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +1
Query: 16 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 195
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 196 AQYEKRAMELLKVSKDKRA 252
Y+ + L KVS DK A
Sbjct: 51 MSYDWCTVVLPKVSNDKCA 69
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 234 VKRQACS-KFLKRRLGTHIRAKRKREELSNVLAQMRK 341
V C+ KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 63 VSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 133 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 255
K + TK +RD++RE+ G + YE+R ELLK DKRAL
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRAL 75
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 42.7 bits (96), Expect = 0.003
Identities = 27/71 (38%), Positives = 37/71 (52%)
Frame = +1
Query: 22 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 201
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 202 YEKRAMELLKV 234
YEKR +EL+KV
Sbjct: 57 YEKRLIELIKV 67
Score = 35.1 bits (77), Expect = 0.54
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 255 KFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K+ K++LGTH R K KREE+ ++ R+
Sbjct: 78 KYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K + KF+++ LGTHI AKRK ELSNVLA R+
Sbjct: 71 KDKQALKFIQKMLGTHICAKRKARELSNVLATTRE 105
Score = 35.9 bits (79), Expect = 0.31
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 249
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 250 AL 255
AL
Sbjct: 75 AL 76
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 40.7 bits (91), Expect = 0.011
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +1
Query: 22 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 201
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 202 YEKRAMELLKVSKDKRAL 255
EKR E L+V K+KRAL
Sbjct: 56 LEKRVQEFLRVGKEKRAL 73
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 39.1 bits (87), Expect = 0.033
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +1
Query: 151 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRAL 255
H +FV+ +++E G A YE +ELL+++KD+ AL
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHAL 63
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 37.1 bits (82), Expect = 0.13
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 145 TKHSKFVRDLVREVVGHAQYEKRAMELLKV 234
+K + ++D+VRE+ G + YEKR +EL+K+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKI 85
Score = 34.7 bits (76), Expect = 0.71
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 255 KFLKRRLGTHIRAKRKREELSNVLAQMRK 341
K+ K++LGTH R K KREE+ V+ R+
Sbjct: 96 KYAKKKLGTHKRGKAKREEIQKVVILQRR 124
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 36.7 bits (81), Expect = 0.18
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 145 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALS 258
TK V D++RE G YE+ M+LL+ DK+AL+
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALN 62
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.71
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 16 MAPRFEIAVGLRKGHKTTK 72
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 34.7 bits (76), Expect = 0.71
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 237 KRQACSKFLKRRLGTHIRAKRKREELSNVLAQ 332
+R+A +FLK+RLGTH RA +K L V+ +
Sbjct: 54 RRRAARQFLKKRLGTHRRAMKKLNTLEEVVQE 85
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.3 bits (75), Expect = 0.94
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 372 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRT 256
+G GD P + P SS + RC L SSWR I +RT
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPART 137
>UniRef50_A7D5T8 Cluster: Molybdopterin oxidoreductase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Molybdopterin
oxidoreductase - Halorubrum lacusprofundi ATCC 49239
Length = 996
Score = 34.3 bits (75), Expect = 0.94
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 91 GITDKAIRIRPARLKGLQTKHSKFVRDLVREV--VGHAQYEKRAMELLKVSKDKRALSS* 264
G TD I R L L+ + S++ + V E+ VG ++K A E +V + K
Sbjct: 405 GTTDGDIETRSVWLN-LRDELSEYTPERVNEITGVGRQTHQKIAREFAEVDRAKIIHGKG 463
Query: 265 SDDWAHTSAPRGSVKNLATCSLR*GRQ 345
+DW H S++ L T + GRQ
Sbjct: 464 VNDWYHNDLGNRSIQLLVTLTGNLGRQ 490
>UniRef50_A1D3E0 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 402
Score = 31.5 bits (68), Expect = 6.6
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = +1
Query: 91 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSK----DKRALS 258
G+TD+ I RP R +Q H K V + +R VG A + + + K D + +
Sbjct: 278 GVTDEEIATRPRRYLNIQMSHEK-VHEALRPFVGGAYTDDNGNIMRQADKKLLGDGKTVK 336
Query: 259 S*SDDWAHTSAPR 297
+ W TS R
Sbjct: 337 KTATSWNDTSGIR 349
>UniRef50_Q10209 Cluster: Uncharacterized J domain-containing
protein C4H3.01; n=1; Schizosaccharomyces pombe|Rep:
Uncharacterized J domain-containing protein C4H3.01 -
Schizosaccharomyces pombe (Fission yeast)
Length = 392
Score = 31.5 bits (68), Expect = 6.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 231 GVKRQACSKFLKRRLGTHIRAKR 299
GV R+ACS LK+R+ T +R KR
Sbjct: 322 GVLREACSNLLKKRVPTELRLKR 344
>UniRef50_Q4RYN6 Cluster: Chromosome 16 SCAF14974, whole genome
shotgun sequence; n=5; Clupeocephala|Rep: Chromosome 16
SCAF14974, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 551
Score = 31.1 bits (67), Expect = 8.7
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 103 KAIRIRPARLKGLQ---TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALSS*SDD 273
+A+ R +L LQ T+ + +R+ + +QY+ +EL+ + + + +
Sbjct: 19 RAVEFRLQQLHALQKMVTEKEADISSALRQDINRSQYDTPLLELISIENEIKLAIEKLSE 78
Query: 274 WAHTSAPRGSVKNLATCS 327
WA APR +NL T S
Sbjct: 79 WA---APRPVERNLLTIS 93
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 8.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 109 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 201
+R ARL G+QTKH+K D V+ AQ
Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,516,722
Number of Sequences: 1657284
Number of extensions: 6248284
Number of successful extensions: 15211
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 15000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15202
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -