Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00687
         (673 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    26   0.28 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   2.6  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   2.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.1  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 224 ARSGLAGTRSHRQEELNDLLAKLDELQAQAKNDVE 328
           A SGL    SH +  LNDLL   + L+    N+ E
Sbjct: 13  AASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESE 47


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +2

Query: 233 GLAGTRSHRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKT 373
           G   T++ +     DL   +DE +   +ND E  ++ +  A   Y T
Sbjct: 302 GPVATKAMKGYSDEDLREAIDEFKTPMRNDSERNRSPVRPATVQYDT 348


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 272 NDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 394
           N++   + E  A +  D+ L  + L      YKTLKE  ++
Sbjct: 95  NEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 618 GSGRFLLDFVGGLR 577
           GSG+++ DFVG  R
Sbjct: 264 GSGQYISDFVGSCR 277


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 618 GSGRFLLDFVGGLR 577
           GSG+++ DFVG  R
Sbjct: 302 GSGQYISDFVGSCR 315


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 57  LKLRHTQLWL 28
           L LRHT++WL
Sbjct: 220 LHLRHTKIWL 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,207
Number of Sequences: 438
Number of extensions: 2404
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)