Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00685
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0435 - 9384225-9384412,9385084-9385133,9385209-9385274,938... 93 2e-19
05_07_0344 + 29411767-29411961,29412692-29412741,29413295-294134... 93 2e-19
08_02_0471 - 17563245-17563488,17563564-17563655,17563941-175640... 89 2e-18
09_06_0023 - 20299435-20299528,20299666-20299757,20299873-202999... 64 1e-10
08_01_0208 + 1662101-1662223,1663130-1663243,1663327-1663468,166... 48 1e-05
04_04_1167 + 31432731-31433769,31433893-31433941,31434363-314344... 45 5e-05
07_01_0291 + 2113234-2113307,2113637-2113712,2113914-2114005,211... 45 7e-05
01_06_1271 + 35890317-35890762,35891113-35891173,35891669-358918... 37 0.014
01_03_0042 - 11893004-11893645 36 0.033
09_04_0646 - 19194261-19195730 35 0.057
02_05_1032 + 33637108-33638421 35 0.057
06_01_0610 - 4415080-4415461,4415872-4416851 34 0.13
05_04_0020 - 17199627-17199947,17200129-17200203,17200301-172003... 34 0.13
03_02_0573 - 9571040-9571234,9571352-9571444,9571735-9571818,957... 34 0.13
08_02_1326 - 26158279-26159712 33 0.17
03_02_0550 + 9407280-9407375,9407474-9407560,9408230-9408317,940... 33 0.17
01_07_0324 - 42731581-42731696,42731791-42731926,42732006-427320... 32 0.53
07_03_1661 + 28441201-28441987,28442092-28442171,28442442-284425... 31 0.70
05_04_0155 + 18595193-18596224,18596863-18597264 30 1.6
03_02_0371 + 7858170-7859624 30 1.6
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 30 1.6
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687... 30 2.1
01_05_0804 + 25378929-25379036,25379209-25379526,25379914-25380546 30 2.1
03_02_1003 - 13127251-13128468 29 2.8
04_04_1402 + 33287844-33287963,33288049-33288155,33288877-332889... 29 4.9
07_01_0873 - 7257016-7257957,7260083-7260262 28 6.5
03_06_0445 - 33982018-33982965,33984308-33984463 28 6.5
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 28 6.5
02_03_0131 - 15576422-15577021 28 6.5
10_08_0016 + 14127200-14127615,14127723-14127816,14127904-141280... 28 8.6
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126... 28 8.6
01_06_0937 + 33175966-33178020 28 8.6
>09_02_0435 -
9384225-9384412,9385084-9385133,9385209-9385274,
9385360-9385451,9385893-9385975,9386181-9386259,
9386888-9387115,9387196-9387297,9387719-9387854,
9387984-9388033,9389391-9389618
Length = 433
Score = 93.5 bits (222), Expect = 2e-19
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Frame = +1
Query: 268 ALQRAEKITGKK---ITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXX 438
A++R + G K ++ +K D+ DK + +F D V+HFA LKAVGES+
Sbjct: 57 AVRRVAALAGDKARNLSLHKVDIRDKGGLEKVFSSTRFDAVVHFAGLKAVGESVQKPLLY 116
Query: 439 XXXXXXGMLNLLEIMRSHNCYQMGSRRHAQSTANLNTCRSRRLIPLEVSQMFTAERSTSS 618
G + LLE+M +H C ++ A + PL + + +
Sbjct: 117 YDHNVAGTIILLEVMAAHGCKKLVFSSSAAVYGSPKNSPCTEEFPLTPHNPYGRTKLIAE 176
Query: 619 RKCSKDLSAADDKWNIISLRYFNPVGAHPSGLIG 720
C +D+ +D +W+II LRYFNPVGAHPSG +G
Sbjct: 177 EIC-RDIYHSDSEWSIILLRYFNPVGAHPSGYLG 209
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVE 250
G +GYIGSH V+ LL AG V+ D+ NS E
Sbjct: 24 GGAGYIGSHTVLQLLAAGFRVVVADSLGNSSE 55
>05_07_0344 +
29411767-29411961,29412692-29412741,29413295-29413430,
29413931-29414032,29414153-29414380,29414460-29414544,
29414648-29414730,29414854-29414945,29415048-29415141
Length = 354
Score = 93.1 bits (221), Expect = 2e-19
Identities = 55/154 (35%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Frame = +1
Query: 268 ALQRAEKITG---KKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXX 438
A+ R ++ G + F K DL DK ++ IF + VIHFA LKAVGES+
Sbjct: 46 AILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLY 105
Query: 439 XXXXXXGMLNLLEIMRSHNCYQMGSRRHAQSTANLNTCRSRRLIPLEVSQMFTAERSTSS 618
G + LL++M +H C ++ A PL + +
Sbjct: 106 YDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIE 165
Query: 619 RKCSKDLSAADDKWNIISLRYFNPVGAHPSGLIG 720
C +DL A+D W II LRYFNPVGAHPSG IG
Sbjct: 166 DMC-RDLHASDPNWKIILLRYFNPVGAHPSGYIG 198
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 125 NAAIQEHISDGRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVE 250
+A ++ + G +GYIGSH V+ LL+ G V+ +DN N+ E
Sbjct: 3 SALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASE 44
>08_02_0471 -
17563245-17563488,17563564-17563655,17563941-17564023,
17564418-17564499,17565234-17565461,17565553-17565654,
17565818-17565953,17566080-17566129,17566465-17566572,
17568702-17568911
Length = 444
Score = 89.4 bits (212), Expect = 2e-18
Identities = 48/135 (35%), Positives = 66/135 (48%)
Frame = +1
Query: 316 KADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHN 495
+ DL DK + +F D V+HFA LKAVGES+ G +NLLE+M +H
Sbjct: 106 EVDLRDKGALEKVFASTRFDAVVHFAGLKAVGESVQKPLLYYDNNVNGTVNLLEVMSAHG 165
Query: 496 CYQMGSRRHAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKCSKDLSAADDKWNIISL 675
C ++ A + PL + + + C +D+ D +W II L
Sbjct: 166 CKKLVFSSSAAVYGSPKNSPCTEEFPLTPNNPYGKTKLVVEDIC-RDIYRTDPEWKIILL 224
Query: 676 RYFNPVGAHPSGLIG 720
RYFNPVGAHPSG +G
Sbjct: 225 RYFNPVGAHPSGYLG 239
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVE 250
G +GYIGSH V+ LL AG + +DN NS E
Sbjct: 18 GGAGYIGSHAVLQLLLAGFRAVVVDNLNNSSE 49
>09_06_0023 -
20299435-20299528,20299666-20299757,20299873-20299955,
20300066-20300147,20300235-20300462,20300646-20300747,
20300834-20300969,20301105-20301514
Length = 408
Score = 63.7 bits (148), Expect = 1e-10
Identities = 41/136 (30%), Positives = 57/136 (41%)
Frame = +1
Query: 313 YKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSH 492
++ DL K + +F D VIHFA LKAVGES+ G +NL M +
Sbjct: 119 FQGDLKSKDDMEKVFAAKRYDAVIHFAGLKAVGESVAHPQMYYENNVAGTMNLYSAMTKY 178
Query: 493 NCYQMGSRRHAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKCSKDLSAADDKWNIIS 672
C ++ A L + + + + AAD + +I
Sbjct: 179 GCKKIVFSSSATVYGQPEKTPCVEDSKLSALNPYGTTKLV-LENYFRQVQAADPEMRVIL 237
Query: 673 LRYFNPVGAHPSGLIG 720
LRYFNP+GAH SG IG
Sbjct: 238 LRYFNPIGAHRSGDIG 253
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDETD 262
G +GYIG+H V+ LLE G V +DNF NSV + D
Sbjct: 32 GGAGYIGTHTVLRLLEKGFAVTVVDNFHNSVPEALD 67
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLQRLK 641
FSSS TVYG+PE P E ++ N YG TK +E ++++
Sbjct: 185 FSSSATVYGQPEKTPCVEDSKLSAL-NPYGTTKLVLENYFRQVQ 227
>08_01_0208 +
1662101-1662223,1663130-1663243,1663327-1663468,
1663496-1663610,1663936-1664077,1664216-1664313,
1664396-1664525,1664740-1664884,1665163-1665389
Length = 411
Score = 47.6 bits (108), Expect = 1e-05
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +1
Query: 340 QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHNCYQMGSRR 519
Q+N IF ++ D V+HFAA+ VGES L +LE M SH G +
Sbjct: 134 QVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASH-----GVKT 188
Query: 520 HAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKCSKDLSAADDKWN----IISLRYFN 687
S+ ++ +E ++ ++K ++D+ K ++ LRYFN
Sbjct: 189 LIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFN 248
Query: 688 PVGAHPSGLIG 720
+G+ P G +G
Sbjct: 249 VIGSDPEGRLG 259
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 38 VISLIINRTIAVKLVYGRFKVNGSKKL-RNNAAIQEHISDGRSGYIGSHCVVTLLEAGHE 214
VI+ ++ T+ + ++ GS R+ + + G +GYIGSH + LL+ +
Sbjct: 16 VIAALVLTTLCIFILKQSPGFGGSSVFSRHEPGVTHVLVTGGAGYIGSHASLRLLKDNYR 75
Query: 215 VIAIDNFT 238
V +DN +
Sbjct: 76 VTIVDNLS 83
>04_04_1167 +
31432731-31433769,31433893-31433941,31434363-31434427,
31435237-31435346,31436327-31436388,31438067-31438113,
31438148-31438272,31438651-31438764,31438852-31438979,
31439059-31439154,31439565-31439706,31439799-31439893,
31439966-31440095,31440179-31440323,31440430-31440656
Length = 857
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/127 (25%), Positives = 52/127 (40%)
Frame = +1
Query: 340 QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHNCYQMGSRR 519
Q+N IF ++ D V+HFAA+ VGES L +LE M ++N +
Sbjct: 581 QVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAAYNVKTLIYSS 640
Query: 520 HAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKCSKDLSAADDKWNIISLRYFNPVGA 699
+ +T P + + + D S + ++ LRYFN +G+
Sbjct: 641 TCATYGEPDTMPITEATPQNPINPY-GKAKKMAEDIILDFSKRSEM-AVMILRYFNVIGS 698
Query: 700 HPSGLIG 720
P G +G
Sbjct: 699 DPGGRLG 705
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEML 629
+SS+C YGEP+ +PITE P I N YG+ K E+++
Sbjct: 638 YSSTCATYGEPDTMPITEATPQNPI-NPYGKAKKMAEDII 676
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 119 RNNAAIQEHISDGRSGYIGSHCVVTLLEAGHEVIAIDNFT 238
R+ + + G +GYIGSH + LL + V +DN +
Sbjct: 502 RHEIGVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLS 541
>07_01_0291 +
2113234-2113307,2113637-2113712,2113914-2114005,
2114079-2114220,2114297-2114397,2114490-2114619,
2114775-2114919,2115034-2115275
Length = 333
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Frame = +1
Query: 340 QINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHNCYQMGSRR 519
++N IF ++ D V+HFAA+ VGES L +LE M +HN R
Sbjct: 50 KVNRIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVLEAMAAHNV-----RT 104
Query: 520 HAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKCSKDLSAADDK-----WNIISLRYF 684
S+ ++ E + F ++K ++D+ K ++ LRYF
Sbjct: 105 LIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYF 164
Query: 685 NPVGAHPSGLIG 720
N +G+ P G +G
Sbjct: 165 NVIGSDPEGRLG 176
>01_06_1271 +
35890317-35890762,35891113-35891173,35891669-35891813,
35891903-35891982,35892465-35892548,35892644-35892718,
35893150-35893242,35893315-35893503
Length = 390
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVED 253
G +G++GSH V LLE G VI +DNF +D
Sbjct: 107 GGAGFVGSHLVDRLLEQGDSVIVVDNFFTGRKD 139
>01_03_0042 - 11893004-11893645
Length = 213
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVED 253
G +G++GSH V L+E G VI +DNF +D
Sbjct: 119 GGAGFVGSHLVDRLVERGDSVIVVDNFFTGRKD 151
>09_04_0646 - 19194261-19195730
Length = 489
Score = 35.1 bits (77), Expect = 0.057
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 265 PALQRAEK--ITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXX 438
P L+RA + + G+ + AD+ D + +FD P V+H AA V +M
Sbjct: 155 PELKRARQRLLAGRGVLVLDADINDALLLEKLFDLVPFTHVLHLAAQAGVRYAMEAPQTY 214
Query: 439 XXXXXXGMLNLLEIMRSH 492
G++ +LE+ H
Sbjct: 215 VASNVAGLVTVLEVAAKH 232
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 95 KVNGSKKLRNNAAIQEHISDGRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVEDE 256
+V S K R + I ++ G +G++G+HC + L G V+ +DNF + E
Sbjct: 104 EVRRSAKPRKDGGIAVLVT-GAAGFVGTHCSLALRARGDGVLGLDNFNAYYDPE 156
>02_05_1032 + 33637108-33638421
Length = 437
Score = 35.1 bits (77), Expect = 0.057
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVED 253
G +G++G+HC + L + G V+ IDNF NS D
Sbjct: 103 GAAGFVGTHCSLALRKRGDGVVGIDNF-NSYYD 134
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEM 626
++SS +VYG + +P TE+ T ++Y TK EE+
Sbjct: 220 WASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEI 258
>06_01_0610 - 4415080-4415461,4415872-4416851
Length = 453
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVED 253
G +G++G+HC + L + G V+ IDN+ NS D
Sbjct: 115 GAAGFVGAHCSLALRKRGDGVVGIDNY-NSYYD 146
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTK 608
++SS +VYG + +P +E H T ++Y TK
Sbjct: 232 WASSSSVYGLNDAVPFSEAHRTDKPASLYAATK 264
>05_04_0020 -
17199627-17199947,17200129-17200203,17200301-17200384,
17200483-17200562,17201354-17201508,17202602-17203215
Length = 442
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDN-FTNSVED 253
G +G++GSH V L+E G VI +DN FT E+
Sbjct: 131 GGAGFVGSHLVDRLVERGDSVIVVDNLFTGRKEN 164
>03_02_0573 -
9571040-9571234,9571352-9571444,9571735-9571818,
9572401-9572480,9572609-9572759,9573067-9573579
Length = 371
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNF 235
G +G++GSH V LL G VI +DNF
Sbjct: 114 GGAGFVGSHLVDELLARGDSVIVVDNF 140
>08_02_1326 - 26158279-26159712
Length = 477
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNSVED 253
G +G++G+HC + L G V+ +DNF NS D
Sbjct: 129 GAAGFVGAHCSLALRARGDGVVGLDNF-NSYYD 160
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 265 PALQRAEK--ITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXX 438
P+L+RA + + + + AD+ D + +FD V+H AA V +M
Sbjct: 161 PSLKRARQRLLASRGVAVLDADINDAALLERLFDAARFTHVLHLAAQAGVRYAMRAPQTY 220
Query: 439 XXXXXXGMLNLLEIMRSH 492
G++++ E+ H
Sbjct: 221 VASNVAGLVSVFEVAAKH 238
>03_02_0550 +
9407280-9407375,9407474-9407560,9408230-9408317,
9408871-9408962,9409068-9409132,9409220-9409308,
9409402-9409479,9409567-9409660,9409745-9409811,
9409907-9409970,9410096-9410136,9410221-9410412
Length = 350
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLE-AGHEVIAIDNFTNSVED 253
G +G+IGSH V L+E HEVI DNF +D
Sbjct: 41 GGAGFIGSHLVDKLMENEKHEVIVADNFFTGSKD 74
>01_07_0324 -
42731581-42731696,42731791-42731926,42732006-42732098,
42732189-42732290,42732383-42732516,42732593-42732707,
42733534-42733560,42733692-42733799,42733890-42733982,
42734066-42734365
Length = 407
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 155 GRSGYIGSH-CVVTLLEAGHEVIAIDNFTNSVEDETDP 265
G G+IGSH C + E H V A+D + + + DP
Sbjct: 32 GAGGFIGSHLCEKLMAETAHVVYAVDVYCDKIRHLVDP 69
>07_03_1661 +
28441201-28441987,28442092-28442171,28442442-28442525,
28443181-28443255,28443704-28444015
Length = 445
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDN-FTNSVED 253
G +G++GSH V LL G V+ +DN FT E+
Sbjct: 132 GGAGFVGSHLVDRLLARGDSVMVVDNLFTGRKEN 165
>05_04_0155 + 18595193-18596224,18596863-18597264
Length = 477
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 271 LQRAEKITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESM 420
++R + +TGK I Y D+ D ++ F D +HF ++ SM
Sbjct: 141 IRRWKALTGKTIQLYVGDICDFDFLSEAFKSFEPDSAVHFGEQRSAPYSM 190
>03_02_0371 + 7858170-7859624
Length = 484
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 95 KVNGSKKLRN-NAAIQEHISDGRSGYIGSHCVVTLLEAGHEVIAIDNFTN 241
KV S ++R N + G +G++G H L G V+ +DNF +
Sbjct: 104 KVRASARVRRANGRGLTVLVTGAAGFVGCHAAAALRRRGDGVLGLDNFND 153
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 265 PALQR--AEKITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXX 438
PAL+R A + + D+ D + +FD P V+H AA V ++
Sbjct: 157 PALKRGRAALLARSGVYVVDGDIADAELLAKLFDVVPFTHVLHLAAQAGVRHALVDPMSY 216
Query: 439 XXXXXXGMLNLLEIMRSHN 495
G + LLE R N
Sbjct: 217 VRANVGGFVALLEAARMAN 235
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEM 626
++SS +VYG H+P +E T ++Y TK EE+
Sbjct: 242 WASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKAGEEI 280
>01_01_0484 -
3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 575 WKYHKCLRQNEVLHRGNAPKT*ALLMINGTLSPS-GISTLSVHIL 706
W++ LR NE +H + L +IN +SPS + +++ H+L
Sbjct: 353 WRHENALRTNEAVHHFSEEIVCVLPVINLVISPSKSVKSVASHVL 397
>06_03_1496 - 30567968-30568210,30568345-30568513,30568635-30568736,
30569087-30571855,30572402-30572430,30572546-30572659,
30572735-30572846,30574730-30574845,30574928-30575068,
30575121-30575243,30575346-30575478,30575842-30575972,
30576065-30576300,30577073-30577376
Length = 1573
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 444 EQPAWDAQLIGDNAITQLLPNGFSSSCTVYGEPEHLPIT--ETHP 572
EQP W QL + + +L+ SSC + G+P++L ++ + HP
Sbjct: 1392 EQPFWRRQLF--DKVKELISGVKPSSCQISGDPKNLELSLCDLHP 1434
>01_05_0804 + 25378929-25379036,25379209-25379526,25379914-25380546
Length = 352
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFT 238
G SG++GS V+ LL+AG+ V A + T
Sbjct: 13 GASGFVGSWLVMKLLQAGYTVRATERLT 40
>03_02_1003 - 13127251-13128468
Length = 405
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAI 226
G +GYIG + V LL GH V+A+
Sbjct: 79 GATGYIGRYVVRELLRRGHPVVAV 102
>04_04_1402 +
33287844-33287963,33288049-33288155,33288877-33288956,
33289133-33289225,33289332-33289471,33289580-33289672,
33289769-33289836,33290108-33290111
Length = 234
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 89 RFKVNGSKKLRNNAAIQEHISDGRSGYIGSHCVVTLLEAGHEVI-AIDNFTNSVEDETDP 265
RF+ N +L +A I + + GY C T E V+ AI+N+TN++ED + P
Sbjct: 74 RFRGNRLPELSVHAMIDKTLRTIMYGYGYGDCHNTNGEKDMCVVGAINNYTNALEDSSSP 133
>07_01_0873 - 7257016-7257957,7260083-7260262
Length = 373
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 404 QLGNRCSNPYYTTRTTCLGCSTYWR*C 484
QL R ++ TT TC+ C+ +W+ C
Sbjct: 347 QLQTRSADEPMTTFVTCVNCNNHWKFC 373
>03_06_0445 - 33982018-33982965,33984308-33984463
Length = 367
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 404 QLGNRCSNPYYTTRTTCLGCSTYWR*C 484
QL R ++ TT TC+ C+ +W+ C
Sbjct: 341 QLQTRSADEPMTTFVTCVNCNNHWKFC 367
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 393 GTQSSWGIDAATLIILPEQPAWDAQLIGDNAITQLLPNGFSSSCTVYGEPEHLP 554
G S + I I+L + A++IG++++ +L SSS + + HLP
Sbjct: 113 GVLSYYKIHGPDRIVLSRETERGAKVIGEDSLRRLSRPSTSSSSSAHSNGHHLP 166
>02_03_0131 - 15576422-15577021
Length = 199
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 157 AERIHRKSLRSHTAGSRS*GHCN*QLH*LGRRRDGSPALQRAEKITGKK 303
A+R HR+ SH+ RS + H RRRDGSPA + KK
Sbjct: 70 ADRSHRRHSHSHSHRGRSSPSPDAGRH--KRRRDGSPAAAATDHKDDKK 116
>10_08_0016 +
14127200-14127615,14127723-14127816,14127904-14128033,
14128113-14128245,14128342-14128549,14128683-14128838
Length = 378
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 155 GRSGYIGSHCVVTLLEAGHEVIAID 229
G G+IGSH L GH +IA D
Sbjct: 36 GAGGFIGSHIARRLKSEGHYIIASD 60
>01_07_0238 +
42209407-42209964,42210039-42210561,42212577-42212665,
42212981-42213191,42213265-42213446,42213573-42213812,
42214691-42214878,42215230-42215323,42215407-42215463,
42215552-42215686,42216460-42216525,42216745-42216858,
42217849-42218010,42218093-42218221,42218323-42218424,
42219428-42219504,42219600-42219957
Length = 1094
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 562 RLIPLEVSQMFTAERSTSSRKCSKDLSAADDKWNII 669
R++PL S + + S+RKC S ++ WN++
Sbjct: 446 RIVPLAESVQQASNMAKSARKCEDLKSCSNQLWNLL 481
>01_06_0937 + 33175966-33178020
Length = 684
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -1
Query: 509 PIW*QLCDR-IISNKLSIPSRLFW*YNKGCCIDSPTALSAAKWITQSTGCLSKIALICGL 333
PI LCDR + LS+ + ++GC T + + +STG + ++ +
Sbjct: 150 PIIRGLCDRGRVGEALSLLDDML---HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 332 SSKSAL*NVIFFPVIFSALCKAG 264
+K N++ + VI + +C+ G
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREG 229
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,818
Number of Sequences: 37544
Number of extensions: 379373
Number of successful extensions: 965
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -