Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00685
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058582-1|AAL13811.1|  350|Drosophila melanogaster LD27852p pro...   104   1e-22
AE014296-117|AAF47398.1|  350|Drosophila melanogaster CG12030-PA...   104   1e-22
AY113313-1|AAM29318.1|  266|Drosophila melanogaster AT27946p pro...    67   2e-11
AY051913-1|AAK93337.1|  441|Drosophila melanogaster LD39959p pro...    38   0.010
AE014296-1387|AAF50474.1|  441|Drosophila melanogaster CG7979-PA...    38   0.010
AY058410-1|AAL13639.1|  367|Drosophila melanogaster GH18546p pro...    30   2.8  
AE014296-3373|AAF51607.1|  367|Drosophila melanogaster CG5955-PA...    30   2.8  

>AY058582-1|AAL13811.1|  350|Drosophila melanogaster LD27852p
           protein.
          Length = 350

 Score =  104 bits (249), Expect = 1e-22
 Identities = 56/151 (37%), Positives = 77/151 (50%)
 Frame = +1

Query: 268 ALQRAEKITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXX 447
           AL R ++ITGKK+ FY+ D+ D+ Q+ ++F +H +D V HFAALKAVGES          
Sbjct: 49  ALSRVQEITGKKVNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHN 108

Query: 448 XXXGMLNLLEIMRSHNCYQMGSRRHAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKC 627
              G   LLE M  +N ++      A               P         +    + + 
Sbjct: 109 NMTGTNVLLEAMADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEI 168

Query: 628 SKDLSAADDKWNIISLRYFNPVGAHPSGLIG 720
            KDL  +D +W ++SLRYFNPVGAH SG IG
Sbjct: 169 LKDLCKSDKRWAVVSLRYFNPVGAHISGRIG 199



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +3

Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLQRL 638
           +SSS TVYGEP+ LP+TE HPTG+ T+ YG+TKYF EE+L+ L
Sbjct: 130 YSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDL 172



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +2

Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNS 244
           G +GYIGSH V+ +L AG+ VI +DN  N+
Sbjct: 10  GGAGYIGSHTVLEMLNAGYNVICVDNLCNA 39


>AE014296-117|AAF47398.1|  350|Drosophila melanogaster CG12030-PA
           protein.
          Length = 350

 Score =  104 bits (249), Expect = 1e-22
 Identities = 56/151 (37%), Positives = 77/151 (50%)
 Frame = +1

Query: 268 ALQRAEKITGKKITFYKADLLDKPQINAIFDKHPVDCVIHFAALKAVGESMXXXXXXXXX 447
           AL R ++ITGKK+ FY+ D+ D+ Q+ ++F +H +D V HFAALKAVGES          
Sbjct: 49  ALSRVQEITGKKVNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHN 108

Query: 448 XXXGMLNLLEIMRSHNCYQMGSRRHAQSTANLNTCRSRRLIPLEVSQMFTAERSTSSRKC 627
              G   LLE M  +N ++      A               P         +    + + 
Sbjct: 109 NMTGTNVLLEAMADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEI 168

Query: 628 SKDLSAADDKWNIISLRYFNPVGAHPSGLIG 720
            KDL  +D +W ++SLRYFNPVGAH SG IG
Sbjct: 169 LKDLCKSDKRWAVVSLRYFNPVGAHISGRIG 199



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +3

Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLQRL 638
           +SSS TVYGEP+ LP+TE HPTG+ T+ YG+TKYF EE+L+ L
Sbjct: 130 YSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDL 172



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +2

Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNFTNS 244
           G +GYIGSH V+ +L AG+ VI +DN  N+
Sbjct: 10  GGAGYIGSHTVLEMLNAGYNVICVDNLCNA 39


>AY113313-1|AAM29318.1|  266|Drosophila melanogaster AT27946p
           protein.
          Length = 266

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +3

Query: 510 FSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLQRL 638
           +SSS TVYGEP+ LP+TE HPTG+ T+ YG+TKYF EE+L+ L
Sbjct: 46  YSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDL 88



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 40/114 (35%), Positives = 50/114 (43%)
 Frame = +1

Query: 379 VIHFAALKAVGESMXXXXXXXXXXXXGMLNLLEIMRSHNCYQMGSRRHAQSTANLNTCRS 558
           V HFAALKAVGES             G   LLE M  +N ++      A           
Sbjct: 2   VAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVFKFVYSSSATVYGEPKFLPV 61

Query: 559 RRLIPLEVSQMFTAERSTSSRKCSKDLSAADDKWNIISLRYFNPVGAHPSGLIG 720
               P         +    + +  KDL  +D +W ++SLRYFNPVGAH SG IG
Sbjct: 62  TEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLRYFNPVGAHISGRIG 115


>AY051913-1|AAK93337.1|  441|Drosophila melanogaster LD39959p
           protein.
          Length = 441

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +2

Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNF 235
           G +G++GSH V  L+  GHEVI +DNF
Sbjct: 122 GGAGFVGSHLVDDLMVQGHEVIVVDNF 148


>AE014296-1387|AAF50474.1|  441|Drosophila melanogaster CG7979-PA
           protein.
          Length = 441

 Score = 38.3 bits (85), Expect = 0.010
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +2

Query: 155 GRSGYIGSHCVVTLLEAGHEVIAIDNF 235
           G +G++GSH V  L+  GHEVI +DNF
Sbjct: 122 GGAGFVGSHLVDDLMVQGHEVIVVDNF 148


>AY058410-1|AAL13639.1|  367|Drosophila melanogaster GH18546p
           protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 319 ADLLDKPQINAIFDKHPVDCVIHFAA-LKAVGE 414
           AD+LD   +  I   H +D +IHF+A L AVGE
Sbjct: 95  ADILDFKGLQKIVVDHRIDWLIHFSALLSAVGE 127


>AE014296-3373|AAF51607.1|  367|Drosophila melanogaster CG5955-PA
           protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 319 ADLLDKPQINAIFDKHPVDCVIHFAA-LKAVGE 414
           AD+LD   +  I   H +D +IHF+A L AVGE
Sbjct: 95  ADILDFKGLQKIVVDHRIDWLIHFSALLSAVGE 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,697,882
Number of Sequences: 53049
Number of extensions: 646789
Number of successful extensions: 1553
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1553
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)