Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00683
(509 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16; Euk... 105 6e-22
UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY0677... 83 5e-15
UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3; Plasmod... 81 2e-14
UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14... 80 3e-14
UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2; ... 77 2e-13
UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),... 74 2e-12
UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n... 71 2e-11
UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11; ... 71 2e-11
UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1; ... 66 4e-10
UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3; ... 64 2e-09
UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, wh... 62 7e-09
UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia vil... 61 2e-08
UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 54 2e-06
UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 43 0.004
UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Re... 43 0.004
UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida a... 42 0.006
UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1; C... 36 0.71
UniRef50_P0C074 Cluster: RDS3 complex subunit 10; n=2; Saccharom... 33 2.8
UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1; Bigelowi... 33 3.8
UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5; Trypanosomat... 33 5.0
UniRef50_A0CM16 Cluster: Chromosome undetermined scaffold_21, wh... 32 6.6
UniRef50_A7RM54 Cluster: Predicted protein; n=1; Nematostella ve... 32 8.7
UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces el... 32 8.7
>UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16;
Eukaryota|Rep: Splicing factor 3B subunit 5 - Homo
sapiens (Human)
Length = 86
Score = 105 bits (252), Expect = 6e-22
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
M +RY IHSQLEHLQSKYIGTGHADTTK+EWL+NQHRDS CSYMGH DLL+YF
Sbjct: 1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYF 53
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +2
Query: 227 GSSGFVELLSIVENESKARVKFNLMERMLQPCGPPPEKPED 349
G + +I ENESKARV+FNLME+MLQPCGPP +KPE+
Sbjct: 45 GHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEE 85
>UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY06774;
n=4; Aconoidasida|Rep: Putative uncharacterized protein
PY06774 - Plasmodium yoelii yoelii
Length = 103
Score = 82.6 bits (195), Expect = 5e-15
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 FKNKMG--ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
F KM +R+NIH+QLEHLQSKY G+GHADTT++EWL N HRD+ S++GH L+YF
Sbjct: 24 FTEKMSTFDRFNIHAQLEHLQSKYQGSGHADTTRWEWLTNIHRDTLASHVGHYSRLAYF 82
>UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
vivax
Length = 88
Score = 80.6 bits (190), Expect = 2e-14
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +3
Query: 102 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
+R+NIH+QLEHLQSKY G+GH+DTT++EWL N HRD+ S++GH L+YF
Sbjct: 5 DRFNIHAQLEHLQSKYQGSGHSDTTRWEWLTNIHRDTLASHVGHYSRLAYF 55
>UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14;
Eukaryota|Rep: Uncharacterized protein At3g23325 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 80.2 bits (189), Expect = 3e-14
Identities = 32/51 (62%), Positives = 43/51 (84%)
Frame = +3
Query: 102 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
+R+NI+SQLEHLQ+KY+GTGHAD +++EW +N RDS SY+GH +LSYF
Sbjct: 5 DRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYF 55
Score = 42.7 bits (96), Expect = 0.005
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 227 GSSGFVELLSIVENESKARVKFNLMERMLQPCGPPPEKPED 349
G + +I ENES R ++N M++ML PCG PPE+ ++
Sbjct: 47 GHYPMLSYFAIAENESIGRERYNFMQKMLLPCGLPPEREDE 87
>UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 87
Score = 77.0 bits (181), Expect = 2e-13
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +3
Query: 105 RYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
RY ++QLE L ++Y GTGHADTTKYEWL +QHRD+ S +GHP LL+Y
Sbjct: 6 RYTANTQLEQLHARYTGTGHADTTKYEWLTHQHRDTLASIVGHPPLLAY 54
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 212 LLQLHGSSGFVELLSIVENESKARVKFNLMERMLQPCGPPPEKPED 349
L + G + LS+ + E +AR +F + E+MLQPCG PP K E+
Sbjct: 42 LASIVGHPPLLAYLSVADGECQARERFEVTEKMLQPCGKPPGKTEE 87
>UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),
putative; n=3; Eukaryota|Rep: Splicing factor 3B subunit
10 (SF3b10), putative - Babesia bovis
Length = 87
Score = 73.7 bits (173), Expect = 2e-12
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +3
Query: 102 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
+R+NIH+QLEHLQSKY GTGH + TK+EW +N RD+ S+ GH L+YF
Sbjct: 5 DRFNIHAQLEHLQSKYQGTGHVNNTKWEWALNIQRDTLASHAGHYTRLAYF 55
>UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 10 - Entamoeba histolytica HM-1:IMSS
Length = 100
Score = 70.9 bits (166), Expect = 2e-11
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +3
Query: 114 IHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
+ +QLEH+Q KY+GTGH D +KYEW+ NQ RDS SY+GH L++Y
Sbjct: 9 LQTQLEHMQLKYVGTGHPDISKYEWICNQQRDSYASYIGHHSLMAY 54
Score = 40.7 bits (91), Expect = 0.019
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 227 GSSGFVELLSIVENESKARVKFNLMERMLQPCG-PPPEK 340
G + +++ EN+S R ++ +ERM PCG PPPEK
Sbjct: 47 GHHSLMAYIAVAENQSIGRTRYQFLERMCDPCGKPPPEK 85
>UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11;
Ascomycota|Rep: Uncharacterized protein C211.05 -
Schizosaccharomyces pombe (Fission yeast)
Length = 85
Score = 70.9 bits (166), Expect = 2e-11
Identities = 28/52 (53%), Positives = 40/52 (76%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
M +R ++LE LQ++Y+G G+A TTKYEW++NQHRD+ S +GHP LL+Y
Sbjct: 1 MADRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAY 52
Score = 35.9 bits (79), Expect = 0.53
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 269 ESKARVKFNLMERMLQPCGPPP 334
E + +V+ NL+E+M+ PCGPPP
Sbjct: 59 EPRVQVRKNLLEKMIMPCGPPP 80
>UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 121
Score = 66.1 bits (154), Expect = 4e-10
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
M ++ +LE LQ+K+IGTGH DTT +EW N HRD+ S GHP LLSY
Sbjct: 1 MADKLRNQQELERLQAKFIGTGHPDTTSWEWKTNIHRDTYSSIAGHPPLLSY 52
>UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 111
Score = 63.7 bits (148), Expect = 2e-09
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
M ++ LE Q++YIGTGHADTTK+E+L N RDS SY+GHP LL Y
Sbjct: 1 MADKLRTLQNLEAQQARYIGTGHADTTKHEFLNNIVRDSYASYIGHPPLLGY 52
>UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 88
Score = 62.1 bits (144), Expect = 7e-09
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
M +R+N +Q EHL ++Y+GTG+ DT KY W + HRD+ S++GH + YF
Sbjct: 1 MQDRFNFQTQTEHLHARYVGTGNPDTPKYVWNNHIHRDTLASHIGHHSRMVYF 53
Score = 37.5 bits (83), Expect = 0.17
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 263 ENESKARVKFNLMERMLQPCGPPP 334
ENE R+++ + +M+QPCGPPP
Sbjct: 57 ENEPMCRLRYKFLTKMIQPCGPPP 80
>UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia
villosa|Rep: CG11985-like protein - Boltenia villosa
Length = 49
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 215 LQLHGSSGFVELLSIVENESKARVKFNLMERMLQPCGPPPEKP 343
LQ G + +SI ENE+KARV+FNL+ RM QPCGPPP++P
Sbjct: 4 LQYIGHPDLLSYISIAENEAKARVRFNLLXRMFQPCGPPPDRP 46
>UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 122
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3
Query: 138 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
QS+Y+G G+ DTTK EW N RDS SY+GHP +LS+
Sbjct: 51 QSRYLGVGNPDTTKQEWQTNVARDSYASYIGHPGVLSH 88
>UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 85
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 RYNIHSQLEHLQSKYIGTGHADTTK-YEWLMNQHRDSCCSYMGHPDLLSYF 254
R I+ QLE L SKY GTGH +T + EW N RD+ S + H +SYF
Sbjct: 6 RSTIYFQLEQLHSKYQGTGHINTKRSSEWGDNILRDTASSNIMHQSRISYF 56
>UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 87
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
M ++ + L+ KY+G G+ TTK EWL N +RD+ S GH L Y
Sbjct: 1 MSDKVRQQQLYQVLKQKYVGLGNEKTTKEEWLTNVNRDTYNSLQGHSASLEY 52
>UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 53
Score = 43.2 bits (97), Expect = 0.004
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 183 EWLMNQHRDSCCSYMGHPDLLSYF 254
EWL+NQHRDS +Y+GH +LL YF
Sbjct: 1 EWLVNQHRDSASAYIGHGNLLDYF 24
Score = 32.3 bits (70), Expect = 6.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 227 GSSGFVELLSIVENESKARVKFNLME 304
G ++ ++ ENE+KARV+FNL+E
Sbjct: 16 GHGNLLDYFALAENETKARVRFNLLE 41
>UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Rep:
AFR059Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 84
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
M ++ + ++ K+IG G DT++ EWL HRD+ S +GH LL Y
Sbjct: 1 MSDKIREERLFQAMKQKHIGLGTDDTSRDEWLTQVHRDTYNSLLGHSALLQY 52
>UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida
albicans IPF11714 unknown function; n=2;
Saccharomycetaceae|Rep: Similar to ca|CA1331|IPF11714
Candida albicans IPF11714 unknown function -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 85
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
M ++ +Q L+SKYIG G+AD T+ E++ N +RD S H ++L Y
Sbjct: 1 MADKVKDINQYNQLKSKYIGLGNADITREEFMTNVNRDIYSSLAQHDNILYY 52
>UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 100
Score = 37.9 bits (84), Expect = 0.13
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 236 GFVELLSIVENESKARVKFNLMERMLQPCGPPPEKPED 349
GF+ S+ + + VK NL+++M+QPCGP P P D
Sbjct: 51 GFLSYQSMGLGQPEIVVKTNLIDKMVQPCGPAPPAPVD 88
>UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
B0495.6 - Caenorhabditis elegans
Length = 87
Score = 35.5 bits (78), Expect = 0.71
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 99 GERYNIHSQLEHLQSKYIGT 158
GER+++ +QLEHLQSKY GT
Sbjct: 5 GERFHVLAQLEHLQSKYTGT 24
>UniRef50_P0C074 Cluster: RDS3 complex subunit 10; n=2;
Saccharomyces cerevisiae|Rep: RDS3 complex subunit 10 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 85
Score = 33.5 bits (73), Expect = 2.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 138 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
+ KYIG G TT+ +W N D+ + GH L Y
Sbjct: 15 KQKYIGLGDESTTREQWQRNVRNDTLNTLQGHSASLEY 52
>UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3b5 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 72
Score = 33.1 bits (72), Expect = 3.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 120 SQLEHLQSKYIGTGHADTTKYEWLMNQHRDS 212
+QL+ L KY GTG+ T++ EW+ HRD+
Sbjct: 6 NQLDFLFWKYEGTGNRRTSEKEWISQIHRDN 36
>UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5;
Trypanosomatidae|Rep: Sf3b complex subunit - Trypanosoma
cruzi
Length = 89
Score = 32.7 bits (71), Expect = 5.0
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 99 GERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSY 251
G Y H +E + + GT +++K +WL QHRD+ S + H D L Y
Sbjct: 9 GLTYQPH--IEQVLLRNEGTLTLESSKDDWLRYQHRDTLASLILHRDRLEY 57
>UniRef50_A0CM16 Cluster: Chromosome undetermined scaffold_21, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_21,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2076
Score = 32.3 bits (70), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 87 KNKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQ 200
KN + ++ + ++Q+ QSKY+G H +T K +NQ
Sbjct: 187 KNSIHQQLSYYNQIHFYQSKYLGDNHKETIKTIMRINQ 224
>UniRef50_A7RM54 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 209
Score = 31.9 bits (69), Expect = 8.7
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 52 RVYTISTSILPLKIKWVKDTTFTVNLNIY 138
++Y +T I+P+ + W+ T FT+ +N+Y
Sbjct: 81 KLYGSTTCIIPVPVTWLMGTIFTIVINVY 109
>UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 80
Score = 31.9 bits (69), Expect = 8.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 96 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLL 245
M ++ Q L+SKY G G++DTT E+ + D+ S H LL
Sbjct: 1 MADKIREKHQYALLKSKYDGIGNSDTTSKEFQTTIYNDTFASLAHHKHLL 50
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,854,412
Number of Sequences: 1657284
Number of extensions: 7632715
Number of successful extensions: 18676
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18665
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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