Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00683
         (509 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   2.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   2.6  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    24   2.6  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    24   2.6  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 252 SNSTNPDDPCNCSKSRDVG 196
           +NS NP  P NC++ R+ G
Sbjct: 30  NNSLNPRTPPNCARCRNHG 48


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 252 SNSTNPDDPCNCSKSRDVG 196
           +NS NP  P NC++ R+ G
Sbjct: 30  NNSLNPRTPPNCARCRNHG 48


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 252 SNSTNPDDPCNCSKSRDVG 196
           +NS NP  P NC++ R+ G
Sbjct: 30  NNSLNPRTPPNCARCRNHG 48


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 252 SNSTNPDDPCNCSKSRDVG 196
           +NS NP  P NC++ R+ G
Sbjct: 30  NNSLNPRTPPNCARCRNHG 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,799
Number of Sequences: 2352
Number of extensions: 9762
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)