Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00683
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023697-1|AAY85097.1|   90|Drosophila melanogaster IP03424p pro...   110   9e-25
AE014297-859|AAF54327.1|   85|Drosophila melanogaster CG11985-PA...   108   5e-24
BT029933-1|ABM92807.1|  575|Drosophila melanogaster IP14249p pro...    29   4.8  
AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-P...    29   4.8  

>BT023697-1|AAY85097.1|   90|Drosophila melanogaster IP03424p
           protein.
          Length = 90

 Score =  110 bits (265), Expect = 9e-25
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = +3

Query: 90  NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
           +KMGERYNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS  SYMGH D+L+YF
Sbjct: 4   SKMGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYF 58



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +2

Query: 227 GSSGFVELLSIVENESKARVKFNLMERMLQPCGPPPEKPED 349
           G    +   +I ENESKARV+FNLMERMLQPCGPPPEK ED
Sbjct: 50  GHYDILNYFAIAENESKARVRFNLMERMLQPCGPPPEKLED 90


>AE014297-859|AAF54327.1|   85|Drosophila melanogaster CG11985-PA
           protein.
          Length = 85

 Score =  108 bits (259), Expect = 5e-24
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = +3

Query: 96  MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYF 254
           MGERYNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS  SYMGH D+L+YF
Sbjct: 1   MGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYF 53



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +2

Query: 227 GSSGFVELLSIVENESKARVKFNLMERMLQPCGPPPEKPED 349
           G    +   +I ENESKARV+FNLMERMLQPCGPPPEK ED
Sbjct: 45  GHYDILNYFAIAENESKARVRFNLMERMLQPCGPPPEKLED 85


>BT029933-1|ABM92807.1|  575|Drosophila melanogaster IP14249p
           protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = +3

Query: 42  YKL*SLYDFNKHLAFKNKMGERYNIHSQLEHLQ 140
           + L  + D NK + +++K  E + +H+++ H++
Sbjct: 193 HSLPMILDLNKEICYQDKKAELHQVHTEIAHVE 225


>AE014134-2641|AAN10914.1| 1931|Drosophila melanogaster CG18109-PA
           protein.
          Length = 1931

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 8/33 (24%), Positives = 21/33 (63%)
 Frame = +3

Query: 42  YKL*SLYDFNKHLAFKNKMGERYNIHSQLEHLQ 140
           + L  + D NK + +++K  E + +H+++ H++
Sbjct: 193 HSLPMILDLNKEICYQDKKAELHQVHTEIAHVE 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,353,192
Number of Sequences: 53049
Number of extensions: 357489
Number of successful extensions: 850
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)