Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00683
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   5.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   7.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   9.8  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 214 QESRCWFISHSYFV 173
           +++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 317 PCGPPPEKPED*TLRF 364
           PC  PP  P++ T+ F
Sbjct: 313 PCTQPPSAPQNLTVNF 328


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 46  NFRVYTISTSILPLKIKWVKDTTFTVNLNIYRANI*AQATPTLQNMNGL 192
           +FR + +STSIL  K    ++T + + +   RA     ++ ++ + NG+
Sbjct: 398 SFREFAVSTSILGDKKTAEENTDYFMPIGRPRAKDYGHSSGSVIDRNGV 446



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -3

Query: 306 RSIKLNFTRALDSFSTIESNSTNPDDPCNCSKSR 205
           RS+   F  +L ++ T+ S+        NC  S+
Sbjct: 38  RSVSSGFRSSLRNYKTLISSHDELPGHINCDSSK 71


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -3

Query: 282 RALDSFST--IESNSTNPDDPCNCSKS 208
           R LDS S   IES +  PD P + S S
Sbjct: 572 RKLDSPSDSGIESGTEKPDKPASSSAS 598


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 61  TISTSILPLKIKWVKD 108
           +++   LPL I W+KD
Sbjct: 633 SVTRGDLPLSISWLKD 648


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/37 (24%), Positives = 14/37 (37%)
 Frame = +3

Query: 72  KHLAFKNKMGERYNIHSQLEHLQSKYIGTGHADTTKY 182
           K+    N +G R     +     S+Y  + H D   Y
Sbjct: 209 KYAISSNSLGSRSRSFQRTSSCHSRYEDSRHEDRNSY 245


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 233 SGFVELLSIVENESKARVKFNLME 304
           +GF++ L + +N   A ++  LME
Sbjct: 213 AGFIDGLGLGDNTKAAVMRLGLME 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,324
Number of Sequences: 438
Number of extensions: 2265
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)