Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00682
         (702 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5757B Cluster: PREDICTED: similar to CG6459-PA;...    72   1e-11
UniRef50_UPI00005156E4 Cluster: PREDICTED: similar to CG6459-PA;...    72   1e-11
UniRef50_Q7JXC4 Cluster: LD29590p; n=9; Endopterygota|Rep: LD295...    68   3e-10
UniRef50_UPI00005885A0 Cluster: PREDICTED: similar to Complement...    42   0.015
UniRef50_A7RVJ1 Cluster: Predicted protein; n=1; Nematostella ve...    42   0.015
UniRef50_Q21018 Cluster: Uncharacterized protein F59A2.3, mitoch...    40   0.059
UniRef50_Q07021 Cluster: Complement component 1 Q subcomponent-b...    40   0.059
UniRef50_Q5DBP9 Cluster: SJCHGC06672 protein; n=1; Schistosoma j...    36   0.73 
UniRef50_A5TVH2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  
UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, wh...    33   9.0  

>UniRef50_UPI0000D5757B Cluster: PREDICTED: similar to CG6459-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG6459-PA - Tribolium castaneum
          Length = 261

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = +3

Query: 45  MNLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKFTIGK 173
           +N LEEKGISNEFV KLSDFST+YEH+AYI LLE +SKF  GK
Sbjct: 219 LNYLEEKGISNEFVGKLSDFSTSYEHSAYIGLLEGLSKFVSGK 261


>UniRef50_UPI00005156E4 Cluster: PREDICTED: similar to CG6459-PA;
           n=2; Apocrita|Rep: PREDICTED: similar to CG6459-PA -
           Apis mellifera
          Length = 267

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +3

Query: 45  MNLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKFTIGK 173
           MN LEEKGISNEF +KL D ST+YEHTAY++LLE +SKFT GK
Sbjct: 225 MNYLEEKGISNEFAEKLIDLSTSYEHTAYVSLLEGLSKFTSGK 267


>UniRef50_Q7JXC4 Cluster: LD29590p; n=9; Endopterygota|Rep: LD29590p
           - Drosophila melanogaster (Fruit fly)
          Length = 263

 Score = 67.7 bits (158), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +3

Query: 45  MNLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKFTIG 170
           +NLLEEKGIS EF +KLSD +TA+EHT+YI LLE +SKFT G
Sbjct: 220 INLLEEKGISQEFAEKLSDLATAHEHTSYIGLLEKLSKFTAG 261


>UniRef50_UPI00005885A0 Cluster: PREDICTED: similar to Complement
           component 1, q subcomponent binding protein; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           Complement component 1, q subcomponent binding protein -
           Strongylocentrotus purpuratus
          Length = 249

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +3

Query: 48  NLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKF 161
           N L E+GI+ +F +KLSD S+A EH  YI  L  +  F
Sbjct: 209 NYLAERGINKDFCEKLSDLSSAVEHRQYIGFLNQLQGF 246


>UniRef50_A7RVJ1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 273

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 45  MNLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKF 161
           +N+L E+G+ N F   L DFSTA EH  YI  L+++  F
Sbjct: 231 LNMLAERGVDNSFGHWLLDFSTAIEHQHYIKFLKNLQGF 269


>UniRef50_Q21018 Cluster: Uncharacterized protein F59A2.3,
           mitochondrial precursor; n=2; Caenorhabditis|Rep:
           Uncharacterized protein F59A2.3, mitochondrial precursor
           - Caenorhabditis elegans
          Length = 236

 Score = 39.9 bits (89), Expect = 0.059
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 54  LEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKF 161
           LEE+G+   F + L  ++T YEH+ Y+ LL+ I KF
Sbjct: 198 LEERGLDARFCKTLVAYATHYEHSQYVGLLDKIKKF 233


>UniRef50_Q07021 Cluster: Complement component 1 Q
           subcomponent-binding protein, mitochondrial precursor;
           n=28; Euteleostomi|Rep: Complement component 1 Q
           subcomponent-binding protein, mitochondrial precursor -
           Homo sapiens (Human)
          Length = 282

 Score = 39.9 bits (89), Expect = 0.059
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 45  MNLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKF 161
           M+ L ++G+ N F  +L + STA EH  YI  LE +  F
Sbjct: 240 MDFLADRGVDNTFADELVELSTALEHQEYITFLEDLKSF 278


>UniRef50_Q5DBP9 Cluster: SJCHGC06672 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06672 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 242

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 45  MNLLEEKGISNEFVQKLSDFSTAYEHTAYINLLESISKF 161
           M LL E+G++ +F Q+L +F T+ EH  Y+  L+    +
Sbjct: 201 MQLLVERGLNADFQQELQNFCTSEEHKLYLKFLDEFQNY 239


>UniRef50_A5TVH2 Cluster: Putative uncharacterized protein; n=1;
           Fusobacterium nucleatum subsp. polymorphum ATCC
           10953|Rep: Putative uncharacterized protein -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 475

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +1

Query: 418 YKIKAKTVRVNIYLYSYIRLLTNGEKSFETLYFQTNNNYGT***SHKSPKHYLILTIIRH 597
           +K++   + +N++LY+YI  L       E+  FQ NN + +    +     Y   TII  
Sbjct: 388 FKLRFNNILINLFLYTYISFLLRFYIQIESGLFQINNEFISIKAIYFLVIIYFYKTIIYI 447

Query: 598 IKRAKHKLLLSLTN 639
           + R K+K + S  N
Sbjct: 448 LGRFKNKKIKSQIN 461


>UniRef50_A7Q5M3 Cluster: Chromosome undetermined scaffold_53, whole
            genome shotgun sequence; n=4; Vitis vinifera|Rep:
            Chromosome undetermined scaffold_53, whole genome shotgun
            sequence - Vitis vinifera (Grape)
          Length = 1341

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 79   NSCRSCQTSVLPTSTRRTSIFWSPYLNSPSENNVTSN 189
            +S +S  T  LP++ ++  I+W P L S SEN   +N
Sbjct: 1077 SSLKSFSTRELPSTLKKLEIYWCPELESMSENMCPNN 1113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,146,786
Number of Sequences: 1657284
Number of extensions: 11198989
Number of successful extensions: 23265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23252
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)