Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00682
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.60 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   3.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   3.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   3.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.6  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 48  NLLEEK-GISNEFVQKLSDFSTAYEHTAYINLLESISKFTI 167
           N+L+E   I NE  ++L +   A  H  YI+++  I++FT+
Sbjct: 137 NILQEFIQIFNEETKRLVEDLEAESHKPYIDVVVPITQFTL 177


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 48  NLLEEK-GISNEFVQKLSDFSTAYEHTAYINLLESISKFTI 167
           N+L+E   I NE  ++L +   A  H  YI+++  I++FT+
Sbjct: 137 NILQEFIQIFNEETKRLVEDLEAECHKPYIDVVVPITQFTL 177


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 232 YLVSNYIILFASSVQLKFRKSNCYRSNNSTF 324
           Y++++Y +L+ S   L  +  N Y    ST+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYSTY 252


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 232 YLVSNYIILFASSVQLKFRKSNCYRSNNSTF 324
           Y++++Y +L+ S   L  +  N Y    ST+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYSTY 252


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 232 YLVSNYIILFASSVQLKFRKSNCYRSNNSTF 324
           Y++++Y +L+ S   L  +  N Y    ST+
Sbjct: 222 YIIAHYRVLWLSLSDLLQKMGNAYARTYSTY 252


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 464 LYKYIFTRTVFALILYVSLYLVTIVDRRLKINKC 363
           LY+   T+T   LI  ++L+ + +  ++L+ + C
Sbjct: 314 LYRIPVTKTDSMLIRNINLFSLQLAHQKLEFSAC 347


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 464 LYKYIFTRTVFALILYVSLYLVTIVDRRLKINKC 363
           LY+   T+T   LI  ++L+ + +  ++L+ + C
Sbjct: 139 LYRIPVTKTDSMLIRNINLFSLQLAHQKLEFSAC 172


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 238 VSNYIILFASSVQLKFRKSNCYRSNNST 321
           V+ Y+++F    Q    ++N   +NNST
Sbjct: 374 VTTYLVIFIQFDQSSNSRNNYVLTNNST 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,354
Number of Sequences: 336
Number of extensions: 3404
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)