Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00682
         (702 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0532 + 18386593-18386722,18386826-18386900,18387098-183875...    29   2.7  
03_06_0653 - 35305279-35306163                                         29   3.6  

>09_04_0532 +
           18386593-18386722,18386826-18386900,18387098-18387510,
           18387682-18387688,18387944-18388005,18388046-18388341,
           18388456-18388813,18388916-18389491,18389956-18390231
          Length = 730

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 550 SHKSPKHYLILTIIRHIKRAKHKLLLSLTNKKTYFNTFNVK 672
           SHK   +YL     + + +  H L L LTN+  Y N+ N K
Sbjct: 370 SHKKETNYLAQVAAKSLPKGLHCLPLRLTNEYYYTNSNNKK 410


>03_06_0653 - 35305279-35306163
          Length = 294

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = +1

Query: 58  KKRA*AMNSCRSCQTSVLPTSTRRTSIFWSPYLNSPSENNVTS 186
           KKR  A      C+TS  P +TRRT   W P L S  E   +S
Sbjct: 249 KKRNSAAVPSTGCRTSRAPATTRRT---WEPSLPSVEEERESS 288


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,266,221
Number of Sequences: 37544
Number of extensions: 269331
Number of successful extensions: 501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)