Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00681
(379 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 53 2e-06
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 42 0.005
UniRef50_A7QZL4 Cluster: Chromosome undetermined scaffold_278, w... 33 1.8
UniRef50_Q6CKB4 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 32 4.1
UniRef50_Q9GRH4 Cluster: CDC2L5 protein kinase; n=4; Eukaryota|R... 31 5.4
UniRef50_UPI00015B42FD Cluster: PREDICTED: similar to ENSANGP000... 31 7.1
UniRef50_A7AF87 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 31 7.1
UniRef50_Q7SBP1 Cluster: Predicted protein; n=1; Neurospora cras... 31 7.1
UniRef50_A2QIK4 Cluster: Similarity to microtubule binding prote... 31 7.1
UniRef50_Q14VU5 Cluster: ORF13; n=1; Ranid herpesvirus 1|Rep: OR... 31 9.4
UniRef50_Q82MN1 Cluster: Putative uncharacterized protein; n=2; ... 31 9.4
UniRef50_O53689 Cluster: POSSIBLE CONSERVED MEMBRANE PROTEIN; n=... 31 9.4
UniRef50_A7QEJ5 Cluster: Chromosome chr17 scaffold_85, whole gen... 31 9.4
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 53.2 bits (122), Expect = 2e-06
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = +2
Query: 62 RRRPKHVITDPPDPLTVLLGTTSTGHSPRRTRRLREGLDERINLQTQLTEFLVGSSQWVA 241
RR P HV++DP D L+VLL +STG+ P R RR N +TQ +FL GSSQ
Sbjct: 34 RRHPNHVLSDPRDSLSVLLDLSSTGYCPCRVRR-------ATNPKTQPMKFLAGSSQSSR 86
Query: 242 CPIRCRFCE 268
RFCE
Sbjct: 87 FRSDGRFCE 95
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 6/42 (14%)
Frame = +2
Query: 62 RRRPKHVITDPPDPLTVLLGTTSTG-----HSP-RRTRRLRE 169
RRRP+HV+TDP DP+T+ L T S+ SP RTRR R+
Sbjct: 913 RRRPRHVLTDPSDPITLALDTFSSNTRSRLRSPGNRTRRTRQ 954
>UniRef50_A7QZL4 Cluster: Chromosome undetermined scaffold_278,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_278, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 253
Score = 33.1 bits (72), Expect = 1.8
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 86 TDPPDPLTVLLGTTSTGHSPRRTRRLREGLDERINLQTQLTEFLVGSS 229
+D PD LT++L T PR R LR GL R+ + Q E S+
Sbjct: 49 SDDPDRLTLVLVTGPPSKKPRSVRNLRSGLHGRLQERQQEIEVSCSSA 96
>UniRef50_Q6CKB4 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 746
Score = 31.9 bits (69), Expect = 4.1
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 56 IRRRRPKHVITDP--PDPLTVL--LGTTSTGHSPRRTRRLREGLDERINLQTQLTEFLVG 223
+ ++ PKH++ DP P P +L +G + G P R + +ER + L F G
Sbjct: 81 VSKQHPKHLLVDPIMPPPPIMLSPIGHETLGKKPTRKNGNKSWKNERCCICGDLCSF-KG 139
Query: 224 SSQWVACPIRCRFCEHCSC 280
S++ V P+ C H C
Sbjct: 140 SNEKV-IPLECNHMCHEDC 157
>UniRef50_Q9GRH4 Cluster: CDC2L5 protein kinase; n=4; Eukaryota|Rep:
CDC2L5 protein kinase - Sphaerechinus granularis (Purple
sea urchin)
Length = 1266
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 58 SSTSPKTRHYGSSRSINGA-FRYHKHRSQSSPNPSLARRARRAN*PT 195
S T + RH SRS +G+ +R KH SP+P R +RA P+
Sbjct: 221 SKTKSRKRHQKVSRSPSGSPYRRPKHSPSRSPSPPPYRGRKRARSPS 267
>UniRef50_UPI00015B42FD Cluster: PREDICTED: similar to
ENSANGP00000023698; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000023698 - Nasonia
vitripennis
Length = 1192
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 49 LMNSSTSPKTRHYGSSRSINGAFRYHKHRSQSSPNPSLARR 171
+ N++TS + H+ SS S N KH +SSP+ S RR
Sbjct: 740 IKNTNTSGSSSHHHSSSSSNHESSKRKHGEKSSPSSSEHRR 780
>UniRef50_A7AF87 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 260
Score = 31.1 bits (67), Expect = 7.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 188 NLQTQLTEFLVGSSQWVACPIRCRFC 265
NL ++ +++G S CP+RC+FC
Sbjct: 51 NLGSRSERWMIGVSTMSGCPVRCKFC 76
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 31.1 bits (67), Expect = 7.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 62 RRRPKHVITDPPDPLTVL 115
RRRP+H+ DPPD +T +
Sbjct: 122 RRRPRHIFIDPPDEITAV 139
>UniRef50_Q7SBP1 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 721
Score = 31.1 bits (67), Expect = 7.1
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 34 VTSVLLMNSSTSPKTRHYGSSRSINGAFRYHKHRSQSSPNPSLARRARRA 183
+TS L + + P G SR+IN R+H H +P S ARRARRA
Sbjct: 358 LTSDLEDSDAEPPALPRAGGSRAINNR-RHHHH----NPGASAARRARRA 402
>UniRef50_A2QIK4 Cluster: Similarity to microtubule binding protein
D-CLIP-190 - Drosophila melanogaster; n=1; Aspergillus
niger|Rep: Similarity to microtubule binding protein
D-CLIP-190 - Drosophila melanogaster - Aspergillus niger
Length = 433
Score = 31.1 bits (67), Expect = 7.1
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 161 LREGLDERINLQTQLTEFLVGSSQWVACPIRCRFCEHCSC 280
LRE ++E NLQ QLTE S + C I+ E SC
Sbjct: 366 LREAVEEISNLQAQLTEIHEQQSTTIWCKIKRWIREKASC 405
>UniRef50_Q14VU5 Cluster: ORF13; n=1; Ranid herpesvirus 1|Rep: ORF13 -
Ranid herpesvirus 1 (Lucke tumor herpesvirus)
Length = 3149
Score = 30.7 bits (66), Expect = 9.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 58 SSTSPKTRHYGSSRSINGAFRYHKHRSQSSPNPSLARRARRAN 186
SS SP G SRS +G+ R RS +SP+ + R+R ++
Sbjct: 1046 SSASPLGGGRGRSRSSSGSSRAESRRSSASPHRMVCERSRSSS 1088
>UniRef50_Q82MN1 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 193
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 89 DPPDPLTVLLGTTSTGHSPRRTRRLRE-GLDER 184
DPP P+ LL T +P R RRLR GL ER
Sbjct: 4 DPPRPIGRLLLTPEDKDAPERVRRLRRLGLGER 36
>UniRef50_O53689 Cluster: POSSIBLE CONSERVED MEMBRANE PROTEIN; n=17;
Mycobacterium|Rep: POSSIBLE CONSERVED MEMBRANE PROTEIN -
Mycobacterium tuberculosis
Length = 1330
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 89 DPPDPLTVLLGTTSTGHSPRRTRRLREGLDERINLQTQLTEFLVGSSQW 235
DPP L +G + PR + LDE I L L VG QW
Sbjct: 748 DPPRKLIATIGEQLARYGPRAPQLWLPPLDETIPLSAALARAGVGPRQW 796
>UniRef50_A7QEJ5 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 737
Score = 30.7 bits (66), Expect = 9.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 86 TDPPDPLTVLLGTTSTGHSPRRTRRLREGLDERINLQTQLTE 211
+D PD L ++L PR R LR GLD R+ + Q E
Sbjct: 248 SDDPDRLALVLVKGPPSKRPRSVRNLRSGLDGRLQERQQEIE 289
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,190,336
Number of Sequences: 1657284
Number of extensions: 5745662
Number of successful extensions: 17386
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17379
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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