Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00681
         (379 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   0.92 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   2.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   2.8  
Y17701-1|CAA76821.1|   81|Anopheles gambiae apyrase protein.           22   8.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   8.6  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    22   8.6  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         22   8.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   8.6  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +2

Query: 104 LTVLLGTTSTGHSPRRTRRLREGLDERINLQTQLTEFLVGSSQWV 238
           + ++LG  S   S  RT+    G  +++  + Q+ E L G   W+
Sbjct: 372 MNLILGVLSGEFSKERTKAKNRGDFQKLREKQQIEEDLRGYLDWI 416


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -3

Query: 149 GEDCDRCL-WYLKAP 108
           G DCDRCL +Y  AP
Sbjct: 313 GPDCDRCLPFYNDAP 327


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 4   HEDARMLRF*V-TSVLLMNSSTSPKTRHYGSSRSINGAFR 120
           + D R + + V T V ++N  +SP+ RH G  R  +  ++
Sbjct: 198 YSDHRYITYTVGTIVPVVNEPSSPRMRHQGRIRHADRRYK 237


>Y17701-1|CAA76821.1|   81|Anopheles gambiae apyrase protein.
          Length = 81

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 215 LVGSSQWVACPIRCRFCEH 271
           L+G+  WVA   RC   +H
Sbjct: 7   LIGTLAWVASMQRCSATDH 25


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 265  AESTPDRTRDPLRRSDEKLSELC 197
            ++S PDRT       ++ L ELC
Sbjct: 1036 SDSGPDRTEPDTLLDEQCLEELC 1058


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 215 LVGSSQWVACPIRCRFCEH 271
           L+G+  WVA   RC   +H
Sbjct: 7   LIGTLAWVASMQRCSATDH 25


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 215 LVGSSQWVACPIRCRFCEH 271
           L+G+  WVA   RC   +H
Sbjct: 7   LIGTLAWVASMQRCSATDH 25


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 82  HYGSSRSINGAFRYHKHRSQSSPNP 156
           H     S +G FR H HR    P+P
Sbjct: 893 HMSQFLSGHGFFRSHLHRMGYVPSP 917


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,727
Number of Sequences: 2352
Number of extensions: 6248
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)