Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00680
(719 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 291 9e-78
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 270 3e-71
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 202 9e-51
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 153 4e-36
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 145 8e-34
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 111 1e-23
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 111 1e-23
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 110 3e-23
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 109 5e-23
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 105 8e-22
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 100 7e-20
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 98 2e-19
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 97 5e-19
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 90 4e-17
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 90 6e-17
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 89 1e-16
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 85 1e-15
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 84 4e-15
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 73 9e-12
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 72 1e-11
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 71 3e-11
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 68 2e-10
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 66 6e-10
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 65 2e-09
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 64 3e-09
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 62 1e-08
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 61 2e-08
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 58 2e-07
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 57 5e-07
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 54 3e-06
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 54 5e-06
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 52 1e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 3e-05
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 50 6e-05
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 50 8e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 50 8e-05
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 50 8e-05
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 49 1e-04
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 48 2e-04
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 48 2e-04
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 48 3e-04
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 46 7e-04
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 0.001
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.002
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.004
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.005
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 43 0.009
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.009
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 42 0.012
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.015
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.020
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.020
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 41 0.027
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 41 0.035
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 41 0.035
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.047
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 40 0.062
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 40 0.082
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.082
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 39 0.11
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.14
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.14
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.14
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 38 0.19
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 38 0.19
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.19
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 38 0.19
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.25
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.25
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.25
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.44
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.76
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.76
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 36 1.0
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 1.0
UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|R... 35 1.8
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 35 2.3
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 34 3.1
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 3.1
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 3.1
UniRef50_Q08ZV6 Cluster: Major royal jelly protein; n=1; Stigmat... 34 4.1
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_UPI0000DD7B39 Cluster: PREDICTED: hypothetical protein;... 33 5.4
UniRef50_A1SQS0 Cluster: Putative uncharacterized protein precur... 33 5.4
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_Q0W1B8 Cluster: Archaeal specific fructose-1,6-bisphosp... 33 7.1
UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1; Stre... 33 9.4
UniRef50_Q1N8M6 Cluster: Extracellular solute-binding protein, f... 33 9.4
UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1; Rh... 33 9.4
UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga br... 33 9.4
UniRef50_A6R0K7 Cluster: Predicted protein; n=2; Pezizomycotina|... 33 9.4
UniRef50_Q9YEB8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 291 bits (715), Expect = 9e-78
Identities = 134/168 (79%), Positives = 150/168 (89%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+RAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFR
Sbjct: 5 IRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFR 64
Query: 189 DPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
DPY++K RKELFIAPE +H VYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRG
Sbjct: 65 DPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRG 124
Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
RLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGG
Sbjct: 125 RLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGG 172
Score = 150 bits (363), Expect = 4e-35
Identities = 68/70 (97%), Positives = 68/70 (97%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG
Sbjct: 173 GRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 232
Query: 689 RKVGLIAARR 718
RKVGLIAARR
Sbjct: 233 RKVGLIAARR 242
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 270 bits (661), Expect = 3e-71
Identities = 124/168 (73%), Positives = 144/168 (85%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+R QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 5 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 64
Query: 189 DPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
DPY+FK R ELFIA E +H VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG
Sbjct: 65 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRG 124
Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGG
Sbjct: 125 KLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGG 172
Score = 138 bits (334), Expect = 1e-31
Identities = 61/70 (87%), Positives = 63/70 (90%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AG
Sbjct: 173 GRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAG 232
Query: 689 RKVGLIAARR 718
RKVGLIAARR
Sbjct: 233 RKVGLIAARR 242
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 202 bits (492), Expect = 9e-51
Identities = 101/168 (60%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+R+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA V FR
Sbjct: 5 IRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKVTFR 64
Query: 189 DPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
DPYK+K R E FIA E ++ +YCGKKA L++ RG
Sbjct: 65 DPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI------------------------RG 100
Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGG
Sbjct: 101 KLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGG 148
Score = 147 bits (356), Expect = 3e-34
Identities = 65/70 (92%), Positives = 67/70 (95%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTV+R TSAG
Sbjct: 149 GRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDTSAG 208
Query: 689 RKVGLIAARR 718
RKVGLIAARR
Sbjct: 209 RKVGLIAARR 218
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 153 bits (371), Expect = 4e-36
Identities = 70/114 (61%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
Frame = +3
Query: 120 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNV 296
+G+VK I HDPGRGAPLA V FR+P ++ KELFI E L+ +YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 297 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 458
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 145 bits (352), Expect = 8e-34
Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+RAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR
Sbjct: 5 IRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFR 64
Query: 189 DPYKFKTRKELFIAPEALHRPI--VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 362
P++FK +KELF+ E P+ +YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 65 HPFRFKKQKELFVXXEVC-TPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 111 bits (268), Expect = 1e-23
Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+ AQRKG + +R G +S+ E++ IKG++ D + P + F
Sbjct: 31 ISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIKIKFN 90
Query: 189 DPYKFKTRKELFIAPEALH-RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
FK EL+IA E L+ + CG +A GNV+P+ +P G VCN+EEK GD G
Sbjct: 91 VTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGG 150
Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
+LAR++G F V+ H+ T++KLPS K+L S R +G+VAGG
Sbjct: 151 KLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGG 198
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
G+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV R + G
Sbjct: 199 GKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTVSRRSPPG 258
Query: 689 RKVGLIAARR 718
+KVGLIAARR
Sbjct: 259 QKVGLIAARR 268
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 111 bits (268), Expect = 1e-23
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Frame = +3
Query: 6 RVRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R+ QR+G GS F S + KR G + L GY V DI+H+PG AP+A +
Sbjct: 4 RILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVAKIV 59
Query: 183 FRDPYKFKTRKELFIAPEALH-RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
+ +F A E L+ +V GK A+ + GN+M +G +PEGT++ N+E++ GD
Sbjct: 60 TENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGD 114
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGDVLTNLF*K 536
G+ ARA G +A VIG P+ +T ++LPSG + S R VGIVAGG + F K
Sbjct: 115 GGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLK 173
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G + V + G
Sbjct: 165 GRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPG 222
Query: 689 RKVGLIAAR 715
+KVG I +R
Sbjct: 223 QKVGFIGSR 231
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 110 bits (265), Expect = 3e-23
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 2/170 (1%)
Frame = +3
Query: 6 RVRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R+R QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A V
Sbjct: 4 RIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVARVR 63
Query: 183 FRDPYKFKTRKELFIAPEALH-RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
F D + L + PE I+ CG A ++ GN +P+ +PEG + N+E + GD
Sbjct: 64 FEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGD 118
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
G+ ARA G +AT+I H D RT V+LPSG + R +G+++GG
Sbjct: 119 GGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGG 166
Score = 89.8 bits (213), Expect = 6e-17
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
G+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK +T+ RG G
Sbjct: 167 GKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPG 226
Query: 689 RKVGLIAARR 718
RKVG IAAR+
Sbjct: 227 RKVGHIAARK 236
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 109 bits (263), Expect = 5e-23
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+R+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 189 DPYKFKTRK 215
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 105 bits (253), Expect = 8e-22
Identities = 49/70 (70%), Positives = 54/70 (77%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+ STV R G
Sbjct: 163 GRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPG 222
Query: 689 RKVGLIAARR 718
RKVG IAARR
Sbjct: 223 RKVGHIAARR 232
Score = 97.9 bits (233), Expect = 2e-19
Identities = 64/169 (37%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Frame = +3
Query: 6 RVRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R+R QR G G+ + S G K L ++G V ++IHDPGR PLA V
Sbjct: 4 RLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLARVV 59
Query: 183 FRDPYKFKTRKELFIAPEALH-RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
D +F L A E ++ I+ G A E GN++P+G +PEGT V N+E + GD
Sbjct: 60 REDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGD 114
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAG 506
G+LAR +G++A V+G +T ++LPSG K +P+ +R +GI AG
Sbjct: 115 GGKLARQAGSYALVVGR--AGAKTILRLPSGKDKEVPNDSRATIGIPAG 161
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 99.5 bits (237), Expect = 7e-20
Identities = 57/137 (41%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = +3
Query: 102 ERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI-APEALH-RPIVYCGKKA 275
+ + ++G V I HDP R AP+A V F+ +ELF+ A E + I+ CG A
Sbjct: 34 DENSSLRGEVVGIEHDPARSAPIAKV------AFENGEELFLLASEGIAVGNIIECGDDA 87
Query: 276 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 455
++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A RT V +PSG
Sbjct: 88 EVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGN 145
Query: 456 KKVLPSSNRGMVGIVAG 506
K L R +VGIVAG
Sbjct: 146 IKWLNPKCRAVVGIVAG 162
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/70 (58%), Positives = 49/70 (70%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H GK +TV R G
Sbjct: 164 GRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPG 223
Query: 689 RKVGLIAARR 718
RKVGLIAARR
Sbjct: 224 RKVGLIAARR 233
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 98.3 bits (234), Expect = 2e-19
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
G +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + + STV R G
Sbjct: 162 GVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPG 221
Query: 689 RKVGLIAARR 718
RKVG IAARR
Sbjct: 222 RKVGHIAARR 231
Score = 95.1 bits (226), Expect = 2e-18
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 3/169 (1%)
Frame = +3
Query: 18 QRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 194
QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA++ D
Sbjct: 8 QRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDG 62
Query: 195 YKF--KTRKELFIAPEALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 368
KF + + L + + + GK A + GN++ VG +PEGTI+ N+E+ GD G+
Sbjct: 63 TKFYVPSVQGLVVGQK------IQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGK 116
Query: 369 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGDV 515
AR++G + V+G D + VKL S + S+ R +VG+VAGG V
Sbjct: 117 FARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGV 163
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/69 (63%), Positives = 50/69 (72%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G +TV R G
Sbjct: 167 GRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPG 226
Query: 689 RKVGLIAAR 715
+KVG IAAR
Sbjct: 227 QKVGHIAAR 235
Score = 76.2 bits (179), Expect = 8e-13
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
Frame = +3
Query: 6 RVRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R+R QR G G+ + + AP + S + + +G V ++ HDPGR PLA +
Sbjct: 4 RLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLAHIV 63
Query: 183 FRDPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
+ F A E ++ V G A GN++P+ A+PEGT + N+E + GD
Sbjct: 64 IPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGD 118
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAG 506
G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI AG
Sbjct: 119 GGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAG 165
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 90.2 bits (214), Expect = 4e-17
Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +2
Query: 518 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV-KRGTSAGRK 694
DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK +TV K+ S +K
Sbjct: 162 DKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQK 221
Query: 695 VGLIAARR 718
+GL+ ARR
Sbjct: 222 IGLVGARR 229
Score = 85.8 bits (203), Expect = 9e-16
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = +3
Query: 57 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 233
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ E
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKEDDCMVPASEGMYTG 71
Query: 234 EALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 413
+ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 72 QK-----ILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHR 126
Query: 414 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGDV 515
+ T +K+PSG K + S R +VG+VAGG +
Sbjct: 127 KETNETVIKIPSGKKLTVSSECRCIVGVVAGGGI 160
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 89.8 bits (213), Expect = 6e-17
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
VR + +G + T K +E+H +G + D++H+ GR APLA V F
Sbjct: 7 VRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPLAKVRFE 63
Query: 189 DPYKFKTRKELFIAPEALHRPI---VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
D + P L + + G K+ +E GNV+ + +P+GTIVCN+E+ GD
Sbjct: 64 DG-------SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGD 116
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
G + +++G ATV H + VKLPSG L NR M+G +AGG
Sbjct: 117 GGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAGG 164
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
G ++P + AG + +K K +P VRGVA HPHGGG HQH+G++STV R T G
Sbjct: 165 GASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPG 224
Query: 689 RKVGLIAARR 718
KVG IAAR+
Sbjct: 225 AKVGSIAARK 234
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 89.0 bits (211), Expect = 1e-16
Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 6 RVRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R+ QR+G GS F S T + G K+ + D G + ++KD IH APL VV
Sbjct: 5 RLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APLMVVK 60
Query: 183 FRDPYKFKTRKELFIAPEALH-RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
+ + + L AP + VY GK+A +G++ P+ +PEGT + LE GD
Sbjct: 61 WENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGD 115
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++AGG
Sbjct: 116 GGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGG 163
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/70 (42%), Positives = 38/70 (54%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GR +KP +KAG Y+ + WP V GV N +HP GG H + K TV + G
Sbjct: 164 GRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAPPG 223
Query: 689 RKVGLIAARR 718
RKVG I AR+
Sbjct: 224 RKVGYIGARK 233
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 85.4 bits (202), Expect = 1e-15
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Frame = +3
Query: 6 RVRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R +R+G G + F + T + K + + E+ +G V D++H+ GR APLA +
Sbjct: 4 RPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLAKIR 60
Query: 183 FRDPYKFKTRKELFIAPEALHRPI---VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 353
F D + P L + + G K+ + GNV+ V +P+GT VCN+E+
Sbjct: 61 FEDGI-------VSYVPAVLGTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHY 113
Query: 354 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGDVLTNLF* 533
GD G + +++G ATV H +KLPSG L NR MVG +AGG V F
Sbjct: 114 GDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFM 171
Query: 534 KLEGHTTSTRS 566
G RS
Sbjct: 172 SAGGKWRRFRS 182
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
G ++P + AG + +++ K +P VRGVA HPHGGG HQH+G++STV R G
Sbjct: 164 GVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPG 223
Query: 689 RKVGLIAARR 718
KVG IAAR+
Sbjct: 224 AKVGSIAARK 233
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 83.8 bits (198), Expect = 4e-15
Identities = 42/71 (59%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 685
G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+ STV R
Sbjct: 158 GIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPP 216
Query: 686 GRKVGLIAARR 718
GRKVG ++ +R
Sbjct: 217 GRKVGRLSPKR 227
Score = 70.9 bits (166), Expect = 3e-11
Identities = 47/147 (31%), Positives = 67/147 (45%)
Frame = +3
Query: 126 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPV 305
VVKDIIH PGR +PL + D K + F + + G T+ G +
Sbjct: 37 VVKDIIHAPGRNSPL--LELVDSTGKKVYQIAFTGAYVGQK--IVAGNVDTINPGTTTVL 92
Query: 306 GAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRG 485
+P+G+ V N+E GD G R++G FA V+ H R +KLPSG+ + R
Sbjct: 93 ANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMRDFDPRCRA 149
Query: 486 MVGIVAGGDVLTNLF*KLEGHTTSTRS 566
VG+VA ++ K H RS
Sbjct: 150 TVGVVAASGIIDAPILKAGTHVHYLRS 176
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 72.5 bits (170), Expect = 9e-12
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Frame = +3
Query: 12 RAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 191
+A R G + H K K R +D+ + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 192 PYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 371
K R LF + IV + A ++VGN P+ +PEGT++ N+E K G G++
Sbjct: 100 GEK---RYILFAKGMTVGMKIV-ASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQM 155
Query: 372 ARASGNFATVIGHNPDAKRTRVKLPSG-AKKVL 467
AR++G ++G + D K ++L SG +KVL
Sbjct: 156 ARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVL 188
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +2
Query: 560 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTV 667
K RN W P VRG MNP +HPHGGG IG+ S V
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV 250
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 72.1 bits (169), Expect = 1e-11
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Frame = +3
Query: 15 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 189 DPYKFKTRKELFIAPEALHRPI-VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
D K +AP+ L + V G +A ++VGN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 500
+LAR++G A ++G + K V+L SG +++ ++R +G V
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV 195
Score = 36.3 bits (80), Expect = 0.76
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 533 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 634
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 134
+R QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 5 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 68.1 bits (159), Expect = 2e-10
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Frame = +3
Query: 24 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 197
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 198 KFKTRKELFIAPE-ALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 374
K + P A+ + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 375 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 500
RA+G A +I + K +KLPSG +++ + VG V
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQV 193
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 575 CW----PYVRGVAMNPVEHPHGGG 634
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 66.5 bits (155), Expect = 6e-10
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +3
Query: 84 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALH-RPIVY 260
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 261 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 440
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 441 LPSGAKKVLPSSNRGMVGIVAGGD 512
L SG ++++ + VG V+ D
Sbjct: 176 LNSGEQRLVSGACFASVGAVSNPD 199
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 533 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 652
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 64.9 bits (151), Expect = 2e-09
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
Frame = +3
Query: 6 RVRAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V
Sbjct: 63 RKRGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD 120
Query: 183 FRDPYKFKTRKELFIAPE-ALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 359
Y+ +AP + + G ++ ++VGN +P+ +P T + N+E G
Sbjct: 121 ----YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGR 176
Query: 360 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 503
G+L R++G+ AT++ D V+LPSG ++++ + +G+++
Sbjct: 177 GGQLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLVLENCMATIGMLS 224
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -2
Query: 715 ASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPSS 536
ASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV+ +
Sbjct: 18 ASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTAG 77
Query: 535 FQNRFVNTS 509
QN VN +
Sbjct: 78 LQNGLVNAA 86
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 62.5 bits (145), Expect = 1e-08
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Frame = +3
Query: 6 RVRAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
R + + + G++ H + G KL R +D+ + V I +DP R A + ++H
Sbjct: 54 RAKGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLH 111
Query: 183 FRDPYKFKTRKELFIAPEALH-----RPIVY----CGKK-ATLEVGNVMPVGAMPEGTIV 332
+ D K I PE L I + GK ++ GN MP+ +PEGTIV
Sbjct: 112 YAD-----GEKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIV 166
Query: 333 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 500
N+E G G++ARA+G +A V+G + V++PSG +++ VG V
Sbjct: 167 HNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV 222
Score = 41.9 bits (94), Expect = 0.015
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGK 655
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 61.3 bits (142), Expect = 2e-08
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Frame = +3
Query: 21 RKGAGSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 197
R G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 198 KFKTRKELFIAPEALH--RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 371
K I+P+ + I+ ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 372 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGD 512
AR++G++A ++G + K ++L SG + R VG+V+ D
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSGETRKFLKECRATVGVVSNLD 207
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +2
Query: 533 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 634
KAGR H R P VRG AMNP +HPHGGG
Sbjct: 215 KAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +3
Query: 285 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 464
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 465 LPSSNRGMVGIVA 503
+ S R +GIV+
Sbjct: 419 IDSRCRATIGIVS 431
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 667
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 453 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 56.8 bits (131), Expect = 5e-07
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Frame = +3
Query: 6 RVRAQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 179
+ + R +G V V H R G K +R +D+A R VV+ I HDPGR A +A+V
Sbjct: 103 QAKGGRNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALV 158
Query: 180 HFRDPYKFK-------------TRKELFIAPEALHRPI---VYCGKKA--TLEVGNVMPV 305
++ K + PE L + + V G A T GN +P+
Sbjct: 159 RSQETKKLSYILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPL 218
Query: 306 GAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRG 485
MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 219 HMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCA 278
Query: 486 MVGIVA 503
VG+ +
Sbjct: 279 TVGVAS 284
Score = 37.9 bits (84), Expect = 0.25
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 572 NCWPYVRGVAMNPVEHPHGGGNHQHIG 652
N P VRG+AMN EHPHGGG + G
Sbjct: 303 NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +3
Query: 279 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 458
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 459 KVLPSSNRGMVGIVA 503
+ + + +G+V+
Sbjct: 272 RYVHMNCHATLGVVS 286
Score = 40.3 bits (90), Expect = 0.047
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 533 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 634
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 285 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 464
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 465 LPSSNRGMVGIVA 503
+ S R VGIV+
Sbjct: 381 IDSRCRATVGIVS 393
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 667
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 415 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +3
Query: 282 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 461
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 462 VLPSSNRGMVGIVA 503
+ S +GIV+
Sbjct: 353 AVDSRCHATIGIVS 366
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAARR 718
P VRGVAMNPV+HPHGGG + G +V + T AG + +A+R+
Sbjct: 388 PVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRSPSVASRK 436
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +3
Query: 282 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 461
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 462 VLPSSNRGMVGIVA 503
++ S R +GIV+
Sbjct: 417 LIDSRCRATIGIVS 430
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAARR 718
P VRGVAMNPV+HPHGGG + G +V + T AG + G+ +R
Sbjct: 452 PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGVGVGKR 500
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 50.0 bits (114), Expect = 6e-05
Identities = 45/169 (26%), Positives = 77/169 (45%)
Frame = +3
Query: 24 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 203
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK- 75
Query: 204 KTRKELFIAPEALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 383
R + + +V K +L GN + + GT++ +E G +R+S
Sbjct: 76 --RYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSRSS 133
Query: 384 GNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGDVLTNLF 530
G+ + +I D K +KLPSG KK + + +G + +V L+
Sbjct: 134 GSESEII--FKDNKFGVIKLPSGIKKKISLNCMATIGKICTFNVKKKLY 180
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 557 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 652
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 49.6 bits (113), Expect = 8e-05
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Frame = +3
Query: 6 RVRAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVH 182
+ A R G + + H + A +L R +D+ +R+ + G V+ I +DP R + +A+V
Sbjct: 20 KASAGRNSTGRITLFH--RGSHAKRLQRRIDF-QRNTSLTGKVERIEYDPNRSSWIALVR 76
Query: 183 F----RDPYK--FKTRKELFIAPEALHR--PI---VYCGKKATLEVGNVMPVGAMPEGTI 329
+ P TR +A + P+ V+ +GN + + +P GT+
Sbjct: 77 WYSGSTQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTL 136
Query: 330 VCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 503
+ N+E G + RA+G FA +I R++LPSGA + S R +GIV+
Sbjct: 137 IHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALASINSQCRATIGIVS 192
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 667
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 214 PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 49.6 bits (113), Expect = 8e-05
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GHNPDAKRT 431
V G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN K
Sbjct: 210 VSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN---KYA 266
Query: 432 RVKLPSGAKKVLPSSNRGMVGIVA 503
++LPSG K P +GIV+
Sbjct: 267 ILRLPSGELKSFPLQCMATIGIVS 290
Score = 41.9 bits (94), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 667
P VRGVAMNP++HPHGGG + G +V
Sbjct: 312 PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 49.6 bits (113), Expect = 8e-05
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +3
Query: 54 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 227
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG-----ERRYIV 111
Query: 228 APEALHRPI-VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 404
AP L + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLV 171
Query: 405 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGD 512
+ + +++ SG + + + + +G V+ +
Sbjct: 172 A--KEGEYATLRMRSGEMRKVLADCKATIGEVSNNE 205
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +2
Query: 569 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 652
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 285 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 464
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 465 LPSSNRGMVGIVA 503
+ + R +G V+
Sbjct: 73 INAKCRATIGTVS 85
Score = 40.7 bits (91), Expect = 0.035
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +2
Query: 557 YKVKRNCW----PYVRGVAMNPVEHPHGGG 634
YK ++ W P VRGVAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 48.4 bits (110), Expect = 2e-04
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Frame = +3
Query: 21 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 194
R+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 195 YKFKTRKELFIAPEALH-RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 371
K PE + + G A VGN P MP GT++ +E G G+
Sbjct: 100 -----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQS 154
Query: 372 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 494
ARA+G A + + +R LP G + +P + +VG
Sbjct: 155 ARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPAVVG 193
Score = 39.9 bits (89), Expect = 0.062
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGG 634
P VRGV MNPV+HPHGGG
Sbjct: 218 PRVRGVVMNPVDHPHGGG 235
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/108 (31%), Positives = 52/108 (48%)
Frame = +3
Query: 126 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPV 305
+V +I+HD R A +A+V D K+ E A + L V G+ P+
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNEGDAYPL 169
Query: 306 GAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 449
GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 170 GALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +3
Query: 276 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 455
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 456 KKVLPSSNRGMVGIVAGGD 512
+ + +G+V+ D
Sbjct: 294 HRYVSLEAVATIGVVSNID 312
Score = 36.3 bits (80), Expect = 0.76
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGG 634
P VRGVAMN +HPHGGG
Sbjct: 331 PTVRGVAMNKCDHPHGGG 348
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = -1
Query: 365 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINNW-PV*SFGSNEELLPCLELVWI 189
T++TH + +AHNGTL S R +I+N + L+TI+ V + G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 188 AEVYNSQRCTSTRVMDYILNNSLDVSMTFSVI 93
AE +S+ + ++D + +++L+V++ + +
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAIPLAEV 98
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 46.4 bits (105), Expect = 7e-04
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Frame = +3
Query: 21 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 194
R G V V H R G K +R +D+A R +V+ I HDPGR A +A+V ++
Sbjct: 107 RNNTGRVTVRH---RGGGHKRRIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQET 162
Query: 195 YKFK-------------TRKELFIAPEALHRPI---VYCGKKA--TLEVGNVMPVGAMPE 320
K + + PE L + + V G A T GN +P+ +P
Sbjct: 163 QKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPV 222
Query: 321 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 425
GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 223 GTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 572 NCWPYVRGVAMNPVEHPHGGGNHQHIG 652
N P VRG+AMN +HPHGGG + G
Sbjct: 334 NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 554 KYKVKRNCWPYVRGVAM-NPVEHPHGG 631
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 682
P VRGVAMNPV+HPHGGG + KAS + S
Sbjct: 222 PTVRGVAMNPVDHPHGGGEGKKSKKASPTNKWAS 255
Score = 33.5 bits (73), Expect = 5.4
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Frame = +3
Query: 21 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP- 194
R G + V H K +G KL R +D+ I VV+ + +DP R + +V++++
Sbjct: 41 RDNQGHITVYH--KERGHKKLYRLVDFYYLKD-IPYVVESLEYDPNRSGFINLVYYKNGI 97
Query: 195 YKFKTRKELFIAPEALHRPIVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 368
Y F + + C K L+ GN +P G+IV N+ ++ +
Sbjct: 98 YSF-----ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKAK 152
Query: 369 LARASGNFATVIGHNPDAKRTRVKLPS 449
R++G F ++ + VKLPS
Sbjct: 153 YLRSAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +2
Query: 557 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 652
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
Score = 39.9 bits (89), Expect = 0.062
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = +3
Query: 84 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD---PYKFKTRKELFIAPEALHRPI 254
R +D+ I G+V+ I +DP R A +A++ + D Y KT EL ++ + I
Sbjct: 37 RIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDKKYIIKT-NELEVSDK-----I 90
Query: 255 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 434
+ L+ GN + + GT++ E +G +R++G+ + +I N +
Sbjct: 91 ISSLNNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GI 148
Query: 435 VKLPSGAKKVLPSSNRGMVG 494
+KL SG KK + + +G
Sbjct: 149 IKLSSGIKKKISINCMATIG 168
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 667
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 569 RNCWPYVRGVAMNPVEHPHGGG 634
RN P VRGVAMNPV+HPHGGG
Sbjct: 190 RNKRPKVRGVAMNPVDHPHGGG 211
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 42.7 bits (96), Expect = 0.009
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 673
P VRGVAMNP++HPHGGG + G +V +
Sbjct: 196 PSVRGVAMNPIDHPHGGGEGKTSGGRPSVSK 226
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 667
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
Score = 36.7 bits (81), Expect = 0.58
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = +3
Query: 84 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEA-LHRPIVY 260
R +DY I G V + +DP R + +A++ + + +APE L ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGV-----MSYILAPEGLLVGDCIF 98
Query: 261 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 440
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 441 LPSGAKKVLPSSNRGMVGIVA 503
L SG + + S+ +G ++
Sbjct: 157 LKSGELRRVHSNCMATIGSIS 177
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +3
Query: 279 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 458
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 459 KVLPSSNRGMVGIVA 503
+ + +G+V+
Sbjct: 280 RYISLDCHATLGVVS 294
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 533 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 634
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 312 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 491
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 492 GIV 500
G V
Sbjct: 61 GQV 63
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 575 CW----PYVRGVAMNPVEHPHGGG 634
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +2
Query: 575 CW----PYVRGVAMNPVEHPHGGG 634
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.020
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 515 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 631
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/79 (26%), Positives = 41/79 (51%)
Frame = +3
Query: 267 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 446
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 447 SGAKKVLPSSNRGMVGIVA 503
S +++ + +G V+
Sbjct: 161 SKECRLISNECYATIGTVS 179
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 41.1 bits (92), Expect = 0.027
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = +3
Query: 129 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPVG 308
V ++ +DP R A +A+V + ++ E A + + V + + G+ P+G
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVIGRMAVSAKEGDAYPLG 136
Query: 309 AMPEGTIVCNLEEKMGDRGRLARASGNFATVI 404
A+P GT+V NLE + G RA+G ++
Sbjct: 137 ALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 40.7 bits (91), Expect = 0.035
Identities = 25/92 (27%), Positives = 44/92 (47%)
Frame = +3
Query: 129 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPVG 308
V ++ +DP R A +A+V + ++ E A + + V + G+ P+G
Sbjct: 111 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAGDVIKTSAVIGRMAVSANEGDAYPLG 170
Query: 309 AMPEGTIVCNLEEKMGDRGRLARASGNFATVI 404
A+P GT+V NLE + G RA+G ++
Sbjct: 171 ALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 40.7 bits (91), Expect = 0.035
Identities = 31/128 (24%), Positives = 60/128 (46%)
Frame = +3
Query: 120 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVM 299
K V+ + +D R A L ++F D K K +++ + I K+ G +
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYTKDTYIGNIINRIDSKSEFRNGFRL 132
Query: 300 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSN 479
+ +P GTI+ N+ + + +++GNFA +I D + ++KLPSG P ++
Sbjct: 133 LLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPITS 190
Query: 480 RGMVGIVA 503
+G ++
Sbjct: 191 LATIGSIS 198
Score = 39.5 bits (88), Expect = 0.082
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGG 631
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 40.3 bits (90), Expect = 0.047
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = -1
Query: 596 HHVHMASSYV*PCTCGMPFQLSK*VCQYVPSSNNTDHASVA*WQNLLGSRR*LYSCTLSI 417
HH+ +ASSY T L + +SNNT++ SV WQN L +RR L + T +
Sbjct: 17 HHIPLASSYASSTT-----SLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVL 71
Query: 416 RIVS--NHSGEVSR 381
R+ S N +V R
Sbjct: 72 RLASCQNDQSQVVR 85
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 39.9 bits (89), Expect = 0.062
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 500 CWR--GRIDKPILKAGRAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 637
CW G+I I R K +RN W P VRG+AMN HPHGGGN
Sbjct: 235 CWATIGQISN-IKHNERILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 39.5 bits (88), Expect = 0.082
Identities = 30/108 (27%), Positives = 49/108 (45%)
Frame = +3
Query: 126 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPV 305
+V +++ D R A +A+V D K+ E A + L G+ P+
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNEGDAYPL 166
Query: 306 GAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 449
GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 167 GALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.082
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 557 YKVKRNCWPYVRGVAMNPVEHPHGGG 634
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 288 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 464
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 465 LPSSNRGMVGIVAGGDVLTNLF*KLEGH 548
L + VG ++ D+ +F + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.14
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGG 631
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 661
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
Score = 35.9 bits (79), Expect = 1.0
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +3
Query: 213 KELFIAPEALHRPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 392
K L I I+Y G+ L++GN++P+ +P G+ + N+E + S
Sbjct: 98 KYLPITKNTKEGDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKIS 157
Query: 393 ATVIGHNPDAKRTRVKLPSGAKKVL 467
A +I K +KLPSG ++L
Sbjct: 158 AFLI--YIGKKYVTIKLPSGEIRLL 180
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 288 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 467
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +2
Query: 560 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 652
K RN W P VRG+ MNPV+HP+GGG + G
Sbjct: 210 KAGRNRWLGKRPRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 38.3 bits (85), Expect = 0.19
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +3
Query: 21 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 188
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 189 DPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 356
+ + T +AP + V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 587 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 703
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 38.3 bits (85), Expect = 0.19
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 506 RGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 661
R +++K I K K ++ P +RG AMN V+HPHGGG GKAS
Sbjct: 189 RRKVNKNIKKHAGFNRKLSIR----PKIRGAAMNAVDHPHGGGE----GKAS 232
Score = 36.3 bits (80), Expect = 0.76
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 264 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 443
G KA L++GN +P+ + G+ + N+E + +G L + + N +I D T VKL
Sbjct: 110 GFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKL 167
Query: 444 PSGAKKVL 467
PSG K+L
Sbjct: 168 PSGEIKLL 175
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 37.9 bits (84), Expect = 0.25
Identities = 26/97 (26%), Positives = 43/97 (44%)
Frame = -1
Query: 545 PFQLSK*VCQYVPSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQT 366
P LS Q P +H S + W NLL R L IR+V++ + ++ +
Sbjct: 50 PCTLSFMGAQEHPLWMKPNHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGED 109
Query: 365 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTIN 255
TSIT+ +F + GT + ++ + FL+ N
Sbjct: 110 TSITNVIFNVTDLGTFGSRAQGQNVIGNEGGFLTAAN 146
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.25
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 288 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 404
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.25
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 267 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 410
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 560 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 652
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.44
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 587 VRGVAMNPVEHPHGG 631
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 36.3 bits (80), Expect = 0.76
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGG 634
P VRGVAMN +HPHGGG
Sbjct: 400 PKVRGVAMNACDHPHGGG 417
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.76
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGG 631
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 35.9 bits (79), Expect = 1.0
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Frame = +3
Query: 6 RVRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF 185
R+R G G H ++ + LR + G + V + +DP R A +A+V
Sbjct: 90 RIRVHGIGGG-----HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAG 144
Query: 186 RDPYKFKTRKELFIAPEALHRPIVYCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDR 362
++ E A + + + G+ A G+ P+GA+P GT++ N+E + G
Sbjct: 145 GSRKRWIIATENMQAGDTILNSN-HIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRG 203
Query: 363 GRLARASGNFATVI 404
+ RA+G ++
Sbjct: 204 AQYIRAAGTCGVLL 217
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 557 YKVKRNCWPYVRGVAMNPVEHPHGG 631
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|Rep:
DNA gyrase subunit A - Leptospira interrogans
Length = 834
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 246 RPIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 425
RP V C K +GN P G + + ++ R L GNF ++ G NP A
Sbjct: 85 RPYVKCAKIVGEVIGNYHPHGDASVYEALVRMVQEFSLRVPLIDGQGNFGSIDGDNPAAY 144
Query: 426 R-TRVKLPSGAKKVL 467
R T +L A+++L
Sbjct: 145 RYTEARLEKVAEELL 159
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1
Query: 365 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTIN 255
T +TH + +AHNGTL S R +I+N + L+ ++
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVD 55
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRK 68
+RAQRKG GS+F SHT RK
Sbjct: 5 IRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 661
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 557 YKVKRNCWPYVRGVAMNPVEHPHGGG 634
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_Q08ZV6 Cluster: Major royal jelly protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Major royal jelly
protein - Stigmatella aurantiaca DW4/3-1
Length = 384
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2
Query: 610 RVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSPPATIPT-MPLLLDGRTFLAPDG 443
R HG Y+ A ++++ + R ++ SP T P P+ L G+T LAP+G
Sbjct: 182 RFHGRQAYLTDAGRPGIIVLNLDTGAARRVLDQSPFTTAPDDRPITLGGKTVLAPEG 238
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 174 VVHFRDPYKFKTRKELFIAPEALHRPIVYCGKKATLEVGNVMPVGAMPEG 323
V+H + + + +A V C KKATL V NV+P+ + PEG
Sbjct: 27 VIHAVPSWSCSHDEPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_UPI0000DD7B39 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 531
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 559 VLVVCPSSFQNRFVNTSPPATIPTMPLLLDG 467
+L V PS+ + R SPPA +P P LLDG
Sbjct: 492 LLAVLPSTPEGRCRQASPPARVPHSPFLLDG 522
>UniRef50_A1SQS0 Cluster: Putative uncharacterized protein
precursor; n=1; Nocardioides sp. JS614|Rep: Putative
uncharacterized protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 400
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -2
Query: 517 NTSPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEA 377
N P +PT LD RT DG TL RLA+G+ T A A
Sbjct: 219 NEGGPDEVPTYRCRLDDRTVACTDGLTTLRRLAAGMHRFTAASVDPA 265
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 7.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 333 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 467
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q0W1B8 Cluster: Archaeal specific
fructose-1,6-bisphosphatase/inositol-1- monophosphatase;
n=1; uncultured methanogenic archaeon RC-I|Rep: Archaeal
specific fructose-1,6-bisphosphatase/inositol-1-
monophosphatase - Uncultured methanogenic archaeon RC-I
Length = 271
Score = 33.1 bits (72), Expect = 7.1
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +3
Query: 207 TRKELFIAPEALHRPIVYCGKKATL---EVGN-VMPVGAMPEGTIVCN 338
TR+ A EAL ++ G KA + E+G ++P GAMPE T++C+
Sbjct: 40 TRRIDMAAEEALDEAVIREGLKARIISEEIGERIVPAGAMPELTLLCD 87
>UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1;
Streptomyces coelicolor|Rep: Putative DNA-binding
protein - Streptomyces coelicolor
Length = 303
Score = 32.7 bits (71), Expect = 9.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 578 WPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 712
WPY+R V + E GG +G +T +R SA + VG + A
Sbjct: 9 WPYIRSVRVRVGERTRAGGEFDLMG--TTTRRNASAMKMVGALLA 51
>UniRef50_Q1N8M6 Cluster: Extracellular solute-binding protein,
family 5; n=1; Sphingomonas sp. SKA58|Rep: Extracellular
solute-binding protein, family 5 - Sphingomonas sp.
SKA58
Length = 497
Score = 32.7 bits (71), Expect = 9.4
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 300 PVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS-GAKKVLPSS 476
P+GAM G C+ E D G + +V+G D K+ +LP AK +L S+
Sbjct: 17 PLGAMLLGLSACSKE----DSGLIV------VSVVGDRDDLKKPLQQLPDPAAKLLLEST 66
Query: 477 NRGMVGIVAGGDVLTNL 527
+G+V A GD++ L
Sbjct: 67 AQGLVAFDARGDIVPGL 83
>UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Glycosyl
transferase, family 2 - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 32.7 bits (71), Expect = 9.4
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +3
Query: 309 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM 488
A+PE T +CNL E D+G +A A+G V G N + + R +L +G + LP + +
Sbjct: 88 AVPEPTWLCNLSEAFKDQG-VAAATG---FVRGRNGISFQWRGRLVNGQSQTLPITTKSD 143
Query: 489 VGIVAG 506
++ G
Sbjct: 144 DPMIVG 149
>UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga
brevicollis|Rep: Ribosomal protein L29 - Monosiga
brevicollis
Length = 337
Score = 32.7 bits (71), Expect = 9.4
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Frame = +2
Query: 533 KAGRAYHKYKVKR--------NCWPYVRGVAMNPVEHPHGG 631
K HKY++K N P VRG A NPV+HP GG
Sbjct: 271 KVSNELHKYEIKGKAGTNRLLNNRPKVRGKAQNPVDHPMGG 311
>UniRef50_A6R0K7 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 325
Score = 32.7 bits (71), Expect = 9.4
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 383 WKLRHCDWTQS*C*AYKSKATVWSQEGSAIKQQRHGRYCCWR 508
W L H DWT K +WS E S I R G Y WR
Sbjct: 48 WCLDHQDWTLE-----DWKRVIWSDEASVILLHRRGGYRIWR 84
>UniRef50_Q9YEB8 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 456
Score = 32.7 bits (71), Expect = 9.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 517 NTSPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRP-LSPIFSS 341
+T PP T + + +GR AP G ++ G CP + ++ EA P ++ S
Sbjct: 189 STLPPCTFNNIDMA-EGRVAAAPAGPDPVLAGFRGDCPHLLPRYSEALCEEPHFWVLYRS 247
Query: 340 RLHTMVPSGI 311
HT P G+
Sbjct: 248 NQHTDAPRGL 257
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,350,093
Number of Sequences: 1657284
Number of extensions: 17555927
Number of successful extensions: 49647
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 47575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49588
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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