Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00680
(719 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 281 1e-77
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 27 0.77
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 1.0
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.1
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.1
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 24 4.1
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 4.1
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 24 5.4
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 24 5.4
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 281 bits (690), Expect = 1e-77
Identities = 129/168 (76%), Positives = 148/168 (88%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 VRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 188
+RAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FR
Sbjct: 5 IRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFR 64
Query: 189 DPYKFKTRKELFIAPEALHR-PIVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 365
DPY+F+ K+LFIA E ++ VYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG
Sbjct: 65 DPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRG 124
Query: 366 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGG 509
+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGG
Sbjct: 125 KLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGG 172
Score = 150 bits (363), Expect = 5e-38
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2
Query: 509 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 688
GRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGT G
Sbjct: 173 GRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPG 232
Query: 689 RKVGLIAARR 718
RKVGLIAARR
Sbjct: 233 RKVGLIAARR 242
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 26.6 bits (56), Expect = 0.77
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 473 KQQRHGRYCCWRG 511
+QQ+HG++CC RG
Sbjct: 280 QQQQHGQHCCCRG 292
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 1.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 608 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQYVPSSNNT 492
GS H SSYV CG P ++ C++ P+S +T
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH-PASRST 541
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 105 RHGYIKGVVKDIIHDP 152
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 105 RHGYIKGVVKDIIHDP 152
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 288 QLQELLSFHNKQLACVELRE 229
+L E++ H K L CVEL E
Sbjct: 241 ELIEIIVMHQKALKCVELLE 260
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.2 bits (50), Expect = 4.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -1
Query: 320 LRHSSNRHHISNFKSCFLSTINNWPV*SFGSNEELLP 210
L HS H +NF S N WP FG+ LP
Sbjct: 48 LPHSQYGAHSANF-----SAQNGWPTDGFGTTHTQLP 79
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 23.8 bits (49), Expect = 5.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 170 GCCTLPRSIQVQDKEGALHCSRSSTQ 247
GCC LP + Q K+ + + + +T+
Sbjct: 16 GCCALPANTNAQTKQDSSNNNNRTTE 41
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 231 PEALHRPIVYCGKKATLEVGNVMPVGAMPE 320
P A ++ I+Y + A L+V V AMPE
Sbjct: 190 PSAPNQQIIYKEQTANLQVQKVPAFQAMPE 219
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,232
Number of Sequences: 2352
Number of extensions: 19217
Number of successful extensions: 45
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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