Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00678
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.64 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   1.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   1.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 623 YTMLLMFVVHLIIIVCRIY 679
           Y   ++F VHL+++VC  Y
Sbjct: 242 YYAFILFTVHLLLLVCIYY 260



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 623 YTMLLMFVVHLIIIVCRIY 679
           Y   ++F VHL+ ++C  Y
Sbjct: 117 YYAFIIFTVHLLFLLCIYY 135



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +2

Query: 587 IPYLF*D*FLVLYTMLLMFVVHLIIIVC 670
           +P  F       Y   ++F VHL+ ++C
Sbjct: 138 VPLFFLLCIYYFYCAFIIFTVHLLFLLC 165



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 617 VLYTMLLMFVVHLIIIVCRIY 679
           +++T+ L+F   LII++C  Y
Sbjct: 220 IIFTIHLLFYCVLIILLCIYY 240


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 426 VIKNKIYVYF*CKTTIDSFNQSYSWKVCIQL*FHKIKII 310
           VIK +IY     + T+D FN  + W   + + F  ++I+
Sbjct: 180 VIKAQIYSL---RETVDVFNDIFGWPFLLLITFTSLQIM 215


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 426 VIKNKIYVYF*CKTTIDSFNQSYSWKVCIQL*FHKIKII 310
           VIK +IY     + T+D FN  + W   + + F  ++I+
Sbjct: 180 VIKAQIYSL---RETVDVFNDIFGWPFLLLITFTSLQIM 215


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -3

Query: 426 VIKNKIYVYF*CKTTIDSFNQSYSWKVCIQL*FHKIKII 310
           VIK +IY     + T+D FN  + W   + + F  ++I+
Sbjct: 500 VIKAQIYSL---RETVDVFNDIFGWPFLLLITFTSLQIM 535


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 629 MLLMFVVHLIIIVCRIYVSS 688
           +LLMF  H I IV  I+  S
Sbjct: 237 LLLMFTSHFIFIVVSIFYMS 256


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 20  GVYGIRNTKPALVGVTP 70
           G++ I+NT+P +  V P
Sbjct: 75  GIFPIKNTEPGMFRVAP 91


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 505 YFIVD*NYMFLVIIMNK*IKRALCLISYSLSFLRLVS 615
           YFI+   +  + I+    +K A  LIS++L  +RL+S
Sbjct: 175 YFIIIQLFGSMKIVKGT-LKTAYYLISFALLIMRLIS 210


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 390 KTTIDSFNQSYSW 352
           K TID+FN  + W
Sbjct: 268 KVTIDAFNDIFGW 280


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 390 KTTIDSFNQSYSW 352
           K TID+FN  + W
Sbjct: 194 KVTIDAFNDIFGW 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,279
Number of Sequences: 336
Number of extensions: 3057
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)