Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00676
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 38 0.009
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 30 1.4
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 30 1.4
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 30 1.4
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 30 1.4
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 30 1.4
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 28 5.7
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 7.5
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 7.5
U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical p... 28 7.5
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 537
G+ + SD G GNG+++ NGD GE+ N + + + NG+ G++
Sbjct: 255 GEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEA 311
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRAD 528
G+ + +SD G + N +++ NG+ GE+ N + + NG++ G+ +
Sbjct: 303 GEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNGEESEN 362
Query: 527 KFSLGVKF 504
+G+KF
Sbjct: 363 GEEIGLKF 370
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 680 SDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
SD G GNG+++ NGD GE+ N + + + NG+ G+
Sbjct: 216 SDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGE 262
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 537
G+ G +SD G + NG+++ NG+ E+ N + + NG+ G G++
Sbjct: 219 GEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEA 275
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRAD 528
G+++ SD ++ NG+ + NG++ GE N + + + NG+ G+
Sbjct: 309 GEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNGEESENGEEIGL 368
Query: 527 KFSL 516
KFS+
Sbjct: 369 KFSV 372
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 537
G+++ SD G + N +++ NG++ GE N ++ + NG+ G G++
Sbjct: 171 GEASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGEA 227
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGD 558
G+ + +SD G + NG+ + NG+ GE+ N D + + NG+
Sbjct: 243 GEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGE 292
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRAD 528
G+ + G ++ NGD + NG++ GE N ++ + NG+ G+ R +
Sbjct: 213 GEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGN 272
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSR 534
G+ + +SD G + NG+++ NG+ E+ N + + + NG+ G+ R
Sbjct: 291 GEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEER 348
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+++ SD G ++ NG+ + N ++ GE N + + NG++ GD
Sbjct: 225 GEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGD 280
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 537
GD + +SD G + N +++ NG+ GE N + + NGD G++
Sbjct: 231 GDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEA 287
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 537
GD + +SD G + N +++ NG+ GE+ N + + + NG+ G++
Sbjct: 279 GDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEA 335
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -3
Query: 683 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRAD 528
+SD G + NG+ + N ++ GE+ N + + + NG+ G+ R +
Sbjct: 173 ASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGN 224
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 537
G+ + +SD G ++ NG+ + N ++ GE N + + NGD G++
Sbjct: 183 GEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESDNGEA 239
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+++ SD ++ NG+ + NG+ GE N ++ + NG++ G+
Sbjct: 237 GEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGE 292
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+++ SD ++ NG+ + NG++ GE N ++ + NG++ G+
Sbjct: 285 GEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGE 340
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGD 558
G+++ SD ++ NG+ + NG+ GE+ N D + + NG+
Sbjct: 195 GEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESDNGEASDNGE 244
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+ + G ++ NGD + NG++ GE N ++ + NG++ G+
Sbjct: 261 GEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGE 316
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 683 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
+SD G + N +++ NG+ GE N ++ + NG++ G+
Sbjct: 197 ASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESDNGEASDNGE 244
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+ + +SD G + NG+ NG++ G+ N ++ + N ++ G+
Sbjct: 201 GEESDNEEASDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGE 256
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+ + SD G ++ NG+ + NG+ E+ N ++ + N ++ G+
Sbjct: 159 GEESDNEIESDNGEASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGE 214
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+ + SD ++ NG+++ NG+ E+ N + + NG++ GD
Sbjct: 177 GEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGD 232
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
G+++ SD G ++ NG+ + N ++ GE N ++ + N ++ G+
Sbjct: 273 GEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGE 328
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = -3
Query: 701 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 531
S G S SS G + GDS+ + S G SDS + S S G S G GD+ A
Sbjct: 366 SGGDSSSSSGGGYSSGGDSSSSSSS--SGGYSGGSDSSSSSSSSSGGYSSGGGDAGA 420
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = -3
Query: 701 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 531
S G S SS G + GDS+ + S G SDS + S S G S G GD+ A
Sbjct: 366 SGGDSSSSSGGGYSSGGDSSSSSSS--SGGYSGGSDSSSSSSSSSGGYSSGGGDAGA 420
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 704 DSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLER-AGSVSNGDSVGRGDSRAD 528
D G+S SS KGH + +GDS NG++ RNS ++E A S+ S + D
Sbjct: 93 DDNGSS-SSKKGHPSEDGDSTRNGET---PTDRRNSGAIEETADGESSAQSAAEKKNSGD 148
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 704 DSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLER-AGSVSNGDSVGRGDSRAD 528
D G+S SS KGH + +GDS NG++ RNS ++E A S+ S + D
Sbjct: 268 DDNGSS-SSKKGHPSEDGDSTRNGET---PTDRRNSGAIEETADGESSAQSAAEKKNSGD 323
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 704 DSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLER-AGSVSNGDSVGRGDSRAD 528
D G+S SS KGH + +GDS NG++ RNS ++E A S+ S + D
Sbjct: 93 DDNGSS-SSKKGHPSEDGDSTRNGET---PTDRRNSGAIEETADGESSAQSAAEKKNSGD 148
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 704 DSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLER-AGSVSNGDSVGRGDSRAD 528
D G+S SS KGH + +GDS NG++ RNS ++E A S+ S + D
Sbjct: 268 DDNGSS-SSKKGHPSEDGDSTRNGET---PTDRRNSGAIEETADGESSAQSAAEKKNSGD 323
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 704 DSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLER-AGSVSNGDSVGRGDSRAD 528
D G+S SS KGH + +GDS NG++ RNS ++E A S+ S + D
Sbjct: 268 DDNGSS-SSKKGHPSEDGDSTRNGET---PTDRRNSGAIEETADGESSAQSAAEKKNSGD 323
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 21/56 (37%)
Frame = -3
Query: 707 GDSTGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGD 540
GD KG GD +G+ +G + D E+ SNG +GD
Sbjct: 127 GDKGAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGD 182
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 AREKVEDFRYKVEEYKKVESDIXXXXXXXXXXXXXXXXXQINNPN---PEETSETKSVED 173
A+++ ED + +VEE K++E + N+ PEE + K +
Sbjct: 53 AKQEKEDDKKEVEEKKEIEKSVEAKVEGKVKAKVESTQNTDNSQELKAPEEKPKKKKKKK 112
Query: 174 FNVAANAMVETEAITPE 224
N+ +A VE +I PE
Sbjct: 113 SNLIVSASVEKLSIVPE 129
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 SSPAKEFELFANSPKPSETLLPKKIYLPENPLYQLNHHCSL 574
+SP +++L ++ P P L K I+ P +P ++L L
Sbjct: 9 ASPFGDYDLPSDEPSPKYQKLNKNIFSPLSPTFELKFQSKL 49
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 650 DSAWNGDSIWRGESERNSDSLERAGSVSNGD-SVGRGDSRADKFSLGVKF 504
DSA++ GES R +++RA +S+ D VG GD R D L F
Sbjct: 195 DSAFDSYCQSAGESYRRYQAIKRALRLSHADGGVGIGDERQDAEDLPTIF 244
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 452 SSPAKEFELFANSPKPSETLLPKKIYLPENPLYQLNHHCSL 574
+SP +++L ++ P P L K I+ P +P ++L L
Sbjct: 9 ASPFGDYDLPSDEPSPKYQKLNKNIFSPLSPTFELKFQSKL 49
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 707 GDSTG-TSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 531
GD G + G AGNG+ A G+ G N AG+ NG+ G GD+ A
Sbjct: 843 GDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNG-----AGA-GNGNGAGAGDASA 896
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 707 GDSTG-TSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 531
GD G + G AGNG+ A G+ G N AG+ NG+ G GD+ A
Sbjct: 820 GDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNG-----AGA-GNGNGAGAGDASA 873
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 707 GDSTG-TSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 531
GD G + G AGNG+ A G+ G N AG+ NG+ G GD+ A
Sbjct: 473 GDGNGGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNG-----AGA-GNGNGAGAGDASA 526
>U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical
protein F46H5.2c protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +1
Query: 580 ALSKESLLRSDSPLHIESPFHAESPLPA---ECP--LSDEHDVPVESP 708
A S S++ S SP+HA+SPL A + P LS E D P+ P
Sbjct: 48 ATSISSVISEQSEAFRNSPYHAQSPLSAVLFQRPDFLSSEGDRPMSYP 95
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +1
Query: 580 ALSKESLLRSDSPLHIESPFHAESPLPA---ECP--LSDEHDVPVESP 708
A S S++ S SP+HA+SPL A + P LS E D P+ P
Sbjct: 48 ATSISSVISEQSEAFRNSPYHAQSPLSAVLFQRPDFLSSEGDRPMSYP 95
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -3
Query: 707 GDSTGTSCS----SDKGHSAGNGDSAWNGDSIWRGESERNSDSLER 582
G++ G C+ ++ G+ GN NG W G + N+++ R
Sbjct: 387 GNNDGCGCNRRGGNNNGNRGGNSQECGNGGCPWNGNNNNNNNNGNR 432
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 126 NNPNPEETSETKSVEDFNVAANAMVETEAITPE---PTYDKENVVA 254
N+ +TKS+ D ++ E + PE P +D+EN+ A
Sbjct: 722 NDSEQNSKLDTKSITDETTVKDSPSTEETVIPEKPKPAFDRENIAA 767
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,397,502
Number of Sequences: 27780
Number of extensions: 284343
Number of successful extensions: 1379
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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