Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00675
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.84 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.8  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 132 PHGSTFRLGADSGRFSQCCSRPPCEQR 212
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 279 KDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYA 434
           KD ++   D++   P+   + +  G   V G+ EEK  ++  +    TRR A
Sbjct: 83  KDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRRLA 134


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 528  TAGGTFLVRLQTTHHLKTAGTPQIQPYSP 442
            T  G F +R  TT+H++     +I    P
Sbjct: 954  TEAGVFTLRPATTYHIRIVAENEIGSSEP 982


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 104 LITKLSVLVASWINISAWG*LRKIFSVL 187
           ++  LSV+ +S+++I+ W  L K F  +
Sbjct: 484 VLNLLSVIKSSFLDINTWKMLVKSFDAI 511


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 536 HPPLLAAPSWCDYRQ 492
           H PLLA PS+  + Q
Sbjct: 365 HMPLLADPSFAQFSQ 379


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 347 GRLHRG*RQTRGEERSAWLHIASIHSSLRFAGGLY 451
           G  H G  ++     +AW  + S  S L  +GG++
Sbjct: 172 GATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMH 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,768
Number of Sequences: 336
Number of extensions: 3189
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)