Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00675
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   115   1e-27
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    27   0.60 
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.4  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   4.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.4  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  115 bits (277), Expect = 1e-27
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +3

Query: 258 GSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYAL 437
           GS++   KDKFQ+NLDVQ F+PEEISVK  D  ++VEGKHEEK+D HGY+SR F RRY L
Sbjct: 5   GSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYML 64

Query: 438 PEGCTAESVESRLSSDGVLSVIAP 509
           P+G     + S LSSDG+L++  P
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCP 88


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 26.6 bits (56), Expect = 0.60
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +3

Query: 138 GSTFRLGADSGRFSQCC-SRPPCEQRILPPVASPCCRGSRLGSSIKSDKD 284
           G  F    D+  F +C  +R P       P   PC    RLGS  KS  D
Sbjct: 53  GERFCTLCDTRHFCECKETREPLPYMYACPGTEPCQSSDRLGSCSKSMHD 102


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 150 RLGADSGRFSQCCSRPPCEQRILPPVASPCCRGSRLG 260
           R+     +FSQ   +  CEQ+ LP V S  C G++ G
Sbjct: 347 RMAKSKRKFSQ---QNCCEQQHLPHVHSEKCAGTQTG 380


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 210 RILPPVASPCCRGSRLGSSIKSDKD 284
           R L PVASP CR  R    + S K+
Sbjct: 153 RPLEPVASPVCRMMRANVRVLSWKE 177


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
 Frame = +3

Query: 306 VQHFAPEEISVKTADGYIVVEGKH---------EEKKDQHGYISRQFTRRYALPEGCTAE 458
           ++ + PEE +V  ++ + +V+G+          E + ++  Y S    +  +     ++ 
Sbjct: 68  IEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSF 127

Query: 459 SVESRLSSDGVLSV--IAPGRCRQQWRVNARFR 551
              S  S  G  S+  I+P R   + R+N  FR
Sbjct: 128 QQSSYESESGAGSIVQISPQRVSLKLRLNEAFR 160


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 402 YISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 509
           Y+S +F     +P+GC    +   L  + V +V+ P
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPP 696


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,177
Number of Sequences: 2352
Number of extensions: 13715
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)