Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00670
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.4  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 312 LNLLFSECNPVRSQWAKSDNAVV 244
           +NL+F+ C  V S W +  + ++
Sbjct: 64  VNLIFNTCGEVFSAWVRCQDQIL 86


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/28 (25%), Positives = 12/28 (42%)
 Frame = +3

Query: 213 RHCIFNMRFCEQLHCHFSPIASEPDYIL 296
           R C +  ++C  L  H       P+ +L
Sbjct: 290 RDCSYATKYCHSLKIHLRRYGHTPNVVL 317


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 197 SFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 75
           SF K ++++      P   I   D    HF    +R  +TI
Sbjct: 36  SFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGYTI 76


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 197 SFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 75
           SF K ++++      P   I   D    HF    +R  +TI
Sbjct: 36  SFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGYTI 76


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 197 SFLKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTI 75
           SF K ++++      P   I   D    HF    +R  +TI
Sbjct: 36  SFAKVVILAQIFGFFPAQGILGRDFRAIHFTWASARVGYTI 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,382
Number of Sequences: 336
Number of extensions: 3001
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)