Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00670
(623 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51800.2 68416.m05681 metallopeptidase M24 family protein sim... 85 5e-17
At3g51800.1 68416.m05680 metallopeptidase M24 family protein sim... 85 5e-17
At5g58890.1 68418.m07378 MADS-box family protein various predict... 31 0.47
At3g59990.2 68416.m06698 methionyl aminopeptidase, putative / me... 31 0.47
At3g59990.1 68416.m06697 methionyl aminopeptidase, putative / me... 31 0.47
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 31 0.47
At5g28650.1 68418.m03508 WRKY family transcription factor DNA-bi... 29 1.9
At3g04670.1 68416.m00500 WRKY family transcription factor simila... 29 1.9
At3g06350.1 68416.m00733 dehydroquinate dehydratase, putative / ... 29 3.3
At1g65620.1 68414.m07443 LOB domain protein 6 / lateral organ bo... 28 5.8
At5g55690.1 68418.m06943 MADS-box protein (AGL47) 27 7.7
At4g12360.1 68417.m01954 protease inhibitor/seed storage/lipid t... 27 7.7
>At3g51800.2 68416.m05681 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 401
Score = 84.6 bits (200), Expect = 5e-17
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 10 EKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 189
EKE+ T E VVTKYK A +IVN+ L+ V+A+C P A +ICE GD + E+T ++
Sbjct: 9 EKELSLTSPE--VVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKEQTASMY 66
Query: 190 KKEKDS-KKGIAFSTCVSVNNCIVTFRPLRAN 282
K K ++G+AF TC+SVNN + F PL ++
Sbjct: 67 KNSKKKIERGVAFPTCISVNNTVGHFSPLASD 98
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +3
Query: 258 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAADV 413
HFSP+AS+ + +L+ GD+ KID+G HIDGFIA+V HT V+ E +SGR ADV
Sbjct: 91 HFSPLASD-ESVLEDGDMVKIDMGCHIDGFIALVGHTHVLQEGPLSGRKADV 141
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 454 LLKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIITKSIRST 615
L++PG +N VTEAIQK++A Y CK +EG+LSHQLKQ IDG K +++ S T
Sbjct: 155 LVRPGKKNTDVTEAIQKVAAAYDCKIVEGVLSHQLKQHVIDGNKVVLSVSSPET 208
>At3g51800.1 68416.m05680 metallopeptidase M24 family protein
similar to SP|P50580 Proliferation-associated protein
2G4 {Mus musculus}; contains Pfam profile PF00557:
metallopeptidase family M24
Length = 392
Score = 84.6 bits (200), Expect = 5e-17
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 10 EKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVF 189
EKE+ T E VVTKYK A +IVN+ L+ V+A+C P A +ICE GD + E+T ++
Sbjct: 9 EKELSLTSPE--VVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKEQTASMY 66
Query: 190 KKEKDS-KKGIAFSTCVSVNNCIVTFRPLRAN 282
K K ++G+AF TC+SVNN + F PL ++
Sbjct: 67 KNSKKKIERGVAFPTCISVNNTVGHFSPLASD 98
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +3
Query: 258 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAADV 413
HFSP+AS+ + +L+ GD+ KID+G HIDGFIA+V HT V+ E +SGR ADV
Sbjct: 91 HFSPLASD-ESVLEDGDMVKIDMGCHIDGFIALVGHTHVLQEGPLSGRKADV 141
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 454 LLKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQFRIDGEKSIITKSIRST 615
L++PG +N VTEAIQK++A Y CK +EG+LSHQLKQ IDG K +++ S T
Sbjct: 155 LVRPGKKNTDVTEAIQKVAAAYDCKIVEGVLSHQLKQHVIDGNKVVLSVSSPET 208
>At5g58890.1 68418.m07378 MADS-box family protein various predicted
proteins, Oryza sativa and Arabidopsis thaliana
Length = 294
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 187 FKKEKDS--KKGIAFSTCVSVNNCIVTFRPLRANRITF*KKEI*PR 318
+KK K S KK FST V C++ + P +A + + EI P+
Sbjct: 21 YKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWPK 66
>At3g59990.2 68416.m06698 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 258 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 371
H++P + + +L+ D+ K+D G HIDG I A TV
Sbjct: 192 HWTPNSGDKT-VLQYDDVMKLDFGTHIDGHIIDCAFTV 228
>At3g59990.1 68416.m06697 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to Methionine aminopeptidase 2 (EC
3.4.11.18) from {Rattus norvegicus} SP|P38062, {Homo
sapiens} SP|P50579; contains Pfam profile PF00557:
metallopeptidase family M24; supporting cDNA
gi|11344921|gb|AF300880.1|AF300880
Length = 439
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 258 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 371
H++P + + +L+ D+ K+D G HIDG I A TV
Sbjct: 192 HWTPNSGDKT-VLQYDDVMKLDFGTHIDGHIIDCAFTV 228
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 258 HFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 371
H++P + + +L+ D+ K+D G HIDG I A TV
Sbjct: 194 HWTPNSGDKT-VLQYDDVMKLDFGTHIDGHIVDSAFTV 230
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +1
Query: 4 TSEKEVEKTIAEDLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNK 183
TSE++ E + + + A ++ +V + + + P ++CE LE T +
Sbjct: 114 TSEEKREMERLQKPIYNSLRQAAEVHRQVRKYMRSILKPGMLMIDLCE-----TLENTVR 168
Query: 184 VFKKEKDSKKGIAFSTCVSVNNCIVTFRP 270
E + GIAF T S+NN + P
Sbjct: 169 KLISENGLQAGIAFPTGCSLNNVAAHWTP 197
>At5g28650.1 68418.m03508 WRKY family transcription factor
DNA-binding protein WRKY3, parsley, PIR:S72445
Length = 330
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 286 SGSLAMGEK*QCSCSQKRMLKMQ 218
SGSL G K +C CS+KR L+++
Sbjct: 223 SGSLKCGSKSKCHCSKKRKLRVK 245
>At3g04670.1 68416.m00500 WRKY family transcription factor similar
to elicitor response element binding protein WRKY3
isolog GB:AAB63078 [Arabidopsis thaliana]
Length = 330
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 295 RM*SGSLAMGEK*QCSCSQKRMLKMQ 218
+M SGSL G + +C CS+KR L+++
Sbjct: 220 KMCSGSLKCGSRSKCHCSKKRKLRVK 245
>At3g06350.1 68416.m00733 dehydroquinate dehydratase, putative /
shikimate dehydrogenase, putative similar to
dehydroquinate dehydratase/shikimate dehydrogenase
[Nicotiana tabacum][GI:535771], dehydroquinate
dehydratase/shikimate:NADP oxidoreductase [Lycopersicon
esculentum][GI:3169883]
Length = 603
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 261 SDNAVVHRNAC*KCNAFLGVF--LLFENLVSLLQYKFIAKFTYFSC 130
S + +VH A K F GV+ LL +NLVS LQ + F FSC
Sbjct: 336 SKSPIVHNQAF-KSVDFNGVYVHLLVDNLVSFLQAYSSSDFAGFSC 380
>At1g65620.1 68414.m07443 LOB domain protein 6 / lateral organ
boundaries domain protein 6 (LBD6) / asymmetric leaves2
(AS2) identical to SP|O04479 LOB domain protein 6
(ASYMMETRIC LEAVES2) {Arabidopsis thaliana}
Length = 199
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 517 YGCKPIEGMLSHQLKQFRID 576
YGC + +L HQL+Q +ID
Sbjct: 82 YGCVGVISLLQHQLRQLQID 101
>At5g55690.1 68418.m06943 MADS-box protein (AGL47)
Length = 277
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 187 FKKEKDS--KKGIAFSTCVSVNNCIVTFRPLRANRITF*KKEI*PR 318
+KK K KK FST V+ C++ + P RA + E+ P+
Sbjct: 21 YKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVMEPELWPK 66
>At4g12360.1 68417.m01954 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 161
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 191 LKTLLVSSNTSLSPNSHISLADASGTHFAMTCSRTRFTICPA 66
L TLLV++ T HI LA + + AM C+ PA
Sbjct: 11 LATLLVAATTVSGQGPHIPLAPSPSVNEAMNCAAGLAVCLPA 52
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,067,045
Number of Sequences: 28952
Number of extensions: 255428
Number of successful extensions: 796
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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